Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            --------->AHL20(2)                                         --------->At4g35610          <---------YAB1              ---                              <---------MYB52(1)                   --------->ARR14(2)      <---------    <----------DOF2          --------->LBD16                       --------->GLK1(2)       --------->GLK1(2) ------->TEIL              <---------LBD16                         <---------ARR14(2)     <---------GLK1(2) ->DOF2          <---------YAB1 --------->ZAT14  ---------->DOF2  <---------GLK1(2)   ---------->DOF2   atgaaacttttgagaacttacaatagctctccggtgttctctctgatgaaataaagcatcacccagtagaatctgattaaaaaacacagaaagaatctaa  16324000                                                                      ------>NtERF2                                                                     --------->ANAC46                   --------->At4g35610                              <---------LBD16                   <---------At4g35610                            <-----------GT1                --------->ZAT2                                 --------->ARR14(2)                <---------ZAT2                                 <---------GLK1(2)                --------->At4g35610                            <---------ARR14(2)  <------ZmHOX2a(1)              <-----------RAV1(2)        <---------LBD16      ------>MYB46(1)<---------ZAT2      --------->MYB52(1)               --------->ETT(2)     <---------MYB59  --------->At4g35610    > ------>TOE2(3) <---------At4g35610 --------->RVE1(1) --------->TOE1(3)      --------->ZAT2        -- --ARR10 ------->GAMYB        ----------->GT1  ---------->DOF2------>MYB83   <---------At4g35610 <---   cttcaatctaacggactcagcagctactaaaatagaaaatatcgacggagaaagaagcttaaccaaattctccgccttgagctgaggactagtttcggca  16324100              --------->CCA1(2)       <------ZmHOX2a(1) --------->ZAT6              <---------LBD16 >>>>>>>>>AtWER        --------->At4g35610             <---------GLK1(2) ------->MYB52(1)      <---------At4g35610   <---------ARR14(2)                                ------ ------MYB52(2)     ---------->DOF2       <---------ANAC46        --------->ARR11(3)     ----------->GT1   ctaacagtaggagaagaaacgagaaagcagccctggatttagttgcatatatagagagaatttcattagctcttgatgaaaactagggatttagaaaaaa  16324200                                                           ---------->DOF2                                                     --------->ARR14(2)                            --                                                     <---------GLK1(2)                   <---------At4g35610                  --------->At4g35610            <---------At4g35610                     --------->At4g35610         <---------ATHB12                        --------->At4g35610                   ------>ZmHOX2a(2)         <<<<<<<<<ARR2                <---------ANAC46  ----------->GT1               <------ZmHOX2a(2)       --------->WOX13(1)             <---------ANAC58  --------->YAB1               --------->ARR14(2)  --------->CCA1(2)   ---------->DOF2 <---------ANAC58--------->GLK1(2)              <---------ARR14(2) ---->DOF2--------->YAB1            --------->CCA1(2)<---------ARR14(2)     ---------->DOF2   <------   agagatagacaatcaaaatgagctaaaagctagagaagttacgagcatttcagcagaatcgtaaagcccatgctctattaaagtcgcgatctgctccttt  16324300                                                                                        --------->ANAC46                                                                                        --------->ANAC58                                                                                <---------GLK1(2)                                                                                <---------ARR14(2)                                                                                --------->ARR11(3)                                                                                <---------ARR11(3)                                                                                --------->ARR14(2)                                                                               --------->RVE1(1)                                          --------->YAB1      --------->At4g35610   ------>ZmHOX2a(1)                                         <---------ATHB12     <---------At4g35610<------ZmHOX2a(2) --------->MYB46(3)                      --------->ICU4       <---------ZAT2  *TSS------>ZmHOX2a(2) ------->ARR14(2)                --------->MYB52(2)           --------->ZAT2---------->DOF2 ----DOF2                      <---------MYB52(1)        <---------LBD16----------->GT1 --------->ANAC58   ggaacctccatttcagagacaagagagttcgtcgttagtggcaatggtgaagttttttcttcggagcagcgatgaagtaaaagatccttcacgctcgctc  16324400                                        ----------->RAV1(1)                                       --------->DREB2C(2)                             <---------WRKY12                  <---------HSFB2a(2) --------->DEAR3(2)               --------->ARR11(3)     --------->MYB46(3)              --------->GLK1(1)     --------->MYB52(1)                                      <--------              <---------GLK1(1)  ------->GAMYB                  <---------GLK1(1)   <-----------GT1           --------->ANAC58  <---------WRKY38(1)    <---------MYB52(1)       <-------TEIL   <--------           --------->ANAC58<-----------HVH21  <-----------GT1   --------->GLK1(1) ---------->DOF2   ttcattttgaaacaagaaatctcgaaccgagtcaacccaaaccgacattaaccggttatctatctgaaatccatctcggttcattaaaacccgacttttc  16324500                                                                --------->DEAR3(1)                                                               --------->ATERF1(1)                                                               <------NtERF2                                                              <---------RAP2.3(1)                                                              ------>NtERF2                                                              <---------ATERF1(1)                                                              --------->ABI4(2)                                                             --------->DEAR3(1)                                                             <---------DEAR3(1)                                                            --------->RAP2.3(1)                                                           <---------ATERF1(1)                                                          <---------DEAR3(1)                ------>MYB46(1)                           --------->O2                      ---------                *TSS                                      --------->ANAC46                 --------->LBD16                ------>MYB83                             <---------LBD16                  <---------LBD16              --------->DEAR3(1)         ------>NtERF2  <---------ALFIN1                ------>ZmHOX2a(2)              --------->MYB46(3)  --------->WRKY18(1)  <---------REM1(2)       <---------ARR11(3)             --------->ANAC46    <-----------HVH21    ------>ZmHOX2a(1)        --------->ARR11(3) --DOF2   <---------ZAT14       --------->LBD16     --------->SPL7        --------->HSFB2a(2) ------- -DAG2<---------ALFIN1        <---------LBD16  <---------At5g28300        <---------HSFB2a(2)<------NtERF2   caagagcccgacttcaccgaacaatctctatctccggtcatgcctccattaccgtcctccacggcgccttcgtcttcgagacatcttcgatcgccggaaa  16324600                                                                                               ------                                                                                              <------                                                                                             <------NtERF2                                                                                            ---------                                                                                            ------>NtERF2                                                                                           --------->RRTF1(2)                                                                                           --------->DREB2C(2)                                                                                           --------->DEAR3(1)                                                                                           --------->RRTF1(3)                                                                                           --------->RAP2.3(3)                                                                                           <---------DEAR3(1)                                                                                           --------->ATERF1(2)                                                                                           --------->RAP2.3(2)                                                                                          --------->ATERF1(1)                                                                                          --------->ORA47(2)                                                                                          --------->RAP2.6(1)                                                                                          --------->RAP2.3(1)                                                                                          --------->RRTF1(1)                                                                                          --------->DEAR4(2)                                                                                          --------->ERF1                                                                                         --------->LBD16                                                                                         <---------ATERF1(1)                                                                                         --------->At4g35610                                                                                        --------->DEAR3(1)                                                                                      <------ZmHOX2a(2)                                                                                     --------->ARR11(1)                                                                                     --------->ARR14(3)                                                                                     <---------ARR11(3)                                                                                     --------->ARR11(3)                                                                                     <---------ARR14(3)                                                                                     <---------ARR14(2)                                                                                     --------->ARR14(2)                                                                                    <---------HSFB2a(1)                                                                                    --------->GLK1(1)                                                                                    --------->HSFB2a(1)                                                                                    <---------GLK1(1)                                                        <---------ARR14(2)         ---------->TaMYB80                                                        <---------MYB52(1)         ----------->ARR10                                  <----------DOF2  <-----------HVH21     --------->MYB52(1)--------->RAP2.6(2)                                  <---------------AGL15 --------->ARR14(2)  ------->GAMYB------>NtERF2                               ------>ZmHOX2a(1)<---------ANAC58     <-----------ARR10--------->CCA1(2)                             <---------ANAC58   <---------ANAC58     --------->GLK1(2)--------->ARR14(1) >LBD16                    <-----------GT1   --------->GLK1(1)       <---------ARR11(3) --------->ANAC46 --->DOF2   <---------AtLEC2 <---------ANAC58<---------GLK1(1)       --------->ARR11(3)------>ZmHOX2a(2)   gtatcgcgaaatttgcagggagagcaatatttcctgctttacaggggaaatcgtgtccgatatgcctcgaaaatctaaccgagcgaagatccgccgccgt  16324700                  --------->ARR14(2)                  <---------GLK1(2)                  <---------ARR14(2)               --------->ANAC58               --------->ANAC58              <---------LBD16       <---------LBD16     --------->ALFIN1    <---------ANAC58         <---------At4g35610       <-----------GT1     <---------ANAC46    <---------ANAC58  --------->ALFIN1 <------ZmHOX2a(1) --------->ZAT6     <--- --->LBD16  <---------ZAT2   <---------ANAC58     --------->At4g35610  <----------DOF2        ------>ZmHOX2a(1) ---ANAC46 --------->ANAC58  <---------ANAC58     --------->ZAT2     ------>ZmHOX2a(1)        ------- >ABI4(1)  --------->ANAC58  <---------ANAC46  <---------At4g35610---------->ID1       <---------YAB1   gatcacggtgtgcaagcacggatactgccttgcttgtattcggaagtggagcagcttcaagaggaattgtcctctttgtaacactcgttttgattcctgg  16324800                                                                                                   --                                                                                                  <--                              --------------->AGL15                                              ----                              <---------------AGL15                                         ------>ZmHOX2a(1)                             ----------------->AGL2                                    --------->KAN4(2)                    --------->HSFC1(1)                                                 --------->YAB1      --------->MYB52(2)     ----------------->AG                                     --------->KAN4(1)    <---------MYB52(1)       ----------------->AGL1                                   <---------KAN4(1)   --------->TOE2(3)<---------HSFB2a(2)                              --------->DOF5.7(2)  <---------ICU4 <---------TOE2(3)  --------->HSFB2a(2)                             <----------DOF2  <---------KAN4(2) <---------TOE1(3)  <---------HSFC1(1)                       --------->TOE1(2)  --------->At4g35610== -------DOF2    <---------ANAC58    ===============================HOX2a_HOX2a--------->YAB1========= -->LBD16       <---------ANAC58    <------ZmHOX2a(1)       ------>ZmHOX2a(2)<---------YAB1 =========   tttatcgttagtgattttgcttctagaaaataccataaggagcaattaccaattcttcgtgatcgtgagactttaacttatcatcggaataatccttccg  16324900  Previous    Next  AGI:  At2g39090.1    Description:  tetratricopeptide repeat (TPR)-containing protein. similar to APC8 (anaphase-promoting complex/cyclosome 8), binding [Arabidopsis thaliana] (TAIR:AT3G48150.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71008.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Tetratricopeptide TPR-1 (InterPro:IPR001440); contains InterPro domain Tetratricopeptide TPR2 (InterPro:IPR013105); contains InterPro domain Tetratricopeptide region (InterPro:IPR013026) Range:  from: 16319769    to: 16324378    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g39100.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to hypothetical protein [Vitis vinifera] (GB:CAN77823.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 16324516    to: 16326465    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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