Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              ----------->RAV1(1)                                                                        --------->ZAT18                                                                 <---------ARR14(2)                                                                 --------->ARR14(2)                                                                 <---------ARR11(3)                                                       --------->LBD16  <---------ZAT18                                                       ------>NtERF2   <---------ANAC58                                                  --------->At4g35610  <---------ANAC46                                           <---------TOE2(3)     --------->ARR11(3)                                           <---------TOE1(3)    <------ZmHOX2a(1)                                    --------------->AGL15     <---------TOE2(3)  ---------->DOF2     --------->AHL20(2)             <---------------AGL15    --------->YAB1--------->ANAC46     <---------AHL20(2)   <---------AHL20(2)      <---------At4g35610  <---------ANAC58 ------->GT1        --------->AHL20(2)   ---------->DOF2  <----------DOF2--------->ANAC46 <---------CCA1(2) ---->DOF2          <---------AHL20(2)<----------DOF2<---------LBD16  <---------ZAT18   --------->TOE2(1)   agaaaaattaaaaacccaaaatttatattttaaaatttctctttaaaggtttagctccggctatgaggatattgcgcacaacacaaagcctcgtatcaag  16298200                                                      ----------->GT1                                                     <---------TOE1(2)                                                  <---------ANAC58                                                  --------->MYB52(2)             --------->ANAC46                                                  <---------ANAC58               --------->ANAC58                                              <---------MYB46(3)              --------->MYB52(1)                                        <---------ANAC46                <------ZmHOX2a(1)                                        <---------ANAC58               ----------->GT1                      --------->YAB1    <---------ANAC58        <---------------AGL15     --------->DAG2                 >>>>>>>>>>>>>>>>>LFY  <---------STY1(2)        --------->TOE2(3)--------->ANAC58  <-           --------->ICU4              --------->STY1(2)       <-----------------AG     ---------->DOF2   tagtctacatgaaatgtttgcccattgtaattttgtaaactagcttgtttgttcgtgggtaaaataacttaataggaaaataccagcaaaaaaaggcgag  16298300                    ----------->RAV1(1)                  --------->LBD16             <---------ATHB12    <---------ARR14(2)                  --------->MYB46(3)        ------>MYB83          --------->ARR14(2)            <-----------GT1 <-----------RAV1(1)--------->YAB1     --------->KAN4(2)  --------->ICU4 --------->ANAC46           ------>MYB46(1)      <----------TaMYB80 -----ZmHOX2a(1)--------->ANAC46       <-----------GT1     ---------->DOF2   aggaattagtgatttttccccccaacaaaattgttgcaaaataaccaaatcaaaatcaattgaaagcatattctttagacatcaatagagtcttcataga  16298400                                                       --------->AHL20(2)                                                   --------->AHL20(2)                <------------CBF                                                  --------->AHL20(2)           <-----------GT1                                               <---------AHL20(2)         --------->AHL20(1)                                              --------->AHL20(2)          <---------AHL20(2)     <---                                           <---------DAG2                 --------->AHL20(2)    -----        --------->YAB1                     <----------DOF2---------->DOF2<---------AHL20(2)     <----       <<<<<<<<<ARR1                     ------->TEIL --------->AHL20(2) --------->AHL20(2)    ------       <<<<<<<<<ARR2          <---------MYB52(1)--------->YAB1     ----------->GT1  --------->ATHB12       <---------ATHB12<---------ZAT6--------------->AtSPL8       ----------->GT1 --------->TOE2(3)  --------->YAB1----------->RAV1(2) <-----------GT1<---------AHL20(2) --------->AHL20(2)   ----------   ctaatcacaatcataaacacctgtagtgttcccttattttacgaactttttaataaataaaaaagaagaagataaattaattaacctcattgcaaaagag  16298500                       ----------->TBP                     --------------->AGL15                    =================================================================================                    <-----------------AGL3                    ----------------->AGL1                    ----------------->AGL3                    ----------------->AGL2                    <-----------------AGL2                  <---------ARR11(3)                 <----------DOF2                           <---------ALFIN1               --------->ZAT2                   <---------ALFIN1        --------->ANAC58            --------->MYB46(3)   <---------ALFIN1        --------->ANAC58           <---------ALFIN1     --------->MYB46(3)    --------->TOE2(3)--------->TOE2(3)         <---------ZAT18 ---ZmHOX2a(1) --------->At4g35610------>MYB83 --------->ZAT14                  <----------DOF2 ------>GT1    <---------At4g35610------>MYB46(1)      *TSS<---------CCA1(2)    <---------DAG2 ------ID1   <---------ALFIN1    <---------ALFIN1 --------->ANAC46        ----------------------->TaNAC69(2) ----->GT1 ----------->RAV1(1)  --------->MYB46(3)--------->bZIP60(2) ------->GAMYB >DOF2---------->DOF2<---------------AGL15     <---------ZAT14       --------->ZAT6   gaaaaacctaaagccacagctttccataaatagacccactcaccatctctgcacatcacccacatcttctaacagtctctcactttctctcttctctctc  16298600                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                   --                   --------->REM1(2)                                                              ---                  ----------->HVH21                                                <------ZmHOX2a(1)-                 --------->LBD16                                 <---------HSFB2a(1)              ---                <---------ANAC58                              <------ZmHOX2a(1)  --------->ANAC58----                <---------ANAC55(2)                     <---------LBD16      --------->LBD16     ----                <---------ANAC58                      --------->WRKY38(1)    ------>NtERF2      -----     <----------DOF2                                  --------->WRKY12      --------->ANAC46    <----     <---------------AGL15                            ----------->HVH21     <---------ETT(1)   <-----     --------------->AGL15                     <------ZmHOX2a(1)----------->ARR10--------->ANAC58<--- <----------DOF2<---------ANAC46       ----------->TGA1--------->MYB52(1)  <---------LBD16     <----- ====================MADS_MADS   ---------->DOF2    --------->At4g35610 <----------DOF2        ------   tctctttcttttttgagtccgtgaaggctaagtctgaaagaatgacgaaggatgagttgacggaggaagagtcgctctccggcaaggactacttagaccc  16298700      --------->REM1(2)      --------->ZAT14 ----------->RAV1(2) --------ALFIN1 ----->GAMYB ------->DEAR3(1) ------->DREB2C(2) ------>DEAR4(2) ----->NtERF2 ------>MYB46(3) -->MYB46(1) -->MYB83                                                  <---------------------WRI1          ------ ---->MYB55(1)                                      <---------ZAT2                           -------- -----ALFIN1               --------->At4g35610      --------->ZAT2                           <------- ----MYB55(2)              <---------At4g35610      --------->At4g35610                      <------- ------ATERF1(1)    --------->ALFIN1                <---------At4g35610                      <------- ----ABI4(2)    <---------HSFB2a(2)        ------>ZmHOX2a(1)        <-------TEIL     <----------DOF2 --->MYB46(3)  <---------TOE1(1)     --------->ALFIN1  <-----------HVH21      <----------DOF2--------   accgcctgtgaagacgttcgaggtgagagagctcaagaagtggtccttctacagagctgtcatcgctgagttcatagctactttgctctttctatacgtg  16298800                                                       <---------ANAC58                                                      <---------ZAT2                                                     <---------ARR14(2)                                                     --------->ARR14(2)                                                   --------->LBD16                                                  <---------ANAC46                                                  <---------DEAR3(1)                                                  --------->ALFIN1                                                 --------->ATERF1(1)                                                 <------NtERF2                                                 <---------LBD16                                                 <---------ABI4(1)                                                 --------->At4g35610                                                 <---------At4g35610                                                <---------RRTF1(1)                                                <---------ATERF1(1)                                                <---------RAP2.6(1)                                                <---------DEAR4(2)                                                <---------ERF1                                                ------>NtERF2                                                <---------ORA47(2)                                                <---------RAP2.3(1)                                               --------->ATERF1(2)                                               <---------RAP2.3(3)                                               <---------ATERF1(2)                                               <---------RRTF1(3)                                               <---------RRTF1(2)                                               <---------RAP2.3(2)                                               <---------DEAR3(1)                                               --------->DEAR3(1)                                              --------->RAP2.3(1)                                              --------->ATERF1(1)                                              <------NtERF2                                              <---------ABI4(1)                                             <---------RAP2.3(1)                                             <---------ORA47(2)                                             <---------ATERF1(1)                                             --------->LBD16                                             <---------DEAR4(2)                                             <---------ERF1                                             ------>NtERF2                                             <---------RAP2.6(1)                                            --------->ATERF1(2)                                            <---------DEAR3(1)                                            <---------RAP2.3(2)       <---------ATERF1(1)     >>>>>>>>>WRKY18                        --------->DEAR3(1)        <------NtERF2    ----------->HVH21                       <---------ATERF1(2)     --------->ETT(1) ----->HVH21                               --------->ATERF1(1)      <---------RAP2.6(2) ->ANAC55(2)                               <---------LBD16         --------->RAP2.6(3) --ANAC55(2)      <----------DOF2         ------->GAMYB<---------ANAC58     ------>ZmHOX2a(1)  <----- --ANAC58    <---------At4g35610         --------->DEAR3(1)       <-----------HVH21          <------- --ANAC58  <---------WRKY12              --------->ANAC46        <-----------RAV1(1)        <-------- ->ANAC46  <---------WRKY38(1)     --------->GLK1(1)<------NtERF2--------->ALFIN1 <---------CCA1(2) <   actgttttgacagtcatcggctttaagagccagactgatatcaacgccggcggcggagcttgtgccagtgtcggcctcctaggcatctcttgggcctttg  16298900                                 <------NtERF2                                ------>NtERF2                                --------->LBD16                               --------->RAP2.6(2)                               <---------ATERF1(2)                               --------->ATERF1(2)                              <---------LBD16     --------->ARR11(3)       --------->RAP2.6(3)     <---------ARR11(3)      --------->MYB52(1) <---------ANAC46       <---------ZAT18 <---------ANAC58       <---------ZAT14 <---------ANAC58       --------->ZAT18                                                      -------- ----AtMYB61            --------->ZAT14                                                 ------>ZmHOX2a(1) ---DOF2              --------->ANAC46                                                 --------->TOE2(3) --DOF2  <-------TEIL--------->At4g35610                                               --------->TOE1(3) ------NtERF2  ------>ZmHOX2a(1)<---------RAP2.6(3)                                <----------DOF2   gtggcatgatattcatcctcgtctactgcactgccggcatctctggtctctctctctctctctctctctctctctctctctctctctttccttaaccatt  16299000                                        <---------ICU4                                        --------->ATHB12                                       <---------YAB1                               ------->PIF4                               <-------PIF4                               <-------MYC4                               ------->PIF5                                  --------->At4g35610                               <-------PIF5                               ---------->DOF2                               <-------MYC2                      --------->TOE2(1)                               ------->MYC2                      --------->TOE1(1)                               <-------MYC3                      --------->ANAC46                ----                               ------->MYC3          ------>ZmHOX2a(1) ---------->DOF2           ----                             ------->TEIL  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)               <----- ------->AGL15  <---------AtLEC2     --------->REM1(1)          ------>ZmHOX2a(1)<---------GLK1(2) <-   ttttgcattatctgatttgcatagcaaaatgcacatgcttcatcattcgaggctcctatacatgtcctcgtaacaaagaagcagaatttcaaaaatacca  16299100  Previous    Next  AGI:  At2g39010.1    Description:  PIP2;6/PIP2E (plasma membrane intrinsic protein 2;6); water channel. Identical to Probable aquaporin PIP2-6 (PIP2-6) [Arabidopsis Thaliana] (GB:Q9ZV07); similar to PIP2,5/PIP2D (plasma membrane intrinsic protein 2,5), water channel [Arabidopsis thaliana] (TAIR:AT3G54820.1); similar to water channel protein [Brassica rapa] (GB:ABL97985.1); contains InterPro domain Aquaporin; (InterPro:IPR012269); contains InterPro domain Major intrinsic protein; (InterPro:IPR000425) Range:  from: 16298555    to: 16301112    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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