Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            <---------ARR14(2)                                                                          --------->ARR14(2)      ---                        <---------GLK1(2)                                ------>MYB83            ----             <---------At4g35610                                         ------>MYB46(1)     <-------             --------->At4g35610                              <---------AHL20(2)             --------             --------->ZAT2                                  --------->AHL20(2)              --------      <-----------RAV1(1)             <---------TOE2(2)      <---------AHL20(2)              <------- -->ANAC46   <---------ZAT2 <----------DOF2       --------->TOE1(2)   ----------------->AGL2<--------   ctctccttgtgctggagctggacacaaattctttaagaccgaggttttcaaacgtaggcccaaataaatagaaccaaatccagttagaagcccaataaaa  16245200      --------->ANAC55(2)      <---------ANAC58      <---------ANAC58      <---------ANAC55(2)    <---------AHL20(2)    --------->AHL20(2)    <-----------GT1                  <---------TOE2(3) ------>TOE2(3)                      <---------TOE1(3) ------->GT1                        ---------->DOF2                                       <<<<<<<<<GATA-3 --AHL20(2)          <---------AHL20(2)                                                   <<<<<<<<<GATA-2 ->AHL20(2)         <---------AHL20(2)         <---------RVE1(1)           <----------DOF2<<<<<<<<<GATA-1 ->AHL20(1)         --------->AHL20(2)     <---------TOE2(3)            ---------->ID1    <<<<<<<<<GATA-4 --AHL20(1) <----------DOF2      <----------DOF2    <-----------GT1--------->GLK1(2)     --------->ARR14(2) -ATHB12  <---------YAB1      ---------->ID1 <------ZmHOX2a(1)---------->DOF2       <----------DOF2 <   tgttaattacttatctttgtattttaatttttgttctttaaagtttaggattttttacataagtaaaagaatttgttctttaggcactttgaatccacat  16245300                                                                                                    -                                                                                                    -                       --------->TOE2(3)                                                            <                       --------->YAB1                                                               -                     <---------ARR11(3)                                                             <           <---------YAB1                                                                           <         ----------->GT1                                                            --------->AHL20(2)    <------MYB83     --------->ARR14(2)       <---------ANAC46                      <---------AHL20(2)    <------MYB46(1)  <-----------ARR10       <---------TOE2(3)                  <---------YAB1      -   <---------TOE1(2) <---------ARR14(2) <---------AHL20(2)           <---------AHL20(2)            <-   <---------TOE2(2) --------->ARR11(3) --------->AHL20(2)          --------->AHL20(2)             <-  <---------MYB52(1) --------->GLK1(2) --------->AHL20(2)           <---------AHL20(2)             -- <-------GAMYB<---------YAB1       <---------YAB1       <---------AHL20(2)     <---------TOE2(3)   <- ---------MYB46(3)  <---------ARR14(1) <---------AHL20(2)--------->ATHB12  ------->TEIL<---------GLK1(2)   tgtcgttggtattgttattagagtatcttaattttctatgatttatttacgtagataattcattgaaaaattaaatgaatttatgtttaaattctcatct  16245400  <---------YAB1                                                                      <---------ANAC58 -------->YAB1                                                                        <---------ANAC58 ------->ATHB1                                                                   <---------AHL20(2) ---------AHL20(2)                                                              --------->AHL20(2) -------->ATHB51                                                              ------>MYB46(1) --------HAHB4                                                       --------->AHL20(2) ---------ICU4                                                       --------->AHL20(1) ------->HAHB4               <---------MYB52(1)                      <---------AHL20(2) --------ATHB51             --------->TOE2(3)                        <---------AHL20(1) --------ATHB12     --------->DAG2                         <------------CBF   ------>MYB83 ------->ICU4      ---------->DOF2                       <---------AHL20(2) <---------MYB59 --------YAB1 <---------WOX13(1)                      --------->TOE2(3)  <-----------GT1           <-   aattattatacaatagattgaaaaagtcacccttagtcaaattgttcatatagttttcttaaattgtctaattaattaccaaattaatccttgtctgaaa  16245500                                                        --------->ANAC46                                             <---------CCA1(2)           <---------ANAC58                                           --------->YAB1                <---------ANAC58                                           <---------ICU4                <---------ANAC46      ---------->DOF2               <-------MYC3      *TSS   <-----------HVH21                 ------ ---------DOF2                      ------->MYC3    ----------->TBP<------NtERF2        <---------GLK1(1)   acttttacaaaagctaatacagaacaaatacaaaaaaacgtgtaatcatatcatataaacaccagtcgcagcgtttcgtagaaaaattcgatttctctaa  16245600                                                               --------->ANAC58                                                               --------->ANAC46                                                               --------->ANAC58                                 --------->ARR11(3)     --------->GLK1(2)                                 <---------ARR11(3)     <---------ARR14(2)                      --------->LBD16                   --------->ARR14(2)             ---------->ID1                     --------->ANAC46    --------->GLK1(1)    --------->SPL7         <-----------RAV1(1)                  <---------ARR14(2)     <---------GLK1(1)--------------->AtSPL8<----------DOF2<----- ---->DOF2        --------->ARR14(2)>>>>>>>ZML2      --------->LBD16       <---------GLK1(1)   ------   agccctaaaactaaaacgactatccccaattccaagttctagggtttccatcttccccaatctgtacgccattttcgatttccttttttgttgtttactt  16245700                                                                     --------->ANAC46                                                                     --------->ANAC58                                                                  <---------ARR14(2)            <----                                                                  --------->ARR14(2)           ------                                                                 <------NtERF2                <------                                                                <---------MYB46(3) <---------At4g35610                                                               <---------ANAC46    --------->At4g35610                              <---------ANAC58                 <---------ANAC58    --------->ZAT2                              <---------ANAC58                 <---------ANAC58    <---------ZAT2  --                 <---------TOE1(3)                            <---------LBD16      ----------->RAV1(2)  <-------TEIL   <---------TOE2(3)                  <---------ANAC46 --------->ANAC58        <------- -----DOF2       --------->MYB59    <---------MYB46(3)  <---------YAB1           <-----------RAV1(2)- --------------->WRI1         <---------ANAC46      ----------->GT1--------->CCA1(2)       --------->ALFIN1   tagcttcatcgaccatgtttaggtttcaaattgagtgtttgttctgtttctgtagagtataaatggcggatacgccttcgagcccagctggagatggcgg  16245800                     <---------ZAT2             <-------GAMYB             <-----------HVH21            <---------ANAC46         --------->ARR14(2)        <-------GAMYB<---------At4g35610       --------->ABI4(2)       <---------DEAR3(2)       <---------MYB46(3)       <---------ATERF1(1)      <---------DEAR3(1)                                                                  --------->ATHB12     <------NtERF2   --------->At4g35610                                                 <---------YAB1    <---------RAP2.3(1)                                     --------->YAB1           --------->YAB1    <---------DEAR4(2)                                     <------ZmHOX2a(2)     ------>ZmHOX2a(1)    ------------>AtMYB77  --------->ARR14(2)               =============================HOX2a_HOX2a   <---------DEAR3(1)--------->ZAT2    ===========================HOX2a_HOX2a <---------------AGL15   <---------RAP2.3(2)   <------ZmHOX2a(1)                --------->ARR11(3)  ------>NtERF2 --NtERF2<---------ARR14(2)            ------>ZmHOX2a(1)  <---------ARR11(3)  --------------->AGL15 --->LBD16  <---------ANAC58        ------>MYB83     <---------At4g35610     <-----------------AGL1 ---ANAC46  <---------ANAC58====================================HOX2a_HOX2a <---------ANAC58 -------->DOF2<<<<<<<<<MYB98------>ZmHOX2a(2)        --------->ZAT2---------->DOF2--------->MYB52(1) --LBD16--------->ATERF1(1) ==================HOX2a_HOX2a<------ZmHOX2a(1)  <---------ANAC58 -------->DAG2<---------MYB52(1)    ------>MYB46(1)  --------->At4g35610  --------->WRKY38(1)    ----   agaaagcggcggttccgttagggagcaggatcgataccttcctatagctaatatcagcaggatcatgaagaaagcgttgcctcctaatggtaagattgga  16245900                     <------ZmHOX2a(1)                  <---------LBD16                 --------->ZAT14           --------->CCA1(2)          <---------ARR14(2)                            <---------ANAC46          --------->ARR14(2)                   --------->REM1(1)         <------ZmHOX2a(1)                    <-------TEIL       <---------TOE2(3)                <---------At4g35610       <---------TOE1(3)  <---------ANAC58 --------->At4g35610                    <----------DOF2    XXXXXXXXXXXXXXXXXXXX>MIR2111B*   <-------TEIL --------->ZAT6            <-----------GT1 ------>DOF2<-------TEIL  <---------ANAC58 <---------At4g35610           <---------DAG2   aaagatgctaaggatacagttcaggaatgcgtctctgagttcatcagcttcatcactagcgagtatgcattcccaatttttcttctttcaatcgaatttg  16246000                  ----------->GT1               <----------DOF2             ===========================================================================MADS_MADS             <---------------AGL15             <----------DOF2          <-----------GT1      <---------AHL20(1)              <---------MYB46(3)      --------->ARR11(3)              <-----------RAV1(1)      --------->AHL20(1)          --------->ATHB12    <---------ARR11(3)    <---------AHL20(2)                                    <---------STY1(2)    --------->ARR11(3)    --------->AHL20(2)                            --------------->AGL15    <---------AHL20(1)    --------->AHL20(1)                            <---------------AGL15    <---    --------->AHL20(1)   --------->AHL20(2)    <----------DOF2         --------->TOE2(3)         ----   ttggaaaatattttgctctttggtgaaaaaaattgatcatttgttggaactttgggtttgtgagagatagttttcttaaactagctatggattgagttta  16246100  Previous    Next  AGI:  At2g38880.1    Description:  ATHAP3/ATNF-YB1/HAP3/HAP3A (NUCLEAR FACTOR Y SUBUNIT B1); transcription factor. Identical to Nuclear transcription factor Y subunit B-1 (NFYB1) [Arabidopsis Thaliana] (GB:Q9SLG0;GB:O23633); similar to CCAAT-box binding transcription factor subunit B (NF-YB) (HAP3 ) (AHAP3) family [Arabidopsis thaliana] (TAIR:AT4G14540.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69013.1); contains InterPro domain Transcription factor, NFYB/HAP3, conserved site; (InterPro:IPR003956); contains InterPro domain Transcription factor CBF/NF-Y/archaeal histone; (InterPro:IPR003958); contains InterPro domain Transcription factor, CBFA/NFYB, DNA top Range:  from: 16245554    to: 16247912    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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