Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 --------->ETT(1)               <-------TEIL                                               <---------GLK1(2)        --         <---------ANAC58                                                 >>>>>>>>>ARR1        ------         <---------ANAC55(2)                                    <---------AHL20(2)         <---------ARR14(2)         <---------ANAC58                                      <---------AHL20(2)    --------->WOX13(1)         --------->ANAC55(2)                                   --------->AHL20(2)   --------->MYB46(3)        <-------TEIL              <---------GLK1(1)        --------->AHL20(2) <---------------------WRI1        --------->SPL7     <---------DAG2              ---------->DOF2    >>>>>>>>>ARR2 --------->YAB1      <---------SPL7  <-----------GT1            <---------ANAC58       ----------->ARR10  --------->ARR14(2)     <---------DEAR3(2) <-----------GT1          <---------ANAC58       <---------YAB1 <<<<<<<<<ARR2 ----DOF2<---------ANAC46  <----------DOF2       <---------ANAC46   ----------->GT1<---------KAN4(2)   gatcagacggtacgtgattcattttttcactttatgaaatctgatttgaattcgtgtaaaagaaaataaatggtaagattgtcggaacaatcaaatccga  16333900                    ------>ZmHOX2a(2)                   --------->CCA1(2)                   <------ZmHOX2a(2)                  <---------ARR11(3)                  <-----------ARR10                  --------->ARR11(3)              --------->bZIP60(1)             ----------->STF1           ----------->TGA1     --------->MYB52(1)      --------->ZAT14  --------->YAB1  --------->AGP1                                                    --------->AHL20(2) -------->DOF2<---------bZIP60(1)                                             ----------->GT1     --- --->LBD16 ----------->HVH21 ---------->DOF2                     <------ZmHOX2a(1)  <---------AHL20(2)   ataaagataactggtgacgagatctaacctgtaaagtcaaacagtctcttgttctgtctcaagaacaggattatggagaaatgtaaaaaaattctaagct  16334000          --------->ZAT18    <---------WOX13(1)  -------->ATHB1  <---------ICU4  --------->ATHB12  <------------ATHB5                                     >>>>>>>>>ARR2  <--------ATHB1             ------------------------>ANAC81  --------->ETT(1) <---------ATHB12        --------->ANAC58                >>>>>>>>>ARR1 <---------ATHB51        --------->ANAC58              <---------YAB1 --------->ICU4  <------ZmHOX2a(2)                     ----------->ARR10                            < <---------YAB1 <-----------HVH21            <<<<<<<<<<<<<<<<<LFY<---------GLK1(2)                  < --------->ATHB5<---------ARR11(3)       ---------->DOF2 <---------GLK1(2)          <---------GLK1(2)   tcaatgattgagtccccagatcacatcaagaaaacagacaaacaaaagaacattggtaagattgtcggaatttcgaaacagaaacagaattttgagagaa  16334100                                              <---------WOX13(1)                                            --------->ATHB12                                        --------->ATHB12                                        -------->ATHB1              <---------ANAC58          <---------ICU4              <---------ANAC58         <---------ATHB12                           ---------->DOF2             ------>NtERF2       --------->TOE1(3)                        <------ZmHOX2a(1)         - ---------TOE2(3)                --------->YAB1         ------------------------>ANAC81           --- ---------YAB1<---------ANAC46   --------->TOE2(3)  ---------->DOF2   ---------->DOF2    ---------->DOF2   ataagattgcatcgctgcgtgagaatttcattcaatcttaaatcattgattggcaaaagagaaaacaaatgaaaaaggattgaagaaagaagaaagtgag  16334200                                              --------->YAB1                                            <---------ARR14(2)                                    --------->ARR11(3)                                    <---------ARR14(3)                                    --------->ARR14(2)                                    --------->GLK1(2)                                    --------->ARR14(3)                                    <---------ARR11(3)            --------->ETT(2)        <-----------ARR10     --------->LBD16         <---------REM1(1)    --------->TOE1(3)          <---------ANAC46                   ---------         <---------ANAC46     --------->TOE2(3)   --------->GLK1(2)                         <--------    <------MYB46(1)          <---------ANAC46<------ZmHOX2a(2)                          <------ZmHOX2a(1)    <------MYB83             --------->At4g35610  --------->ARR14(2)                 <------ZmHOX2a(1)   <---------AtMYB61         <---------ANAC55(2) <---------GLK1(2)             <---------YAB1--------  <---------MYB52(1)       <-----------GT1  --------->ARR14(2)               <---------At4g35610 -------->ATHB12    --------->ARR11(3)  <---------LBD16 <---------LBD16  --------->ARR11(3) --------- ------>GLK1(2)    --------->YAB1   <---------ARR14(2) --------->ALFIN1  <---------ARR11(3)<------ZmHOX2a(1)   aatcgttggtgttgtagacattgatattgttacctgaaaatcttcggatcagaatcggtgcggagagaagagagagctcttctgataggaggaggatata  16334300                                                                                                    -                                                                                                    <                                                                                                    <                                                      --------->HSFB2a(2)                           <       <---------At4g35610                    <-----------GT1          <----------DOF2             <-       --------->At4g35610                  *TSS      <---------HSFB2a(2)                          <- >ARR11(3)                               <---------DAG2         --------->AHL20(2)                 == -ARR14(2)                               <----------DOF2        <---------AHL20(2)           -------- ->CCA1(2)                           <---------RAP2.6(2)     --------->YAB1  ---------->DOF2 <------- >ARR14(2)        ---------->DOF2   <---------At4g35610     --------->AHL20(2)        <-----------GT1   gagagagggagatgagagtggaaaggagagggagagagagcggctttttctctgttctacaaataataaaactctttacaaaagtttttttcaaattaaa  16334400                                                               -------->ATHB1                                                               --------->YAB1                                                               --------->ATHB12                                                               <---------ICU4                                                              <---------ATHB12                                                              --------->ICU4                                                              <---------YAB1                                                            --------->WOX13(1)                                                           --------->AHL20(2)                                <---------ICU4          -------->HAHB4                                --------->YAB1          --------->YAB1                                <--------HAHB4          <--------ATHB1                               <---------ATHB12         <---------ICU4       ----------->GT1       --------->WOX13(1)         <--------HAHB4                          -----      <---------TOE1(3)      <-----------GT1            --------->ATHB51                       <-----      <---------TOE2(3)      --------->YAB1            --------->AHL20(2)                      ====== -------------->AGL15      <---------AHL20(2)          <---------YAB1                          ------ ---------------AGL15     --------->YAB1               --------->ICU4               <-------GAMYB ---------DAG2         <---------AHL20(2)              <---------ATHB51            <---------MYB46(3) ----------DOF2   --------->AHL20(2)                 --------->YAB1               <---------TOE2(3) ----------------AGL2  --------->AHL20(2)           <---------AHL20(2)   <---------AHL20(2)    <----- ----------------AGL3<-----------TBP                --------->AHL20(2)   --------->ICU4        ------ ==================================================================================================== ->AHL20(2)       <---------AHL20(1)               --------->AHL20(2)    --------->AHL20(2)<---------GLK1(2) --AHL20(2)       <---------AHL20(2)    ------>ZmHOX2a(1)  <---------AHL20(2)<-----------RAV1(1)<----   tactttttagggtaacttattttatttatattaatcattttcctctaaacttatttaataattaatcattgagtattaattgttgtggttatagattccc  16334500               ----------->HVH21             --------->ANAC55(2)             <---------ANAC55(2) ---------->AGL15         --------------->AGL15         <------MYB46(1) ------------AGL3         <---------------AGL15         <------MYB83 ==========================================MADS_MADS   <---------------AtSPL8 ----------->AGL3        ----------------->AGL2        <---------------AtSPL3 ------------AGL2        <-----------------AGL2       <---------WOX13(1)   ------>MYB83 ----------->AGL2   <------MYB46(1)                <---------YAB1          --------->MYB52(1) ============MADS_MADS   ----------------->AGL3<---------TOE2(3)           ------>MYB46(1) -----------AGL15   <------MYB83   <---------GLK1(2)--------->ATHB12    --------->ANAC46   atttttagtttgaatatgtgataggtttccagttatagattcccagtttaagtttgattggtactgttttctaaacccaacgcttatacatgtaatagtt  16334600                                                                               --------->ANAC58                                                                    --------------->AGL15                                                                 <-----------GT1 --------->ARR11(3)                                                        <---------AHL20(1)     --------->ANAC58                                                        --------->AHL20(2) <------MYB83                                                       --------->AHL20(2)  <------MYB46(1)                                                       <---------AHL20(2)  ----------->GT1         --         <-----------------AGL2                    --------->AHL20(2)  --------->ATHB12          ----         ----------------->AGL1                    <---------AHL20(2) <---------YAB1            -----    --------------->AtSPL8            <---------ARR11(3)<---------AHL20(2)--------->MYB59      <-----    <---------------AtSPL8            --------->ARR11(3)--------->AHL20(1)--------->MYB46(2)  ------- ---------->DOF2<---------LBD16   ---------->DOF2 --------->AHL20(2)<---------------AGL15     <------   tggaaaagagtaccaatttgggggttttttttttaacaaagatgttttgatatttaattaaatttttaaaccatgtttggtaagaaattggaatgagatc  16334700                                            ----------->GT1                                           --------->ANAC58                                  <------MYB83       ----------->GT1            ----------->GT1      --------->DAG2              <------MYB46(1)     ---------->DOF2           --------->CCA1(2) ------->SPL7                  --------->ARR14(1) ----->TOE1(2)                --------->ARR11(1) ->ZmHOX2a(2)                 <---------ARR14(2) -ZmHOX2a(2)                  --------->ARR11(3)  ----------->RAV1(1)    <-----------GT1   --------->At4g35610 -->ARR11(3)                ----------->ARR10    <----------ID1 ----------->RAV1(1)  --------->AHL20(2) ---ARR11(3)          ---------->DOF2      --------->ANAC58    --------->MYB46(3)    <---------AHL20(2)   gtaagacaaaagtgaaaacaatgtgaaagtaagatttggtttaaaacggaaacaacaaaatatcaacaacaaaaaaaaccatcttgttttattagcagag  16334800  Previous    Next  AGI:  At2g39130.1    Description:  amino acid transporter family protein. similar to amino acid transporter family protein [Arabidopsis thaliana] (TAIR:AT3G54830.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68912.1); contains InterPro domain Amino acid transporter, transmembrane (InterPro:IPR013057) Range:  from: 16330034    to: 16334344    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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