Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          <------NtERF2       <------NtERF2       <---------ATERF1(1)       ------>NtERF2       <---------RAP2.6(3)      --------->DEAR3(1)      --------->ANAC58      --------->ANAC58      --------->RRTF1(3)                                                                            <      --------->RRTF1(2)                                                                         ----      --------->ATERF1(2)                                                                        <---      <---------ATERF1(2)                                                                       <----      --------->RAP2.6(2)                                                                       -----      --------->RAP2.3(2)                                                                       <----      --------->DREB2C(2)                                                                       <----      --------->RAP2.3(3)                                                       <---------WRKY45<----     --------->RAP2.3(1)                                                        <---------WRKY38(1) <     --------->SPL7                                     <---------GLK1(2)       <---------WRKY12<----    --------->ATERF1(1)                                 --------->ARR14(2)     --------->WRKY18(1)<--    ------>NtERF2                                  <---------ANAC46       --------->O2          <----    <---------ATERF1(1)                          <----------DOF2         ------>NtERF2         <-----   <---------SPL7                               <---------GLK1(2)      <------NtERF2           <-----   --------->LBD16                          <------ZmHOX2a(2)         ------>NtERF2--------->ANAC58--   ------>NtERF2                           <---------ARR11(3)        --------->ANAC58          <-----  <---------RAP2.6(2)            <---------At4g35610    <---------ARR14(2)<---------O2         <----- <---------LBD16            ----------->HVH21  --------->At4g35610   --------->ANAC58        <------- ------>ARR14(2)            <---------YAB1 --------->ARR14(2)    --------->ARR14(2)--------->ANAC58-- -------ARR14(2)    ----------->RAV1(2)    --------->ARR11(3)    <---------ARR14(2)--------->ANAC46<- ---ZmHOX2a(1)    <---------ARR14(2)       <---------ARR14(2)<---------------------WRI1--------->GLK1(1) ----->HSFB2a(1)  --------->ARR14(2)     ----------->ARR10 <---------DEAR3(1) <-----------HVH21<----- --ANAC46     --------->At4g35610<---------ZAT2<---------At4g35610   --------->ANAC46  <---------CCA1(2)   gattccggccgccatcagcataacctggctatgacagctagtgaagatcagcttcttggattcggcgaatcgcgccacgaggtcaacgcatttctcgtcg  16241900       --------->HSFB2a(1)       --------->HSFC1(2)                                      --------->TGA2(2)       <---------HSFB2a(1)                                    <-----------HVH21       --------->At4g35610                                    <-----------TGA1       --------->ZAT2                                        --------->bZIP60(2)       <---------HSFC1(2)                                    --------->ANAC58      ----------->ARR10                 --------->TGA2(1)    <---------bZIP60(1) ------NtERF2                           <---------TGA2(1)    --------->ANAC58 ----->ATERF1(1)                        --------->bZIP60(1)  <---------bZIP60(2) ---NtERF2                              <---------O2         <---------ANAC55(2) -----ATERF1(1)                         <---------bZIP60(2)  <---------ANAC46 ->NtERF2                               <---------bZIP60(1)  --------->ANAC55(2) -----RRTF1(1)                          --------->O2         --------->TGA1a -----ERF1                              >>>>>>>>>>HY5        >>>>>>>>>>HY5 -----DEAR3(2)                          <---------ANAC46     ===============================bZIP_DOF ----------CDC5                      ----------->TGA1        ======================================== -----RAP2.3(1)                    --------->YAB1            --------->bZIP60(1)                  --- -------DEAR3(1)          ------>ZmHOX2a(1)                  --------->O2                        ---- -----ORA47(2)            --------->HSFB2a(2)                <---------O2                      <----- ----DEAR3(1)<---------MYB52(1)    <---------ICU4            <---------TGA2(1)                <------ ----RAP2.3(3)            --------->LBD16                    --------->TGA2(1)                <------ ------->At4g35610      --------->ZAT2 ----------->STF1      <---------TGA1a            <---------At4g35610 ----DREB2C(2)          <---------ZAT2<---------TGA2(2)     <-----------STF1          <---------WRKY38(1) ----At1g77200  <---------ARR14(2)--------->ICU4            ----------->STF1          <---------WRKY12 ----HVH21 <---------ANAC46     --------->YAB1            ----------->TGA1       ---------->DOF2 ---- ---->NtERF2--------->LBD16    --------->ICU4         --------->LBD16       <---------ANAC58  <------ --------At4g35610      ----------->RAV1(2)----------->GT1----------->HVH21 <---------ANAC58 -------- ----RAP2.3(2)  --------->ARR14(2)<---------YAB1    <---------LBD16         <---------ANAC46<--------   gcgctgagaagctccgtgaatcggcctcctgggatgatgatgacgtcgtaattctccggagtgacgtcatcgaagtttgcgtttaaagtcaactggtcaa  16242000       <---------ANAC46      <---------DEAR3(1)   --------->ZAT2   <---------ZAT2  --------->ANAC58  --------->ANAC58 =====MYC_MYB ---->GAMYB ----->ANAC46 ----DOF5.7(2)                                                      --------->HSFC1(2) ---WRKY38(1)                                                 ---------->DOF2 ---WRKY12                  ----------->GT1          --------->YAB1 <---------HSFB2a(1) ----->MYB46(3)       --------->HSFB2a(2)           <---------YAB1  --------->HSFB2a(1) ---WRKY45            <---------HSFB2a(2)         --------->YAB1    <---------HSFC1(2) ->WRKY18(1)     <----------DOF2                  <---------ICU4  ---------->DOF2        ----------->GT1 ---HVH21        <---------DAG2          ---------->DOF2---------->DOF2       <-------TEIL         --   cgacaagctcggtgtatagcttttttagaacagaaaaacaaaattaagcgaattatcacaaagaaaaagaaagttcgaaattcgttttagtgggaaaatt  16242100                                                            <------MYB83                                                            <------MYB46(1)                                                            ----------->GT1                                                           <------MYB46(1)                                                           <------MYB83                                                           <---------MYB46(3)                                                         <---------MYB52(1)                                                         <--------P                                                        <-------GAMYB                                                       <---------MYB46(3)                                                      <---------ANAC58                                                      <---------ANAC46                                                      <---------ANAC58                                                 <---------DEAR3(1)                                                <------NtERF2                                               ------>NtERF2<---------ANAC58                                               --------->LBD16                                              <---------DEAR3(1)                                              <---------ATERF1(2)                                              --------->ATERF1(2)                                              --------->DEAR3(1)        <---------ATHB12                                             --------->ATERF1(1)        <---------MYB52(2)                                          <------ZmHOX2a(2)--------->MYB55(2)    -------->P                                      <------NtERF2   <---------RAP2.6(2)  ------->TEIL             --------->ANAC58     --------->ANAC46<-------GAMYB    --------->ANAC58       --------->ATHB12             --------->ANAC58   --------->MYB52(1)<----------DOF2  --------->ANAC58    --------->MYB52(1)             --------->ANAC46   ---------->DOF2<---------ATERF1(1) --------->ANAC46------->GAMYB        ------>NtERF2   --------->At4g35610  <---------LBD16<---------ANAC46--------->ANAC58 ------->ARR14(2)       <---------At4g35610------>ZmHOX2a(2)<---------ANAC58--------->ANAC58   ggaacctcgaggcccaagaaatcgtgggcagacataacgcagcgatcgccggcgttgcggttgggtgaaacgcaatgaacgctaaccccaaacgattgga  16242200                                                                               --------------->AGL15                                                                               <---------------AGL15                                                                              ----------------->AGL3                                                                              ----------------->AGL2                                                                              <-----------------AGL1                                                                              <-----------------AG                                                                              ----------------->AG                                                                             ------>NtERF2                                                                          --------->At4g35610                                                                          <---------ATERF1(1)                                                                          <---------At4g35610                                                                         --------->DEAR3(1)                                                                      --------->DEAR3(1)                                                                      ------->GAMYB            <---------HSFB2a(1)                                      --------->MYB46(3)           <--            --------->MYB46(3)                                       --------->DEAR3(2)           <--            --------->KAN4(1)                                       ------->TEIL                  <--           <---------KAN4(2)                --------->ANAC46 <---------GLK1(1)----------------->AGL1         <------ZmHOX2a(1)                <---------ALFIN1   --------->GLK1(1)<-----------------AGL2   gaacatagagaggaacaatcgtttcataggcttccatgtagtctccacataagagcaacgctgatttctgaaccgccgatgccattttgggtaaatgttt  16242300                                                                                              <------                                                                                         ------->GAMYB                                                                                       ------>MYB46(1)                                                                                       ------>MYB83                                                                                     <---------ALFIN1                                                                                     <---------MYB111(1)                                                                                     --------->MYB46(3)                                                                                     <---------MYB111(2)                                                                                     --------->AtMYB61                                                                                     <---------MYB55(2)                                                                                   ------>NtERF2             *TSS                                                                 <---------ALFIN1             ------------>CBF                                                     --------->ANAC46  <---------AtLEC2                          <---------YAB1                       <---------MYB55(2) <---------ZAT14                            --------->ICU4                       --------->MYB46(3)<- --------->ZAT18                         <-----------GT1     <---------O2       <---------ALFIN1   <- -------ANAC46                       <-----------TBP         <---------ANAC46  --------->ANAC46    <- -------ANAC58                   --------->TOE2(3)       <-----------HVH21 --------->ARR14(2)<------- -------ANAC58                   --------->YAB1  <-----------GT1     <----------DOF2--------->MYB46(3)   gtgtgcattgaataagacaatataagaagaactaatcttatttatactgattatctatttgtcatgtggaacttttgaatccccccaccaactcactttc  16242400               <---------ANAC58               <---------ANAC46               <---------ANAC58   --------------->AGL15   <---------DAG2   <----------DOF2   <---------------AGL15  <-----------------AGL3  =====================================================================================MADS_MADS  <-----------------AGL2 ------>MYB46(1)                                     <---------AHL20(1) ------>MYB83 <------NtERF2                <---------ICU4 -----HVH21 <---------RAP2.6(2)           ------>ZmHOX2a(1) --------MYB111(2)                        <---------YAB1 --------MYB111(1)                        --------->ICU4<---------AHL20(2) <---------AtLEC2         < --------MYB46(2)  ---------->DOF2 ---------->DOF2   --------->AHL20(1)<----------DOF2      <-------- ---DOF2 <---------AtMYB61    ----------->GT1       --------->AHL20(2) --------------->AGL15---------   acctactttttttggtggcttcaaagtccaactggtgaaaagtccttattacaaatatataaactagctataactttgaatggtatgtagtttctgctaa  16242500                                                                                                    <                                                                                                  <--                                                                                                  ---                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                <----                                                                                                <----                                                                                               <-----     <-----------RAV1(1)                                                                      <------  <---------AHL20(2)                                                                          <------MYB46(1) --------->YAB1                                                                            <---------MYB52(1) --------->AHL20(2)                                                                     <-------TEIL- ---------YAB1                                                                     <-----------GT1<-- -At4g35610                                                                     <---------YAB1<------MYB83 >At4g35610             --------->ICU4                                         <---------AHL20(2)----   ctattatatgtggctgaattggtatacttatgaaatggacattgaattggtatacttatgttgaatagttccattttgtattattttacatccatttggt  16242600     --------->YAB1 ---------ANAC46 ----MYB46(1) -------->GT1 ------AtMYB61 ------MYB46(3)                                                                                   --- ----->MYB46(2)                                                               <---------TGA1a     --- ----->MYB55(2)                                                               --------->TGA1a     <-- ----->MYB111(1)                                                              <---------O2      <---- ------DEAR3(1)                                                          ----------->HVH21      ----- -----MYB55(1)                                                          ------->MYC3            <---- ----P--------->AHL20(2)                                                <-------MYC3          <------ --GAMYB--------->YAB1                                     <---------AHL20(2) --------->O2 <-------TEIL ---MYB46(3)                                        ------->TEIL<---------AHL20(2)     <---------TOE2(3) ---------->GT1                                <---------ANAC46--------->AHL20(2)      <---------TOE1(3) ----MYB83   <----------DOF2           --------->ANAC46 ------->TEIL  ------->TEIL    --------->MYB52(1) ----->MYB111(2)   <--------P    <---------ANAC46<---------ANAC46   <---------ZAT18   <---------DOF5.7(2)   tggtgtaaaataatacttttggtagattgaatgtgatgtatacaaaacgtcgtgtatgtatttcatttaatgcacatgactcgtgagttaacgttcagag  16242700      <---------LBD16          ---------->DOF2 ------>SPL7               --------->ARR11(3)                                               ------->TEIL ------>ZAT14        --------->HSFB2a(2)                                               --------->REM1(1) -------ZAT14        <---------HSFB2a(2)                                              <-------TEIL -----ZAT14       --------->GLK1(2)                                                <---------At4g35610 ---->ZAT14--------->ANAC58--------->GLK1(2)                  ----------->RAV1(2)  --------->At4g35610 -----SPL7 --------->ANAC58<---------ARR11(3)     --------->ICU4            <---------ARR11(3)    <-- ---------AtSPL3 <---------GLK1(2)    --------->YAB1      ---------->DOF2   --------->ARR11(3)   <---   tacggtctctcggaagctagaatctagaaaatctaaagaatgatatgtagccatgtttaccaaagcctggactatggagaacttgagctacatgaatctc  16242800  Previous    Next  AGI:  At2g38860.1    Description:  YLS5 (yellow-leaf-specific gene 5). similar to DJ-1 family protein [Arabidopsis thaliana] (TAIR:AT3G54600.1); similar to hypothetical protein OsI_035516 [Oryza sativa (indica cultivar-group)] (GB:EAY81557.1); similar to Os11g0591600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068186.1); contains InterPro domain ThiJ/PfpI (InterPro:IPR002818) Range:  from: 16240393    to: 16242313    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version