Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               <-----------GT1                                       ------>MYB46(1)       ---------->DOF2                 ------>MYB83                     --------->GLK1(2)    --------->AtLEC2                 <---------MYB59             <----------DOF2    --------->ANAC58              <---------WRKY18(1)         --------->ARR11(3)    --------->ANAC46             ----------->HVH21            <---------ARR11(3)    --------->ANAC58             --------->WRKY12            <---------CCA1(2)   <---------LBD16              ------>ZmHOX2a(1)   <---------ALFIN1   <---------GLK1(2)    <--------   ttatccacgcaaagaaacgttgttccaaattgtccttgacctaattttctcccaacactgtatatatctttgagattctctgtttttctcccaagaactg  16254200                                                                     ------>ZmHOX2a(2)                                                                    --------->HSFB2a(1)                                                                    <------ZmHOX2a(2)                                                                    --------->GLK1(1)                                                                   <---------ARR14(2)                                                                   <-----------ARR10                                                                   <---------ARR11(3)                                                                   <---------ARR11(1)                                                                   --------->ARR11(3)                                                                  <---------CCA1(2)                 <                                                             --------->ARR14(2)                   <--                                                       <---------ARR14(2)                        <---                                    --------->ZAT18    --------->ARR14(2)                        ----                                    <---------ZAT18<---------At4g35610   <----------DOF2      <------                                  ------->MYC3     <---------LBD16<---------ARR14(1)     <------MYB46(1)        --------->ETT(2)          <-------MYC3  <---------At4g35610--------->ARR14(2)    <------MYB83 -ARR11(3)             <---------SPL7      <----------DOF2   <---------ARR14(2)     ----------->HVH21   agtctatttgtagacctgcgcttgccatacgtttcatgtgcgcttctttcttctgcggtttcgaattcggatcttctttgttctctgtgataggttttgg  16254300                                                                                      --------->O2                                                                                      --------->TGA1a                                                                                      <---------TGA1a                                                                                      ===============                                                                                      <---------O2                                                                                      --------->ANAC55(2)                                     <---------ZAT18                                  <---------ANAC55(2)                                    <---------ANAC58                                  ===============MYC_MYB                                    <---------ANAC58                               --------->ARR14(2)                                  <---------MYB46(3)                               <---------ARR14(2)                                 <---------AtMYB61                        --------->ANAC46                                 --------->ALFIN1                         <---------DEAR3(1)                               <---------MYB46(3)                      ------>ZmHOX2a(2)           --------->WRKY38(1)--------->ALFIN1               <------MYB46(1)      <------ZmHOX2a(1)          <---------MYB52(1)  <---------DEAR3(1)            <---------DEAR3(1)<---------MYB46(3)   --------->ARR14(2)         <---------AtMYB61         --------->ALFIN1<---------ALFIN1   <---------ARR14(2)       <---------ZAT2             ------->MYC3    ==================HOX2a_HOX2a <---------MYB46(3)        <---------AtMYB61           <-------MYC3   <------ZmHOX2a(2)            <- ---------AtMYB61          --------->ALFIN1           --------->O2   --------->ARR14(2)           <-- -------MYB46(3)         --------->LBD16  <---------DEAR3(1)<---------AtMYB61--------->ALFIN1 <------ ------AtMYB61         <---------LBD16 <---------ZAT2 <---------ANAC46===================HOX2a_HOX2a ----->ALFIN1        <-----------GT1<---------ANAC46  <---------O2   <---------ARR14(2)      <-------GAMYB ---AtMYB61--------->WRKY12<---------DEAR3(1)--------->ALFIN1<------MYB83<---------LBD16----------->HVH21   tggtggttcttcgttggccattttcaccggaggtggtggtgtgctcggtgttggcaacgtggatggtgctggatccacggtggaggaaacgtgaccgtta  16254400                                                                                                -----                                                                                                <----           <---------DOF5.7(2)                                                                  <----         --------->DOF5.7(2)                                                               --------->TGA1a      <------NtERF2                                                                        --------->ANAC46     ------>NtERF2                                                                         --------->ANAC58   --------->ATERF1(1)                                                                     --------->O2   <------NtERF2                                                                           --------->ANAC58  <---------ATERF1(1)                                                                      --------->ANAC55(1) <---------bZIP60(1)                                                                     <---------ALFIN1 <---------ANAC58                                                                       <---------REM1(2) --------->bZIP60(1)                  --------->At4g35610                              <---------ALFIN1 <---------ANAC58          <----------DOF2      ------>ZmHOX2a(1)                      ----------->RAV1(1) <---------O2        --------------->AtSPL8    <---------ANAC58                      --------->LBD16 ==========================bZIP_DOF   <---------At4g35610                            ------>NtERF2 ----------HVH21<----------DOF2       <---------ZAT14                               --------->ANAC46- ---------RAV1(1)   <-----------GT1   --------->ZAT14<---------At4g35610         --------->ARR14(2)<- ---MYB52(1)<---------TOE2(3)  <-----------GT1 <---------ANAC58               <---------YAB1   ------   ctgtcgtcgccattaacgcttttatcgttcttttttcgactgctctcgtccttgctgctcttaatgctatcgtctggtttctgattccgccacacggcag  16254500                                               <-------MYC2                                               ------->MYC2                                               ------->MYC3                                          --------->ANAC58                                          --------->ANAC46                                          --------->ANAC58                                     <---------ARR14(2)                                     --------->PCF2                                     <---------TCP20                                     <---------TCP15(1)                                     --------->ARR14(2)                                 <-------TEIL------->TEIL                                --------->ARR14(1)                                --------->GLK1(2)                               <---------ARR14(2)                          ---------->DOF2          < --------->MYB52(1)            --------->ARR14(2)                       --------->TOE2(3)       <---- ---->At4g35610                <---------GLK1(2)                        --------->TOE1(3)       <---- --NtERF2                      --------->ARR11(1)                       <---------MYB59        <----- -----At4g35610              ----------->ARR10 <-------MYC3          <-----------GT1     ------>MYB46(1) ---------->HVH21          <-------TEIL--------->MYB46(3)      <---------AHL20(1)        ------>MYB83 --------MYB52(2)      <---------TOE2(3)<---------ALFIN1       <---------AHL20(2)      --------->TOE2(3) ----->RAV1(1)      <---------MYB52(1)--------->DEAR3(2)       --------->AHL20(2)      <---------MYB59   cactaacggattgaaggaatccattagggttcagattcggacccacgcatgtgtttcccattcaaaaaatttaacctaaaatcacaaaacctaattttgc  16254600                                                        --------->ANAC46                                                        --------->ANAC58                                                 --------->YAB1                                            ------------>CBF     --------->YAB1       <-----------GT1                     ------>NtERF2--------->ANAC58 ----------DOF2                            ----------->RAV1(1)   --------->ATHB12           ------->TEIL -----ANAC58             <---------GLK1(2)----------->HVH21     <---------ATHB12       --------->YAB1 -----ANAC58           <---------TOE2(3)  <---------ETT(1)  --------->MYB46(3)        --------->ICU4 -------------------ANAC81                --------->ANAC46 ------->TEIL <-----------TGA1 <---------YAB1   ttctttttttttcttctctctgtttgagattatctattacttctccgacaatgaaaacacgaaccactcattagcgtcatcaacgtgaatgatgaatcca  16254700                                            --------->TOE2(2)                                            --------->TOE1(2)                                    --------->At5g28300      --------->MYB46(3)          <---------ANAC46         ----------->GT1         <-----------GT1           --------->TOE2(3)          <---------ANAC55(1)     <---------DEAR3(1)      --------->WRKY38(1)      -------->P          <---------ANAC58     --------->At4g35610      <------------CBF       --------->ANAC58  ----          <---------ANAC58     --------->ZAT2         <---------AHL20(2)       --------->ANAC58  ----     --------->KAN4(2)         <---------ZAT2    --------->ARR11(3)            --------->ANAC46  <---     <------------CBF          <---------At4g35610--------->ICU4           --------->ANAC58      <---    <---------KAN4(1)      <---------ALFIN1----------->RAV1(2)             --------->ANAC58    ------   tatagaatattgccgtgtcttcaaaatcgacacagctcggtgaaaacctgagataatgaattgaccacctaagtcgctcgcaagcaaccttgttctgcac  16254800                                                                                <---------At4g35610                                                                                --------->At4g35610                                                                           --------->At4g35610                                                                         ------>ZmHOX2a(2)                                                                         ============================HOX2a_HOX2a                                                                        =============================HOX2a_HOX2a      --------->ARR14(2)                                                --------->CCA1(2)      <---------ARR14(2)                                                <------ZmHOX2a(2)    --------->LBD16                                                    --------->GLK1(2)   <---------HSFB2a(2)                                                 --------->ARR11(3)   --------->HSFB2a(2)                                                 <---------ARR14(3)   <---------ANAC46                                                    <---------ARR11(3)  <---------LBD16                                                      <---------AGP1<---------YAB1 --->MYC2                                                              <---------ARR14(2) --->MYC3                           ----------->GT1                    --------->ARR14(2) ----MYC3          --------->HSFB2a(2)        ----------->GT1          --------->ARR14(3)      ------ ----MYC2          <---------HSFB2a(2)     <-----------RAV1(1)       ----------->ARR10        <------ZmHOX2a(1) ->TEIL--------->CCA1(2)          <------------CBF    --------->ATHB12 <-----------ARR10   --------->At4g35610   gttttccggatacaaaatggtcgagaaacgtcttggaattgtaaaatgtggctaaatgatttgattcggagaagatctgatgagctgatgatcagaggag  16254900                                                    <-----------GT1                                           <---------RAP2.6(3)                                           ------>NtERF2                                           --------->ORA47(1)                                          <---------ANAC58                            <------ZmHOX2a(1)    <---------ICU4                        ---------->DOF2   <---------ANAC58                     --------->ANAC58     --------->DEAR3(1) <---------ARR14(2)                     < --->ALFIN1          --------->ANAC58    --------------->AtSPL3              <-----------GT1  -------   gggaagaaggaacgagagagaacaaggaaaggactatgccattgccgtccatttttacgagaaaatatggaaagtttttttacagagcccaattttagac  16255000                                                                    --------->AHL20(2)                                                           --------->AHL20(2)                                                           <---------AHL20(2)                                                           <---------AHL20(1)              <---------AHL20(2)                                                        <---------AHL20(2)           <---------WOX13(1)                                                       <---------AHL20(1)           <---------ANAC58                                                   <---------AHL20(1)               <---------ANAC46                                     <---------AHL20(2)--------->AHL20(2)           <---------ANAC58                                     --------->AHL20(2)<---------AHL20(2)--------->AHL20(1)<---------AHL20(1)       <----------DOF2            <----------DOF2  --------->AHL20(2)    <---------AHL20(1)--------->AHL20(1)       <---------DAG2     <----------DOF2          <---------AHL20(2)   --------->AHL20(2)--------->AHL20(2) ------ZmHOX2a(1)      <---------ARR11(3)    <-----------GT1<---------AHL20(2)<---------TOE2(3) -->ZAT6     --------->YAB1     ---------->ID1     --------->AHL20(1) --------->AHL20(2) <---------YAB1   taggactcacttttatcaaaaacaatttctttttgtcttttaatttttaacaattaattaatttttttgaaaaaatatataacgttgagtgattatattg  16255100  Previous    Next  AGI:  At2g38910.1    Description:  CPK20 (calcium-dependent protein kinase 20); calmodulin-dependent protein kinase/ kinase. similar to CPK1 (calcium-dependent protein kinase isoform AK1), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT5G04870.1); similar to CPK2 (CALMODULIN-DOMAIN PROTEIN KINASE CDPK ISOFORM 2), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT3G10660.1); similar to CPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT2G17290.1); similar to calcium-dependent protein kinase 2 [Nicotiana tabacum] (GB:CAC82998.1); similar to unnamed protein prod Range:  from: 16252292    to: 16254561    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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