Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                --------->ANAC58       --------->DAG2      ---------->DOF2                                                                      <------ZmHOX2a(1)   --------->At5g28300 ----------->RAV1(1)   <---------ARR11(3)                       ------>ZmHOX2a(1)  ----------->GT1      ======================RAV             <---------ZAT6  --------->ALFIN1 ----MYB46(3) --------->ANAC58               --------->ARR11(3)    --------->YAB1     <-----------HVH21 --MYB52(1) ---------->DOF2      <-----------RAV1(2)    <------ZmHOX2a(1)<-----------RAV1(2)---------   ttgatggtaaaagcgaaagcaaggccaacaatgagtcaggtttcagagatgttagaaaggatagtggaaacatcatcagatggtgctccttcaggactgc  16328500                                                                                <------------CBF                                                                             <---------MYB52(1)                                                                           <---------ZAT6                                                                <---------ARR14(2)                                                                --------->ARR14(2)                    ---------->DOF2                             --------->ARR11(3)                 --------->ANAC58                               <---------ARR11(3) ----------->GT1      ---------->DOF2     <-------TEIL                        ----------->ARR10--------->ATHB12 --------->YAB1  --------->ANAC58                   <---------ZAT6         ----------->GT1 >RAP2.6(3) ----------->HVH21                       ----------->GT1<---------MYB46(3)              --   cattgatgaaaagcttgacacctaaagatgcattcgaagcctcaagaagggagagagttaagagaagatttgttgaactgttaattggagaaaatggttg  16328600                                                                                                 <---                                                                                                <----          -------->P                                                        <---------ANAC46   ------          ------>MYB46(1)                                                   <---------ANAC58   <-----          ------>MYB83                                                      <---------ANAC58  -------        <---------MYB46(2)                                           --------->YAB1         ---------        <---------MYB59                                           <---------ICU4            ---------        <---------MYB111(1)             <---------AHL20(2)        --------->YAB1          --------->ICU4     <-----------GT1          <-----------GT1              --------->MYB52(1)          ------------>CBF ---------->CBF            ----------->GT1   <---------AHL20(2)--------->YAB1   <---------ZAT6<------   tcccaatttacctacttggtctcataaacttgttacttctatttgatttttttgagagaacaaactgataatcacactgcttgtgttatgccaatattaa  16328700       <---------ICU4       --------->YAB1     --------->AHL20(2)    --------->YAB1       --------->AHL20(2)                                --------------->AGL15   --------->ICU4        ----------->TBP                                   <---------------AGL15   <---------YAB1      --------->HSFB2a(2)          ------------>CBF<---------ANAC58 ------WOX13(1)        <---------HSFB2a(2)  --------->ARR14(2)      <---------ANAC58             ---- --------CBF          <-----------------AGL3<---------ARR14(2)   --------->ALFIN1               <---- --->ATHB12      <---------ANAC58       <------NtERF2          <---------ANAC58                <----- ----ICU4        <---------ANAC58       --------->LBD16        <---------ANAC58          <----------- -->AHL20(2)    ---------->ID1         --------->ANAC58        <---------ANAC46         <---------ICU4 >YAB1<---------YAB1  =====================================================================MADS_MADS >TOE2(3)   <---------ANAC55(2)        --------->ANAC58     --------->ANAC46    ---------->DOF2------ ---AHL20(2)--------->ANAC55(2) --------->MYB52(1) --------->ANAC46 <---------ANAC46   --------->ICU4   ttgccattataatcacttgtcgtttctataaataaaacggcccgcagttttgcccacaataaacgccgtgtcgtttacatcttaaagtaaacattgcaac  16328800                                                                                        --------->ANAC58                                                                                        --------->AtLEC2                                                                                        --------->ANAC58                                                                                     <------NtERF2                                                                                    <---------RAP2.6(3)                                                                                    ------>NtERF2                                                                                   <---------ATERF1(2)                                                                                   --------->RAP2.3(3)                                                                                   --------->RAP2.3(2)                                                                                   --------->RAP2.6(2)                                                                                   --------->ATERF1(2)                                                                                   --------->ANAC46                                                                                   --------->RRTF1(2)                                                                                   --------->RRTF1(3)                                                                                   --------->DEAR3(1)                                              <---------TOE2(3)                    --------->DREB2C(2)                                              <---------TOE1(3)                   --------->RAP2.3(1)                                          <----------DOF2                         --------->ORA47(2) --->GAMYB                               <----------DOF2                          --------->ERF1 --------AtMYB77                 --------->ATHB12                                 --------->ATERF1(1) ----At4g35610                   --------->MYB52(2)                              <---------ATERF1(1) -CBF   <---------MYB52(1)     <---------MYB52(1)                               --------->ANAC46 --->At4g35610   --------->GLK1(1)<------------CBF               ------------>CBF<---------RAP2.3(1)   tgtcttctccgatagtccgatttctatgttcccgttaattggggttttagggttttccgattagttccacaatgctctctattcgccgccatgccaaaac  16328900                 ------>MYB46(1)                 -------->P                 ------>MYB83               --------->AtMYB61               --------->DEAR3(1)                   <---------------AGL15               <---------MYB111(2)        --------->DEAR3(1)               <---------MYB46(2)         --------->ETT(2)               <---------MYB111(1)        <---------DEAR3(1)               <---------ALFIN1           <---------ETT(2)              ------>ZmHOX2a(1)               <---------MYB55(2)     ------>MYB46(1)                  --------->TOE2(3)          ------>ZmHOX2a(1)           ------>MYB83  --------------->AGL15        ----------->RAV1(2)         --------->TOE2(2)                 ===============================       ------>ZmHOX2a(1)           --------->DEAR3(2)                 ------>ZmHOX2a(2)  <---------ANAC58                 <---------HSFB2a(1)               <------ZmHOX2a(2)  <---------ANAC58                 --------->HSFC1(2)                ================================ --------->At4g35610               <---------HSFC1(2)               <---------ARR11(3) --------->ZAT2--------->MYB46(3)  --------->HSFB2a(1)              <---------ARR14(2) --------->HSFB2a(1)           <---------MYB52(2)  <---------AtLEC2 --------->ARR14(2) <---------At4g35610          <-----------------------TaNAC69(2)    --------->ARR11(3) <---------HSFC1(2)<---------MYB59------->TEIL --------->DOF5.7(2) --------->GLK1(1)              --- --------->HSFC1(2)--------->TOE2(3)--------->TOE1(2)              <---------GLK1(1)       <---------ALFIN1   cgtagcttcctcctgcaccaaccttactcagaaacgaacctacgtcgacgtttacatgaaatggaagagagatccttatttcgacaacatcgaacacatc  16329000                                                         ------>MYB46(1)           --------->At4g35610                           ------>MYB83           <---------At4g35610                         <---------MYB59           --------->ZAT2                           --------->ARR14(2)           <---------ZAT2                           <---------ARR14(2)      --------->At4g35610                          <------ZmHOX2a(1)          ------>NtERF2    --------->YAB1                                 ==============================HOX2a_HOX2a   <---------ATHB12      <---------CCA1(2)         =============================HOX2a_HOX2a   <------ZmHOX2a(2)  <---------MYB52(1)         --------->LBD16          ------>ZmHOX2a(2) ====HOX2a_HOX2a     <-----------HVH21          <---------HSFB2a(2)      --------->GLK1(1) ====HOX2a_HOX2a <---------ARR14(2)             --------->HSFB2a(2)      <------ZmHOX2a(2) --->ZmHOX2a(1)  --------->ARR14(2)       --------->ARR14(2)             <---------GLK1(1)       <---   ctccgatcatctcagctcaaatccgtcgtctctcttaagaactgtatcgtccaggaacctaatcgctgcattccgatctctgccatctccaagaagactc  16329100                                        --------->HSFC1(2)          <------MYB83                                        <---------HSFC1(2)          <------MYB46(1)                ------->GAMYB           --------->HSFB2a(1)         <---------DEAR3(2)                --------->TOE2(3)       <---------HSFB2a(1)         <---------MYB46(3)                --------->YAB1       <------ZmHOX2a(1)            <---------MYB52(1)               --------->MYB46(3)  <---------TOE2(3)             <-------GAMYB<---------KAN4(2)             --------->WOX13(1)    <---------TOE1(3)            --------->MYB52(2)                <--          ------->TEIL       --------------->AGL15              <---------MYB46(3)              <<<<< --------HVH21-------->P     <---------------AGL15 <---------ATHB12<---------TOE1(2)           <-----   gtcaattcgatgtatcaaccaaaatcgctcacttcttaaggaagtttccttcaatctttgaagagttcgttggtccagagtataatctcccatggtttag  16329200                                                                          <------MYB83                                                                     ----------->HVH21                        --------->CCA1(2)                          <---------ANAC58                       <---------ARR14(2)                          <---------AtLEC2                       --------->ARR14(2)                          <---------ANAC58                      <---------STY1(2)                   --------->At4g35610               ------->GAMYB                              <---------At4g35610         --------->ANAC58                       ------>MYB46(1)    <---------ANAC55(1)         --------->ANAC46 --------->ANAC58      ------>MYB83       <---------ANAC55(2)         --------->ANAC58 --------->ANAC58    <---------MYB59      <---------ANAC46          <------- -------WOX13(1) --------->AGP1               <---------MYB46(2)   --------->ANAC55(2)  <---------GLK1(2) <<<<RAP2.2 --------->MYB52(1)               --------->ANAC46--------->ATHB12     --------->ARR11(3)- ----TOE2(3)----------->RAV1(1)        <---------ANAC46<---------At4g35610<------MYB46(1)   <--------   attgacaccagaagcaacagaactagataggcaagagagagtcgtataccaaacttctgcagatgatttgcgtgataggttgaagaaattgattctgatg  16329300                                                                                   --------->CCA1(2)                                                               --------->ATHB12   <---------ARR14(2)                                                               <---------ICU4     <---------ARR11(3)                                                              --------->ICU4      --------->ARR14(2)    --------->ARR11(3)                                   --------->ANAC55(2)    --------->LBD16    <---------ARR11(3)                                   ----------->RAV1(2)   --------->HSFB2a(2)   --------->YAB1                          ----------->GT1    <---------YAB1   <---------HSFB2a(2) --At4g35610                    --------->ANAC58  <---------TOE2(3) <---------ANAC58 --------->DOF2                 --------->ANAC46  --------->MYB59   <---------ANAC46          <------ -YAB1 <---------TOE2(3)        --------->ANAC58  <---------TOE1(3) <---------ANAC58    ------->TEIL   agtaaagataatgttttgccactaagtatagttcaaggaatgaaatggtatttaggtttacctgatgattacttgcagtttccagatatgaatttagatt  16329400  Previous    Next  AGI:  At2g39110.1    Description:  protein kinase, putative. similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G09830.1); similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G09830.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO68919.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009) Range:  from: 16326742    to: 16328763    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g39120.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G58520.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68916.1); contains InterPro domain Protein of unknown function DUF860, plant (InterPro:IPR008578) Range:  from: 16328872    to: 16330035    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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