Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            <-------GAMYB  --------------->AGL15                                                         <---------MYB46(3)                                                         --------->MYB111(2)    ----------->GT1                                     <--------P       <---------------AGL15 <---------REM1(1)                                     <-------GAMYB    ----------------->AGL2 ---------TOE2(3)                            ------->TEIL--------->MYB55(2)        <---------MYB46(3) ---CCA1(1)                  --------->At5g28300  <----------DOF2       ----------------->AGL3    <-- ---RVE1(1)                 ----------->GT1 --------->ARR14(2)        <-----------GT1 <-----------GT1 --ARR11(3)                ----------->GT1  <---------ARR14(2)   --------->ATHB12<-------GAMYB   ---- ->ARR11(3)           <---------YAB1      ----------->ARR10    <---------WOX13(1)<---------At4g35610   ttgatgtagaaaatttggaatgtgatgagagggtaaatgaagtgaagaacctctttgggttgttgaatgattttcccatattcagttgttacgacttggc  16428500                                             <---------ANAC58                                      <---------WOX13(1) <-------TEIL                                   <---------YAB1---------->ID1                                 --------->CCA1(2)  ------>ZmHOX2a(1)                        --------->bZIP60(1)  <---------ANAC58                        <---------ANAC46  <---------GLK1(1)                        --------->ANAC55(2)<---------ARR11(3)        <---------ALFIN1             --- -------RAP2.6(3)       <---------ANAC55(2)--------->ARR11(3)<---------DAG2      --------->ANAC46 --- ----->RAP2.6(2)       <---------TOE2(3)  <---------CCA1(2)  <----------DOF2    <-------TEIL      ---   cgtcttccttcacatactcgaatttgacgtaagtgatacgattgatatcttgtcctacatacacttttcttacaccctcatatacatcatcgtcccattc  16428600                                          <-----------GT1                                     --------->ARR11(3)                                     --------->ARR14(2)                                     <---------ARR11(3)                                     <---------GLK1(2)                                  <--------P                                 <---------MYB52(1)           --------->DEAR3(1)   --------->LBD16           --------->AtMYB61   --------->HSFB2a(2)           <---------ALFIN1    <---------HSFB2a(2)          --------->MYB46(3)  <---------LBD16        --------->REM1(1)    --------->MYB52(1)                                --------->AHL20(2)      ------>ZmHOX2a(1)   --------->At4g35610                                  <---------AHL20(2) --------->DEAR3(1)       <---------At4g35610                       --------->At5g28300 ------>ANAC58        <-----------HVH21   --------->ANAC46         ----------->GT1                 -- ------>ANAC46     <---------ANAC58  <---------ARR14(2)            <---------ZAT6   <-----------GT1<- ------>ANAC58     <---------ANAC58----------->ARR10    <---------AHL20(2)   ------->TEIL    <-------   acgccctccttcaccaccgtagcctgtcaacttccggtagattttcgccattttgtattttttcaaatactgtaaaatgaattttttaactaaattatcc  16428700                                                                <------MYB83                                                                ----------->GT1                                                        ------>ZmHOX2a(2)                                                       <------ZmHOX2a(2)                                                      <---------ARR11(3)                                                      --------->GLK1(2)                                                      <---------ARR14(2)                                                      <---------ARR11(1)                                                      --------->ARR14(2)                                                      <---------AGP1                                                     <---------CCA1(2)                                                     <---------ARR14(1)                                                    --------->LBD16                                                   --------->LBD16                                                  <---------LBD16              --------->ARR14(2)                 ------>ZmHOX2a(2)              <---------ARR14(2)            --------->LBD16     <------MYB46(1)           ----------->GT1      <---------ICU4  <------ZmHOX2a(2)       ---------->DOF2         <---------YAB1  <---------ARR14(2) ----------------->AGL3        --------->ICU4<------NtERF2    <---------WOX13(1) ------->ARR14(2)             <---------TOE2(3)--------->ARR14(2)                               ----- --------ARR14(2)            --------->YAB1<---------LBD16  --------->ATHB12                    ----- ----GT1--------->DAG2  <----------DOF2   <---------LBD16  <---------YAB1          <---------AHL20(2)   aaatccaaataaagtgtatattcaagctttataatgtttactaagccgggatcccggatctgtgattggtgatacactagcctattgaattgcatagcaa  16428800                                    --------->ANAC58                                    --------->ANAC46                       --------------->AtSPL8                       <---------ICU4                       <---------------AtSPL8   ----------->GT1                      <---------ATHB12     ---------->DOF2                      --------->ICU4--------->ANAC55(2)           <---------ATHB12       <-----------GT1           --------->ICU4    <---------MYB59<---------TOE2(3) ---->ANAC58      <---------MYB52(2)--------->ANAC58                --------->YAB1                --- ---->ANAC58--------->YAB1  <-----------------AGL1     ----------->GT1 --------->ARR11(3)      ------   gacatagagagcaatgatcaactaatgagtacctatttacgaaactaaagttgtaatttgtataaacaaatcagaacttgagagagagagaagagagaac  16428900                                                                                             <-------                                                                                             --------                                                                                             <-------                                                             ------------>CBF                --------            ============================HOX2a_HOX2a    <------------CBF                      <-------          --------->ARR11(3)   <---------TOE2(3)      <---------AHL20(2)                    ---------          <---------ARR11(3)   <---------ANAC55(2)    --------->ATHB12     ------->MYC3     <-------- -------->GT1     --------->YAB1 <------ZmHOX2a(1)   --------->AHL20(2)    <-------MYC3     <-------- --->GLK1(2)------>ZmHOX2a(2) *TSS                  <-----------TBP     <---------ALFIN1------------>CBF   ctgtaaattcttgatcttattcagaatgaaattaaggaactatcaactatgtctatttattgatacaatttggaacacgtttttgttgattccaataatt  16429000                                    <---------DAG2                                    <----------DOF2                                   <---------DAG2                              <---------WOX13(1)                            --------->ATHB12   <---------YAB1           <---------ICU4 --AHL20(2)                --------->ICU4 ->AHL20(2)                <---------YAB1                   --------------->AGL15 -ATHB1                  --------->YAB1                     <---------------AGL15 ->ATHB51                <---------ICU4                     ========================================= --ICU4                 <---------ATHB12 --------------->AtSPL8 >ICU4           <-----------GT1<---------WRKY18(1)   <---------DAG2 -ATHB12      <---------REM1(1) <-----------GT1       <----------DOF2 --------->GLK1(2) -ATHB51      ----------->GT1<------------CBF    <----------DOF2 ---------->DOF2          <----------   tagttatacttgtaagttgtaactaaatcatgattgacctttttctgttccctttacttttccttcaaaaagaatatgagaaggaaaacattttacaagg  16429100                                                                            ====================HOX2a_HOX2a                                                                            ------>ZmHOX2a(2)                                                                           =====================HOX2a_HOX2a                                                                           <------ZmHOX2a(2)                                                                 <---------AHL20(1)             --------->ATHB51                                    --------->AHL20(2)          --------------->AGL15                                  <---------AHL20(2)          <---------------AGL15                                  <---------ARR11(3)         --------->LBD16                                         --------->AHL20(1)     ------>MYB83----------->GT1                                 --------->ARR11(3)      ------>ZmHOX2a(1)     --------->ARR14(2)                                         --------->AHL20(2)   <---------ARR14(2)   --------->AtMYB61                                    -------->P        <---------ARR11(3) =========================MADS_MADS                    --------->MYB52(1) --------->ARR11(3)   <----- -GT1------>MYB46(1)   <---------AHL20(2)            <---------MYB52(2)  <---------GLK1(1)    <------NtERF2   ccaaaccaatccccataatttgtaatttaagtcatattagaagagaaatagccaaactaacccaaaatatattagagatctcaagagcatcctggctgca  16429200                           =============================bZIP_DOF                      --------->ANAC58                      <---------O2                      --------->O2                      ==================================bZIP_DOF                      --------->ANAC58                      --------->ANAC55(2)                      --------->TGA1a                      <---------ANAC55(2)                                                 <----------              --------->ARR14(2)                          --------->ARR11(3)         --------->YAB1        --------->HSFB2a(2)<---------TGA1a     --------->ANAC58                --------->ZAT6        <---------HSFB2a(2)<---------O2        --------->ANAC58              <--------ATHB1   --------->YAB1     <---------TGA1a         --------->DAG2                <---------ATHB12  <---------YAB1  <-----------HVH21          ---------->DOF2   --------->YAB1--------->YAB1         < ----AtLEC2   <---------ARR14(2)        <---------------AGL15 <---------YAB1<---------ATHB51      <--   tgttatcattctggacgatatgtcacgagacgagaggttctaacaaataaagcaatagatgattttgataagagtccaataatactagcatattacaagt  16429300                 <---------ICU4                                            --------->AHL20(1)                 --------->ATHB12                                          <---------AHL20(1)                --------->ICU4                                           <---------AHL20(1)  <---------At4g35610                                                    <---------AHL20(2)  --------->At4g35610                                                   --------->YAB1 -GT1        <-------TEIL         <------ZmHOX2a(1)                  --------->YAB1 --------->ARR14(2) -----------RAV1(2)      --------->ICU4                           ----------->GT1   <---------ARR14(2) ---------HVH21 <---------YAB1    <----------ID1        ---------->DOF2<---------YAB1             ---   tgtcagatggagacatccatgattgtaatgaacagaggaacaaaacaattttgtttcacaaagaaattttgttataatatttttcatatactgtttacat  16429400  Previous    Next  AGI:  At2g39330.1    Description:  jacalin lectin family protein. Identical to Myrosinase-binding protein-like At2g39330 [Arabidopsis Thaliana] (GB:O80948); similar to jacalin lectin family protein [Arabidopsis thaliana] (TAIR:AT2G39310.2); similar to jacalin lectin family protein [Arabidopsis thaliana] (TAIR:AT2G39310.1); similar to myrosinase binding protein [Brassica napus] (GB:CAA70587.1); contains InterPro domain Mannose-binding lectin (InterPro:IPR001229) Range:  from: 16426674    to: 16428930    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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