Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        ----------->GT1                                    <---------At4g35610                                    --------->ZAT2                                    <---------ZAT2                                    --------->At4g35610                        --------->ARR11(3)                                                    ------>ZmHOX2a(1)                       --------->GLK1(1)                                              <----------DOF2                    --------->HSFB2a(2)--------->At5g28300         ------>MYB46(1) ------>MYB46(1)             <---------ZAT18    --------->ANAC46    <----------DOF2------>MYB83    ------>MYB83             --------->ZAT18<-----------HVH21       --------->TOE2(3)           --------->HSFB2a(1)         --------->MYB59<---------ARR11(3)  ---------->DOF2  <------ZmHOX2a(2)  <---------HSFB2a(1)   aacttctaagttaagtccacttctgaaatctttcacacagctgtaacaaagctactttaatggatcaccaaattttagacaaaccttccttttttcctaa  16413300                    <---------ANAC55(2)                  --------->YAB1                 <---------ATHB12               --------->WOX13(1)             <---------ATHB12            --------->ANAC58            --------->ANAC58                                                            <---------GLK1(2)            --------->ANAC46          --------->REM1(2)                                 <---------ARR14(2)         <---------ZAT18            --------->LBD16                                     --------->ARR14(2)         --------->ZAT18      --------->HSFC1(2)                              <---------ARR11(3)         --------->ZAT14      --------->HSFB2a(1)                             --------->ARR11(3) <---         <---------ZAT14      <---------HSFB2a(1)                         --------->REM1(2)     <----       <---------ZAT18        <---------HSFC1(2)---------->DOF2      ------->TEIL   <---------TOE2(3)       --------->ZAT14  ---------->DOF2 ----------->GT1         ---------->DOF2    <-----------GT1   gaatgccagtgtgcactcaatcatgtaaaagaattttccgagtagaaaataaaagttatggagatagaaagaaccttgtagatattaacatattctcggt  16413400                  <------NtERF2          <----------CDC5       ------->MYC3       <-------MYC4       ------->MYC2       ------->PIF5       <-------PIF5       <-------PIF4                                       --------->TOE2(3)       <-------MYC3                                     ------>MYB46(1)       ------->PIF4              <-------MYC3           ------>MYB83  <---------HSFB2a(2)       <-------MYC2        --------->GLK1(2)            -------->P    --------->HSFB2a(2) ------ARR11(3)   ----------->HVH21  ------->TEIL     --------->AtMYB61                         <---- -----CCA1(2)  ------>NtERF2     ------->MYC3        --------->MYB46(3)          <---------TOE2(3)   atctttgcacatgctgaggcctcacagaaaatccatatgcatccctgttcataaaaccaacctcattaacttccctaagtactaagaatatagatgaaat  16413500                <---------ARR14(2)                <---------GLK1(2)                --------->ARR14(2)          --------->ZAT6       <---------ICU4                                                                    --------->LBD16       --------->YAB1                                                                   --------->ANAC58      <---------ATHB12                                                                  --------->ANAC58      --------->ICU4                                                                    --------->ANAC46  <------ZmHOX2a(2)                                               --------->At4g35610   --------->RAP2.6(2) --------->ARR11(3)                 ---------->DOF2               <---------ZAT14    <---------ARR14(2) <---------ARR11(3)           <---------ARR11(3)                  <---------At4g35610--------->ARR14(2) -----ATHB12  ----------->ARR10 ------>ZmHOX2a(2)      <---------At4g35610   --------->MYB52(1)    XX   caagatcaatgatcactagattctcaactagtgatctaaaaagacaacattttgctcagcaaatcgagagcagagagattaactgagaaaccgcaatttc  16413600                                                                                        <----------DOF2                                                                                       --------------                                                                                       <---------DAG2                                                   --------->ANAC58                   <--------------                                                   --------->ANAC58                   ---------------                       <---------AHL20(2)        --------->CCA1(2)            --------->DAG2                    ----------->GT1       --------->MYB52(1)                ---------->DOF2 XXXXXXXXXXXXXXXXXX>MIR866-5P          --------->ANAC46               --------->GLK1(2)<-------------   aaaaaacaaattccatcaaatgtagtaaattagaaacaaaaacacaacgagataagcaatgtagcaatggagaagctcgaaaggcgataccttttgtggt  16413700                        --------->ICU4                        <---------YAB1                      --------->YAB1                     <------ZmHOX2a(2)                     =================HOX2a_HOX2a                 <------NtERF2                <---------RAP2.3(1)                ------>NtERF2               <---------At1g77200                              <---------ANAC46               <---------DEAR3(1)                               --------->ALFIN1               --------->DEAR3(1)                               <---------DEAR3(1)              <------NtERF2                     --------->GLK1(1)              --------->ATERF1(1)               <---------GLK1(1)             <---------SPL7                    --------->ARR11(3)             ------>NtERF2     =========================HOX2a_HOX2a             <-----------HVH21 <---------MYB52(1)------>ZmHOX2a(2)       --------->MYB52(1)<---------ICU4        <---------ARR11(3)           ---------->DOF2    ------ ->AGL15     <---------ATERF1(1) --------->MYB52(2)            <---------ABI4(1)            <-------- ---AGL1    --------->DEAR3(1) ========================HOX2a_HOX2a ----------->HVH21        <-------- -->AGL1    <---------DEAR3(1) ------>ZmHOX2a(1)<------ZmHOX2a(2) <------NtERF2  --------->CCA1(2) >> --AGL15    <---------ANAC46  --------->TOE2(3)<---------ARR14(3) --------->At5g28300       ---------   cagacttagaaacggcgtcggcgatcataattccttagttggagaacgagatctctccgaatagaggcggtgatagttgaaagagatggctgagcgcaga  16413800           --------->ALFIN1      --------->ARR14(1)      --------->CCA1(2)      <------ZmHOX2a(2)     <---------ARR11(3)     --------->ARR14(3)     <---------ARR14(3)     <---------ARR14(2)     --------->ARR11(3)     --------->ARR14(2)     --------->ARR11(1)    <---------HSFB2a(1)                              --------->ANAC55(2)    <---------GLK1(1)                                --------->ANAC58                         <------   ----------->ARR10                                 --------->ANAC46                        -------- --->At4g35610       --------->ANAC58                --------->ANAC58                    --------->ZAT14 -ZAT14  --------->LBD16                             <---------ANAC55(2)          ----------->GT1 <-- -ZAT18<---------LBD16------------>CBF     <---------ICU4        ----------->GT1 --------->DAG2 <---- >>>>>>>TBF1         --------->ANAC58     <---------YAB1    <---------ZAT14     ---------->DOF2 ----- >ZAT18------>ZmHOX2a(2)          <------------CBF <---------ALFIN1     ---------->DOF2  <---------ZAT14   agaagaagatccggtggagcaagaagcaatactactaattgaacatcattacaacacgcgactgaagttgaaaaaaaagatgaaaagttactacagtgtc  16413900                                                             --------->AHL20(2)                                                             <---------AHL20(2)                                                            <---------AHL20(2)                                                         --------->AHL20(2)                                                        --------->AHL20(2)                                                        <---------AHL20(1)      --------->CCA1(2)                                 <---------AHL20(2)     <----------ID1                                 --------->AHL20(2) -----HVH21               <------------CBF        ------>ZmHOX2a(1)           --------->ARR14(2) ->ALFIN1             <---------TOE2(1)           <----------DOF2<-----------GT1   --------->ANAC46 < ----NtERF2           <---------TOE1(1)          --------->TOE2(3)      --------->YAB1        ------- -----ANAC46    --------->DAG2           <------------CBF<---------AHL20(2)   <---------ARR14(2) ---- ---->ETT(1)   ---------->DOF2     <------ZmHOX2a(1)<---------AHL20(2) <---------YAB1    --------->TOE2(3)   ggagagagagacgaagaaaaaggtccgagattgtagaggacgttattgcatcctttaattaatttatatacttatcatcaaatactcgaaacctttgtcc  16414000                              <---------ICU4                              <--------ATHB1                              <---------AHL20(2)                              --------->AHL20(2)                              <---------AHL20(1)                              --------->YAB1                             --------->ICU4                                                  --------                           --------->YAB1                                                  <---------                          <---------AHL20(2)                                            -------------                          --------->AHL20(2)                                           --------->AHL20(2) ----------DOF2          --------->AHL20(2)                                   ---------->DOF2-------- --->ID1     <---------------AGL15                                            ======================= -->ZmHOX2a(1)     <---------HSFB2a(2)  <---------MYB59             <---------YAB1     <---------AHL20(2)   ttcttttgaaataaacttatactggaaattaataattttgggcctaaatcaactagagcccatttgtttcatgtttgattaaaagggatttatataccct  16414100                  <---------DEAR3(1)        <-----------HVH21        <-----------TGA1       --------->TGA1a       <---------O2       --------->O2       --------->ANAC58       --------->ANAC46       --------->ANAC58       <---------TGA1a       --------->bZIP60(2)                                                                       <---    --------->ZAT18                                                                              <---    <---------ZAT18 <------NtERF2                                                         --------->DAG2    <---------WRKY38(1)<---------MYB52(1)                                                ---------->DOF2 --------->AGL1--------->DEAR3(1)                    >>>>>>>>>MYB2                     --------->At5g28300 --GT1 --------->ANAC55(1)                          --------->MYB52(1)               <---------TOE2(3) -->AtSPL8  <---------ALFIN1                      <---------MYB59                   <---------LBD16 ->ANAC46----------->HVH21          <---------AHL20(2)  --------->ZAT14             <---------At5g28300 ================bZIP_DOF          --------->AHL20(2)>>>>>>>>>MYB1                 <-----------GT1   attgagtccacgtcacaccgtcgtcgttaatcgtggattaatttgttttgggcctaactgaactataaatccacttgtttagtttttacggtaaagtcac  16414200  Previous    Next  AGI:  At2g39280.1    Description:  RAB GTPase activator. similar to RabGAP/TBC domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G55020.1); similar to RabGAP/TBC domain-containing protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD73388.1); similar to hypothetical protein OsI_004251 [Oryza sativa (indica cultivar-group)] (GB:EAY76404.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41545.1); contains InterPro domain RabGAP/TBC; (InterPro:IPR000195) Range:  from: 16408665    to: 16413728    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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