Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    >>>                                                                                                  >>>                                                                                                  <--                                                                                                -----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                   <---------At4g35610                                                                            <---------YAB1 <---------WRKY12                                                                          <---------DOF5.7(2)  ------                   --------->ICU4                                       --------->DOF5.7(2)<---------WRKY38(1)                   <---------ATHB12     --------->GLK1(2)           --------->AtLEC2     ------>NtERF2           ----------->GT1             <---------GLK1(2)       --------->ANAC58    ------>ZmHOX2a(1)-      <---------TOE2(3)  ---------->DOF2--------->ARR11(3)     --------->ANAC58    ----------->RAV1(2)     ---------->DOF2--------->YAB1<----------DOF2              --------->ANAC46--------->ARR14(2)----   tgaatgttaaagatggaaacaatgatgcaaaggagactttagaatcttgttctaagaaatcaaacaggccatgcgataacgattcctctgaggccaacgc  16272100 >>>>>>E2Fc >>>>>>E2Fd ----NtERF2 ---->ANAC58 ---->ANAC46            --------->YAB1 ---->ANAC58            <---------ICU4 ------ID1             --------->ICU4 ->GAMYB           --------->ICU4                                        <----------DOF2 --------->DOF2    <---------YAB1         --------->ZAT14     ----------->GT1 -->NtERF2      --------->ICU4 <------ZmHOX2a(1)             ----------->GT1  ---------->ID1   gccaaagaaacagaagcagtgatgaataatgaaggagattgtagtttagtcacaaaatgcaagacgataaaaacacttttgtcttcttcttaaatcgata  16272200                                  --------->ANAC58                      <------MYB46(1)        <----------DOF2     <-------TEIL                                                            <        <---------DAG2<------MYB83--------->ANAC58                                               ----  --------->ANAC58   <---------DEAR3(1)                                                      --------  --------->ANAC58  <--------P  ---------->DOF2                                    <---------AHL20(2)   tatgaagcaacttttttttttggtaggcgatacatgaagcaacttgatatgtgttttgtttgttttggctaatagacaaaaacatttttttggtttcact  16272300            --------->WRKY12            --------->WRKY45            --------->WRKY38(1)         <---------ANAC46            <---------ARR11(3)        <---------TOE2(3)            --------->ARR11(3)   <---------AHL20(2)                <---------AHL20(1)   --------->AHL20(2)   <---------TOE2(3)                                  <---------DAG2 ---------ICU4 --------->ZAT6        --------->AHL20(1)                    <----------DOF2 ----->YAB1--------->DOF5.7(2)  ----------->GT1            <---------MYB46(3)                     <-- ->ZAT6<-----------GT1 ---------->DOF2      <---------TOE2(3)<---------MYB52(1)        <---------TOE2(3)   aatatttatttacgttgactctaactaaagtagaaggaaaatatttgacgaaaatacagagccgttggatttgatgactttatgagattgagattagttt  16272400                        --------------------->WRI1                       <---------ARR14(2)                       <---------MYB52(1)                   <---------LBD16      ------------>CBF                --------->ZAT2  <---------ICU4                           <------NtERF2                <---------ZAT2 --------->ICU4                           --------->LBD16     <----------DOF2   --------->ARR14(2)                              <---------ANAC46    <-----------------AGL3----------->GT1                             <---------LBD16 <----------DOF2--------->At4g35610 --------->PCF2                <---------ANAC58 ---------GT1   <---------At4g35610<-----------TCP11(1)           <---------ANAC58     *TSS       <--   tgactttctttttttgagagctgcggttttgtaaaaatggcccacaatttctctgaaaattcaaaattcagtgccggagattactcgtcgtagtcgtctg  16272500                                           --------->O2                                           <---------O2                                           ===============================================bZIP_DOF                                           <---------TGA1a                     ---------->DOF2                                           --------->TGA1a                  <---------HSFB2a(2)                                          ------->TEIL                      --------->HSFB2a(2)                                          --------->SPL7                   <---------LBD16                                    <---------ARR14(2)                     ------>ZmHOX2a(2)                                    --------->ARR14(2)                   --------->ARR14(2)                                   <------NtERF2                 =================HOX2a_HOX2a                                   --------->ATERF1(1)           <------ZmHOX2a(1)                                  --------->LBD16        <---------ANAC46<---------ARR14(2)         -                                 <---------ANAC46     ----------->HVH21 ============================= ---------HVH21                 <---------LBD16     --------->ALFIN1    <------ZmHOX2a(1)     <------   tgtcagatttagttctatttgcgatagtgcgaatggcggagacggacgtcggaagtgtgaaggggaaggagaaaggatcgggaaagcgctggattttgct  16272600                            <---------RAP2.6(3)                            <-----------HVH21                         --------->At4g35610                         <---------At4g35610                 <---------ARR14(2)                 <---------MYB52(1)                <---------SPL7                <---------RAP2.6(3)                                               --------->LBD16               <---------ANAC58                                                  <---------HSFB2a(2)               <---------ANAC58                                                  --------->HSFB2a(2)          --------->At4g35610 <---------ANAC46                                  <---------LBD16          <---------At4g35610<------NtERF2                                     <---------At5g28300 ----->ZmHOX2a(2)--------->ARR14(2) <---------DEAR3(1)              <---------GLK1(1) ======HOX2a_HOX2a    <---------MYB52(1)                   --------->ARR14(2)  --------->MYB52(1)   < ---At4g35610------>NtERF2 --------->DEAR3(1)          --------->YAB1         <-----------GT1       -   gatcggagctatagctgccgttctgttagccgtcgtggtcgctgtgtttttgaatactcagaattcgtcgatttctgaatttaccggaaaaatatgcaat  16272700          --------->ANAC55(2)          <---------ANAC55(2)          <------MYB46(1)          <------MYB83         --------->MYB111(1)         --------->MYB59         --------->MYB52(2)         --------->MYB46(2)       <--------P   <-----------RAV1(2)  <------NtERF2  <---------MYB52(1) <---------SPL7 <-----------HVH21         <----------DOF2 ------>NtERF2    <---------HSFB2a(2)                                    ------->TEIL <-----------TGA1 --------->HSFB2a(2)                               <----------DOF2 <---------RAP2.6(3)    <---------ARR11(3)                   --------->ATHB12                   ----- ---------ATERF1(2)     --------->ARR11(3)                  <---------YAB1                     <----- -------->ATERF1(2) ---------->DOF2 --------->GLK1(2)  <---------At4g35610             <----------DOF2   tgccgtcaggttaggtatttctaaaagctctttgtaagtttctgaattggatacttgagctcgtgattagctttgaatctcagcgattactttgattttg  16272800                                                                                                 ----                                                <---------At4g35610                             -----                                                --------->At4g35610                          ------->TEIL                                               ----------->RAV1(1)                        <---------YAB1                                             --------->At4g35610                       <---------YAB1 ---->ATHB12             <---------YAB1      <---------At4g35610  --------->MYB52(2)<---------YAB1 ----YAB1          <---------ATHB12 <---------MYB52(1)  <-------TEIL    <---------YAB1 --------->ICU4   atttgtatactagacttctcaatcgttttgattttgttgttaggctgagcagcagaagtacattgggatagttgaagattgttgttgtgattatgaaact  16272900                                                                                 <-------TEIL                                                                              <---------DEAR3(2)             --------->ANAC58                                                 <------MYB46(1)             --------->ANAC58                                                 <------MYB83             --------->ANAC46                                                 <---------MYB46(3)             --------->ANAC55(2)                                             --------->MYB59             --------->ANAC55(1)                                             <---------AtMYB61             <---------ANAC55(2)                                         <---------TOE1(3)          <---------REM1(2)                                              <---------TOE2(3)     --------->At4g35610                --------->ARR11(3)        <---------RVE1(1) <---------ARR14(2)                     <---------ARR11(3)        <---------CCA1(1)                <- --------->ARR14(2)--------->ALFIN1    <------ZmHOX2a(1)         --------->ARR11(3)                -- ----->At5g28300   <---------ZAT6<---------ANAC58                <---------ARR11(3)             ----- ------>GT1 <---------LBD16      <---------ANAC58           <-----------GT1 <--------P       <-------   gtgaatcggctaaacacggaagtgttgaatccattgcttcaggaccttgttaagacaccattttacagatatttcaaggttggttcatatttcttctttg  16273000  Previous    Next  AGI:  At2g38950.1    Description:  transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein. similar to transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein [Arabidopsis thaliana] (TAIR:AT1G08620.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40616.1); contains InterPro domain Transcription factor jumonji (InterPro:IPR013129); contains InterPro domain Transcription factor jumonji, JmjN (InterPro:IPR003349); contains InterPro domain Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347); contains InterPro domain Zinc finger, C5HC2-type; (InterPro:IPR004198) Range:  from: 16267931    to: 16272297    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g38960.1    Description:  AERO2 (ARABIDOPSIS ENDOPLASMIC RETICULUM OXIDOREDUCTINS 2); FAD binding / electron carrier/ oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / protein binding. Identical to Endoplasmic oxidoreductin-2 precursor (AERO2) [Arabidopsis Thaliana] (GB:Q7X9I4;GB:Q9ZV11); similar to AERO1 (ARABIDOPSIS ENDOPLASMIC RETICULUM OXIDOREDUCTINS 1), FAD binding / electron carrier/ oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / protein binding [Arabidopsis thaliana] (TAIR:AT1G72280.1); similar to putative endoplasmic reticulum oxidoreductin [Oryza sativa (japonica cultivar-group)] (GB:AAT78803.1); contains In Range:  from: 16272487    to: 16275245    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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