Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       <---------AHL20(2)                     <---------AHL20(2)             <---------YAB1                    <---------AHL20(2)            <---------ICU4     <---------ZAT6 --------->AHL20(2)            --------->ATHB51 --------->ZAT14 <--------HAHB4                   <--------HAHB4 --------->ZAT18 <---------ICU4          --------------->AtSPL8 <---------ZAT14--------->ICU4          <---------ANAC58                                   <---------ICU4 --->YAB1    <-------TEIL               <---------ANAC58                                  <---------YAB1 ---YAB1   ------->MYC3                 <---------ANAC46                         <---------MYB52(1) -ICU4     <-------MYC3  --------->AHL20(2)      --------->ICU4              <---------ATHB12 >YAB1<-----------HVH21 --------->AHL20(2)       <---------YAB1        <-----------GT1  --------->YAB1   tagtgtagtgtcatgtgcataattaaataaaaaaactcactggcttgtaccattattaatcgcacaaggagtattacaaatcagttgttttcatcattct  16280600                                 <----------DOF2                        --------->TOE2(3)                       --------->ATHB12                       <---------ICU4                                  <---------ICU4                       <--------HAHB4                             ------>ZmHOX2a(2)                      --------->ICU4                            <---------ARR11(3)                      <---------YAB1                        <---------ANAC58     <---------ICU4   <---------ATHB12                      <---------AtLEC2    <---------YAB1  --------->YAB1         --------->HSFB2a(2)  --------->ARR11(3)  --------->YAB1 ------>ZmHOX2a(1)   <-----------GT1        <---------ANAC58 <----------DOF2   ------   actctcatcatttcatttcctctcatcattagcttcttttttcttcccaaacttattctattgcatgatctagtcatttcttttgctaacaatttgttag  16280700                                                  --------------------->WRI1                                                 --------->ATHB12                                                <---------YAB1                                          --------->YAB1           <---------RVE1(1)              --------->AHL20(2)           <---------CCA1(1)              <---------AHL20(1)          --------->ARR11(3)              <---------ICU4         <<<<<<<<<RAP2.2                  <--------ATHB1   --------->AHL20(2)                     --------->ATHB51   --------->AHL20(1) --------->TOE1(2)  <---------ATHB51              --------->REM1(1)        <----   <---------AHL20(2)------>ZmHOX2a(2)   <---------ATHB12    --------->ANAC58           --------->TOE2(3) ----->GT1<---------ARR11(3)             --------->ICU4      --------->ANAC58   <----------DOF2 <----   taaaattttttagatatttttgatccaaggagttttttttccaataatttttcattggtaagaacgccttcttacacctattctttttttcgtcaatttc  16280800                                                 --------->AHL20(1)                                                 <---------AHL20(1)                                                 <---------ICU4                                                 --------->ARR11(3)                                         <---------AHL20(2)                                         --------->AHL20(2)                                      <---------ICU4                                     <---------ATHB51                                     <---------AHL20(2)                                     --------->AHL20(2)                                     <---------ATHB12  <----------DOF2                                     --------->ICU4 <---------AHL20(2)                              -                             <----------DOF2     <---------ARR11(3)        --------->AHL20(2)       -        <---------AHL20(2)--------->ARR11(3)  --------->AHL20(2)           <---------AHL20(2)-------- ------->TEIL             <---------ARR11(3)  --------->YAB1           --------->ATHB12 --------->DAG2 -----ANAC58             <---------CCA1(2)   <---------AHL20(2)       --------->ICU4   ---------->DOF2 -----ANAC58             <---------GLK1(1)<---------AHL20(2)        --------->YAB1----------->GT1 ---   ttgcacctattttaaaaatgcaatttgatatcttttcaaataattaaataatattttctttgacaaactaaaatgatttatatatggcaaaaagcagaag  16280900                                                                                                 ----                                                                                     --------->TOE2(3)                                                                                   <-----------ARR10        <----------DOF2    --------------->AGL15                                   <---------ARR14(2)        <---------DAG2     <----------DOF2          --------->ANAC58               --------->GLK1(2)     <-----------GT1 <---------DAG2                 --------->ANAC58               <---------ARR11(1)    --------->AHL20(2)   ---------->ID1    --------->ICU4                          ------->TEIL ----- -------->ICU4       <----------DOF2       --------->AHL20(2)                     <---------ARR14(1) -------->AHL20(2)<-----------GT1     <---------TOE2(3)                           <---------CCA1(2) ->At4g35610     <-------TEIL<-----------TBP--------->ATHB12      ----------->GT1 <---------GLK1(2) ------>TOE2(3)<---------GLK1(2)   <---------AHL20(2)          ---------->DOF2 *TSS--------->ARR14(2)   cattaattaactttatagattcactttttctttttatattatggatttattagcaagacccaaaacaaaggtcaaaacagtcgcgaatctcaatacttcc  16281000                                                <---------MYB52(2)                                              --------->AtMYB61                                             --------->MYB46(3)                                            ----------->RAV1(1)                                           <---------ALFIN1                                           --------->AtMYB61                                           --------->ANAC46                                          --------->MYB46(3)                                      <-----------TGA1                                      <-----------HVH21                                     --------->TGA1a                                     <---------TGA1a                       <---------ZAT14                                     <---------O2   --------->ZAT6   <---------ICU4            <<<<<<<<<TBF1            --------->ANAC46             --------->YAB1         <<<<<<<<<TBF1  ----------------------->TaNAC69(2)       <-------TEIL                    <--- -->ZmHOX2a(1)    --------->ZAT14    --------->O2   <---------ALFIN1<---------YAB1              ----- ---->TOE2(3)  <<<<<<<<<TBF1         --------->bZIP60(1)     <---------ATHB12                  ------   tcaatctcttcttcttcttcttcactctctctctctctctcgtcaccaccactaacacttccactgattcatcattctccactgagaaacatttctctcg  16281100                                              <---------TOE1(2)                                            <----------DOF2          <---------ANAC46      --------->ZAT6                    <---------ZAT14              <---------ANAC58       <--------      <---------ALFIN1                >>>>>>>>>TAC1                  <---------ANAC58       <-------- ------MYB52(1)               <---------ARR14(2)                 <---------ANAC58  <---------YAB1 ---->TOE2(3)                 --------->ARR14(2)                 <---------ANAC58<---------ICU4 ----->GT1                   <---------MYB52(1)        <----------DOF2   --------------------->WRI1   ttaattcaacacttcaagtctctcactctccgtttcttcgagtgttctttggttctcctttgcattttcttgcgtctttggactcattactgtttcttac  16281200                                                                    ------>MYB46(1)                                                                    ------>MYB83                                                                --------->SPL7                                                                ------->TEIL                                                             --------->ANAC55(2)                                                             --------->ANAC58                     <--                                                             --------->ANAC58                 <------                                                             --------->ANAC46                ------>MYB83                                                            ------->TEIL                     ------>MYB46(1)                                                            --------------->AtSPL3         --------->MYB46(3)                                                            <---------------AtSPL3         <---------MYB55(2)    --------->LBD16                      <----------DOF2    --------------->AtSPL8     --------->MYB46(3) -ANAC58                          ------->TEIL            --------->ZAT14           <------ZmHOX2a(1) -ANAC58                  <------ZmHOX2a(1)               <---------ZAT14 <---------ARR11(3)<--------   tcaatccgaagaatgggaactagatggaggagaatgaaactagctttgggtctaaatctctgcacgtacctcccaagaactctagaggaatcacccactc  16281300                                                                   ------>NtERF2                                                         ----------->HVH21  ----------->HVH21                                                     <---------ANAC58     ------>ZmHOX2a(1)                                                     <---------ANAC46  ------>MYB83                                               --------->MYB52(1) <---------ALFIN1                                              --------->ZAT14   ------>NtERF2                                    <----------DOF2  <---------ANAC58  ------>MYB46(1) --------DOF2            <-----------RAV1(1)  <---------ZAT14  ----------->HVH21 ---ALFIN1         --------->ARR14(2)       --------->ANAC46   <---------ETT(1)               <------ -ALFIN1           <---------ARR14(2)     <---------ALFIN1     --------->ANAC46               -------   ctttgaattctacagagagactatccgatgttgctctgctttctccacttaactggcctatgactccgacaccttcctctcacggtctgaaattgtccag  16281400                                       ------>MYB83                                       ------>MYB46(1)                                      <---------ALFIN1                                     --------->MYB46(3)                               --------->ANAC55(2)                               --------->ANAC46                                           --------->WRKY12                          ------>ZmHOX2a(2)                                               --------->WRKY38(1)         <---------ARR11(3)  <-----------GT1                                            --------->At4g35610         --------->ARR11(3)<----------DOF2                     <---------ANAC58    <---------ICU4   -        <---------CCA1(2) <---------ICU4                       <---------ANAC58   --------->ICU4    <  --------->At4g35610   <---------ARR11(3)                     <---------ANAC46 --------->YAB1     -- ---HSFB2a(2)           --------->ARR11(3)      <---------GLK1(2)              <---------ZAT6      <- -->HSFB2a(2)    <---------TOE2(3) --------->PCF2      ---------->ID1        ----------->GT1  <------   aaacagctctaaatcttcaaaggtttgatctttacgagacccactctctcgattcttgttctattgcttgtttttggtttagtgataatgagttgacttt  16281500  Previous    Next  AGI:  At2g38970.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G54780.2); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G54780.3); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G54780.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70517.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61381.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21866.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); Range:  from: 16280979    to: 16283950    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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