Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             --------->ALFIN1      <------ZmHOX2a(2)      --------->CCA1(2)      --------->ARR14(1)     --------->ARR14(2)     <---------ARR14(2)     <---------ARR11(3)     <---------ARR14(3)     --------->ARR11(1)     --------->ARR14(3)     --------->ARR11(3)                              --------->ANAC55(2)    <---------GLK1(1)                                --------->ANAC58                         <------    <---------HSFB2a(1)                              <---------ANAC55(2)                     --------   ----------->ARR10 --------->ANAC58                --------->ANAC46                    --------->ZAT14 --->At4g35610       --------->ANAC58                --------->ANAC58             ----------->GT1 <-- >ZAT18  --------->LBD16                   <---------ICU4        ----------->GT1 --------->DAG2 <---- -ZAT14<---------LBD16------------>CBF    <---------YAB1    <---------ZAT14     ---------->DOF2 ----- -ZAT18------>ZmHOX2a(2)          <------------CBF <---------ALFIN1     ---------->DOF2  <---------ZAT14   agaagaagatccggtggagcaagaagcaatactactaattgaacatcattacaacacgcgactgaagttgaaaaaaaagatgaaaagttactacagtgtc  16413900                                                             --------->AHL20(2)                                                             <---------AHL20(2)                                                            <---------AHL20(2)                                                         <---------AHL20(2)                                                        --------->AHL20(2)                                                        <---------AHL20(2)      --------->CCA1(2)                                 <---------AHL20(1)     <----------ID1                                 --------->AHL20(2) -----HVH21               <------------CBF        ------>ZmHOX2a(1)           <---------ARR14(2) ->ALFIN1             <---------TOE2(1)           <----------DOF2<-----------GT1   --------->ANAC46 < ----NtERF2           <---------TOE1(1)          --------->TOE2(3)      --------->YAB1        ------- -----ANAC46    --------->DAG2           <------------CBF--------->AHL20(2)   --------->ARR14(2) ---- ---->ETT(1)   ---------->DOF2     <------ZmHOX2a(1)<---------AHL20(2) <---------YAB1    --------->TOE2(3)   ggagagagagacgaagaaaaaggtccgagattgtagaggacgttattgcatcctttaattaatttatatacttatcatcaaatactcgaaacctttgtcc  16414000                              <--------ATHB1                              --------->AHL20(2)                              <---------AHL20(1)                              <---------AHL20(2)                              <---------ICU4                              --------->YAB1                             --------->ICU4                                                  --------                           --------->YAB1                                                  <---------                          <---------AHL20(2)                                            -------------                          --------->AHL20(2)                                           --------->AHL20(2) ----------DOF2          --------->AHL20(2)                                   ======================= --->ID1     <---------------AGL15                                            ---------->DOF2-------- -->ZmHOX2a(1)     <---------HSFB2a(2)  <---------MYB59             <---------YAB1     <---------AHL20(2)   ttcttttgaaataaacttatactggaaattaataattttgggcctaaatcaactagagcccatttgtttcatgtttgattaaaagggatttatataccct  16414100                  <---------DEAR3(1)        <-----------HVH21        <-----------TGA1       --------->bZIP60(2)       --------->TGA1a       --------->ANAC58       <---------O2       --------->O2       <---------TGA1a       --------->ANAC58       --------->ANAC55(1)                                                                       <---    <---------WRKY38(1)                                                                          <---    --------->ZAT18                                                                       --------->DAG2    <---------ZAT18 <------NtERF2                                                        ---------->DOF2 --------->AGL1--------->DEAR3(1)                    >>>>>>>>>MYB2                     --------->At5g28300 --GT1 --------->ANAC46<---------MYB52(1)           --------->MYB52(1)               <---------TOE2(3) -->AtSPL8  <---------ALFIN1                      <---------MYB59                   <---------At5g28300 ================bZIP_DOF           <---------AHL20(2)  --------->ZAT14             <---------LBD16 ->ANAC46----------->HVH21         --------->AHL20(2)>>>>>>>>>MYB1                 <-----------GT1   attgagtccacgtcacaccgtcgtcgttaatcgtggattaatttgttttgggcctaactgaactataaatccacttgtttagtttttacggtaaagtcac  16414200                          <---------ALFIN1                         <------NtERF2                  ---------->DOF2                               --------->TOE2(3)                 --------->AtMYB61                        <---------At4g35610           --------->ARR14(2)                            <---------------AtSPL8                     -     <----------DOF2   --------->RAP2.6(2)<---------ARR11(3)    --------->TOE1(3)                  <- -------DOF2    --------->ANAC46     ------------>CBF    --------------->AtSPL8                 <---- ------DAG2<---------ARR14(2)    <----------DOF2    <----------DOF2                      <-----------GT1   ttttgccctttagaatccaccaaagtcgccactgtctttcccaatttctttgaacttttcaggtacccttaaacttcatcttcttcgatttttaccattt  16414300                                                                                                    -                                                                                                    =                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                    =                                                                                                    =                                                                                                   <-                                                                                                  <--                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                          ------>ZmHOX2a(2)                     -----                                                         --------->ARR14(1)                    ------                                                         --------->CCA1(2)                     ------                                                         <------ZmHOX2a(2)                     <-----                                                        <---------ARR14(2)                     ------                                                        --------->ARR11(3)                    -------                                                        <---------GLK1(2)                     <------                                                        --------->AGP1                        <------                                                        --------->ARR14(2)                    <------            --------->YAB1                 --------->ANAC58             <---------MYB52(1)   <-------           <---------ATHB12                --------->ANAC58           ----------->GT1        <-------         --------->WOX13(1)             --------->At4g35610        <---------ANAC58          <-------       ------------>CBF                 --------->ZAT2 --------->At4g35610                   <------- ----------->CBF                        <---------ZAT2 <---------At4g35610                   <------- ----------GT1   *TSS      <------ZmHOX2a(2)          ----------->ARR10--------->TOE2(3)     <------- -----AHL20(2)  --------->GLK1(1)       <---------At4g35610        <---------ANAC58         <--------   ttttcaatttgcaatcagaaatcgaagcgatccaaattagtaagctcgcccatgctcagatccggtctggcttcgttaatcgtcgatgtcaatttgcggc  16414400     <---------ANAC58     <---------ANAC46     <---------ANAC55(2)     <---------ANAC58  <---------MYB52(1) <-----------HVH21 -------->ANAC58 =========================MYC_MYB -------->ANAC46 -------->TGA1a ---------TGA1a -------->ANAC58 ==============================bZIP_DOF ==============================bZIP_DOF --------TOE1(2) -------ALFIN1 ------ZAT18 ------SPL7 -->NtERF2 ---->DEAR3(1) --->ATERF1(1) >NtERF2 -NtERF2 --->RAP2.3(1) -->LBD16                           <-----------ARR10 ---RAP2.3(1)                  ------>NtERF2 ---RRTF1(1)             <----------DOF2                                              <---------TOE1(3) ---ORA47(2)       <---------DAG2 ------>NtERF2                              <-------TEIL --RRTF1(2)      -------->P   --------->ANAC46                               --------->SPL7 --RAP2.3(2)     ------>MYB83 <---------RAP2.3(2)              <-----------HVH21      <---------TOE1(2) --RAP2.3(3)     ------>MYB46(1)  --------->ABI4(2)    <-----------GT1     --------->LBD16 --RAP2.6(2)    <---------ALFIN1--------->RAP2.3(1)    --------->ZAT6    --------------->AtSPL3 --RRTF1(3)    <---------ALFIN1--------->LBD16<---------MYB52(1)<---------MYB52(1)    <---------TOE2(3) --DEAR3(1)  --------->ANAC46<---------LBD16<---------MYB46(3)--------->ANAC46--------->REM1(1) -LBD16 <-------TEIL<----------DOF2 ------->TEIL    <---------ICU4     ------>ZmHOX2a(1) <---------GLK1(1)   gcacgttacgtccatccccaaccttttcttttccggcgcatcttagccgttgcattatcacttcccgttactcctcccgtacatctctaaggtttccgat  16414500                <---------ALFIN1               -------->P               ------>MYB46(1)               ------>MYB83              ----------->RAV1(1)             --------->AtMYB61             --------->MYB46(3)            <---------MYB52(2)            --------->MYB46(3)           ------>NtERF2          --------->DEAR3(1)       --------->ANAC46                                                         --------->LBD16       --------->ANAC58                                                        --------->ANAC46       --------->ANAC58                                                       --------->HSFB2a(2)   <---------ARR11(3)                                   ---------->DOF2       <---------HSFB2a(2)   <-----------ARR10           <----------DOF2      <------NtERF2           XXXXXXXXXXXXXXXXXXXXX>MIR830*   --------->ARR11(3)          <---------DAG2     <---------DEAR3(1)     ------>ZmHOX2a(1)  --------->RVE1(1)         ------>ZmHOX2a(1)   <-----------HVH21  ------>MYB83--------->LBD16 <-----  --------->CCA1(1)--------->DEAR3(1)      ------>ZmHOX2a(1)       ------>MYB46(1)            <------   tcaaatatctcgccaccaacaccgtctatcctacttttcttcatcctcttcgtcggagcaaagcagaccaacttcctcttcccgaaacagtttcagtggt  16414600                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                 ----                                                                                                 ----                                                                                                 ----                                              --------->YAB1                                     ----                                      <-----------HVH21                                          <---                                     --------->ANAC46                                            ----                                   <---------ATERF1(1)                                           ----                                   ------>NtERF2                        ------>MYB83             ----                 <---------YAB1 ------>NtERF2<---------ATHB12           --------->MYB52(1)      <----     <---------ZAT2             --------->ABI4(1)                       -------->P              -----     <---------At4g35610       --------->DEAR3(1)                       ------>MYB46(1)         <----     --------->ZAT2            --------->ANAC46                        --------->MYB55(1)    <-------     --------->At4g35610    <-----------GT1--------->WOX13(1)         <---------MYB46(2)    <--------   <---------WRKY12 <---------YAB1--------->DEAR3(1)      <---------ARR11(3)      --------->ZAT6<---- <-----------HVH21--------->YAB1<---------ATERF1(1)       --------->ARR11(3)    <-----------GT1<----- ------HVH21     --------->ICU4<---------ALFIN1       ---------->DOF2<---------ANAC58     <---------ANAC58 ---MYB46(3)   --------->YAB1<---------At5g28300--------->At4g35610  <---------ANAC58     <---------ANAC58   cacggtcagcttgatagtgatgataattcttcaccgcctccgtcgcaatcatcttccaaagttcttacattgcctaccgtattaacacttggtcgtgtcg  16414700        <---------GLK1(2)    --------->SPL7  ------>NtERF2  <-----------HVH21  <---------RAP2.6(3)  --------->ABI4(1)  <---------SPL7 --------->DEAR3(1) --------->RAP2.6(2) --------->RAP2.3(2) -------->RAP2.3(1) -------->ATERF1(1) -------->ORA47(2) ------NtERF2 -------->DEAR4(2) ---->NtERF2 ------->ABI4(1) --------ATERF1(1) -------DEAR3(1) ------>RRTF1(3) ------>DEAR3(1) ------>RAP2.3(2) ------>RAP2.3(3) ------>ANAC46 ----->RAP2.6(1) ----->RAP2.3(1) ----->ERF1 ----->ORA47(2) ---NtERF2                    <----------DOF2 ----->RRTF1(1)           <---------MYB52(1) ----->DEAR4(2)         --------->ANAC58 ----->ATERF1(1)        --------->ANAC58                                                        ===== -----ATERF1(1)         <---------ANAC55(2)                                                     ----- ->NtERF2<----------DOF2--------->ANAC55(2)                                                   <------ -----RAP2.3(1)        <-------TEIL<-----------GT1                                          <-------- ----HVH21          --------->ANAC58                                                      <---------ICU4 ---RAV1(1)----------------------->TaNAC69(2)                  <-----------HVH21          --------->YAB1 -----RRTF1(1)      --------->ANAC58                 <---------ARR14(2)                  <---------YAB1 ----DEAR3(1)      <---------TOE1(2)                 --------->ARR14(2)                  --------->ICU4   ccgccgtcccgcttctcgtcgcaagtacgttactttgttacctccaattgttttggattcgaatgtgtcacagtatttgaactaataagttatcatgatc  16414800  Previous    Next  AGI:  At2g39290.1    Description:  PGP1/PGPS1/PGS1 (PHOSPHATIDYLGLYCEROLPHOSPHATE SYNTHASE 1); CDP-alcohol phosphatidyltransferase/ CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase. similar to PGPS2 (phosphatidylglycerolphosphate synthase 2), CDP-alcohol phosphatidyltransferase/ CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase [Arabidopsis thaliana] (TAIR:AT3G55030.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41546.1); contains InterPro domain CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; (InterPro:IPR004570); contains InterPro domain CDP-alcohol phosphatidyltransferase; (InterPro:IPR000462) Range:  from: 16414317    to: 16416201    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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