Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <-------TEIL   <---------YAB1  <---------AHL20(2)                                                                              ---  --------->AHL20(2)                                                         --------->AHL20(2) <---- --------->YAB1                                                       ----------->HVH21       <------ ---------YAB1                                                        ------->GAMYB    --------->ANAC58 ------YAB1   <---------TOE2(3)                          ---------->DOF2     <---------AHL20(2) ----- ----->GT1   ---------->DOF2   ----------->GT1   --------->YAB1     <---------At4g35610--------->ANAC58   ttattaaaattcgtctaaagttgatgaaattgatggtttataagagaaaaatcatataacaaagttgtttaactgacatttatttggataagctatataa  16234000        ------>ZmHOX2a(2)      <---------ARR11(3)                                                                          <--  <---------ANAC55(2)                                                           --------->YAB1   ----  --------->ANAC55(2)                    ----------->GT1           --------->ANAC58              ---- ------>YAB1                             --------->At4g35610       --------->ANAC58   --------->ANAC46 -----AHL20(2)         <---------YAB1   --------->ANAC58   --------->ANAC58    <---------YAB1    ---- ---AHL20(2)<---------WOX13(1) <----------DOF2    --------->At4g35610     <-----------GT1        ---- ---->AHL20(2)       --------->YAB1     --------->ANAC58   --------->ANAC58 <---------YAB1       ----   aaataagtgatctaattggcaaattagaattgacttttgcataagctaaataagcttacataagcatgtaagcaaattactataataccctcaagagcca  16234100              >>>>>>>>>ARR1            <---------YAB1  <---------ZAT2  --------->At4g35610  <---------At4g35610    ----------->GT1 ---------HVH21       <------------CBF     <-----------HVH21  --------->ATHB12 ----->ANAC58 <------------CBF            ----------->GT1   <---------WOX13(1) ----->ANAC58 >>>>>>>>>ARR2              --------->MYB59   <------------CBF                        == ----->O2   <---------TOE1(3)         <------------CBF    --------->ATHB12              --------->ANAC46 ----->TGA1a<---------TOE2(3)    --------->ANAC58      <------------CBF     <---------ICU4         <- ----->bZIP60(2)----------->GT1  --------->ANAC58   ------------>CBF    <---------MYB46(3) <---------   agtcagcagatgttaagattgtaaaattggtaagaacgctaattgggtcaaatcgacaattgattgatttgggtttgttcattacattacccgctttgct  16234200                                                                     --------->GLK1(1)                                                                  <---------TOE1(2)                                   --------->ZAT18                --------->LBD16                                   <---------ZAT14        ------>MYB46(1)                                   --------->ZAT14       <---------ALFIN1      ======================                                   <-------TEIL         --------->MYB46(3)    <------ZmHOX2a(2)                                   <---------ABI4(2)   --------->ANAC58       =======================                                  --------->ALFIN1     --------->ANAC46       =======================                               <---------MYB46(3)      --------->ANAC58      <---------ARR11(3)               <---------ZAT6  --------->LBD16      --------->SPL7<---------TOE2(2)      <<<<<<<<<TBF1          ==================HOX2a_HOX2a             <-------TEIL <-----------RAV1(2)  <<<<<<<<<TBF1    --------->TOE1(2)         <---------ANAC46  --------------->AtSPL8       --------->ARR11(3)    --------->TOE2(2)   <---------CCA1(2) --------->GLK1(2)     --------->LBD16------>ZmHOX2a(2)   <- ================HOX2a_HOX2a <---------LBD16--------->TOE2(3)   <---------LBD16====================== -----ZmHOX2a(1)     ------>ZmHOX2a(1)   <---------GLK1(2)------>MYB83       <---------ARR14(2)   --- -DOF2    <------ZmHOX2a(2) <-----------RAV1(1) --------------->AtSPL3       --------->ARR14(2)  ----   aggaagcctgcgatccagtgttcctcatctctgcgggtgcaccgattcttaacgtacacccacttccccaggtttccaagatcccttcttcttcttcatc  16234300                                                 <---------------AGL15     ------>ZmHOX2a(1)                           <----------DOF2     <---------YAB1 ====HOX2a_HOX2a                                 --------------->AGL15 ===========HOX2a_HOX2a                 <-------MYC3        <---------ARR14(2)  ------>ZmHOX2a(2) ====HOX2a_HOX2a                      <---------TOE1(2)     --------->GLK1(2)  <------ZmHOX2a(2) --------ICU4                ------------>CBF   <-----------------AGL1--------->YAB1 ===========HOX2a_HOX2a ------------>CBF------->MYC3       --------->WOX13(1) --------->ARR14(2) --->ZmHOX2a(1)     ------>ZmHOX2a(1) <---------TOE2(2)  ------------>CBF     <---------ARR14(2) ----->TOE2(3)  <---------PCF2       <---------ALFIN1  --------->ANAC46  --------->MYB52(1)   ctaattcctacaagtctgggtcctgtctcaattcaattcccacgtttttgactttaaacggcaatctggttttgataacggatcgtgttctatcttggtc  16234400                        <----------DOF2                     ------->TEIL                   ----------->HVH21                   --------->LBD16                   <---------SPL7                  --------->DEAR3(1)                 <---------LBD16                           <---------DOF5.7(2)               --------->ANAC46                           <---------WRKY12                 --------->YAB1              ------>ZmHOX2a(1)                           <---------WRKY38(1)            ------>MYB83          --------->GLK1(2)                              --------->DOF5.7(2)             ------>MYB46(1)          --------->ARR14(2)               <----------DOF2<---------WRKY45          <-----------GT1          <---------ARR14(2)      <<<<<<<<<TBF1       ---------->ID1             <---------ICU4   aaaatcatggagattcctcgccggacctttgttttcttcttctctctttgtctcttgtcgtcaacgtctctctccatcgataattttcaccaagcgtaag  16234500                                                            <-----------GT1                                                <---------WOX13(1)                                             <---------YAB1 --------->YAB1                          <                                <---------GLK1(2)          <---------YAB1                           -                                <---------ARR14(2)       --------->YAB1   ---------->DOF2   <--------       <<<<<<<<<TBF1            --------->ARR14(2)       <---------ICU4<----------DOF2    <---------YAB1   tctaatttcttcttctcttcttgccattccctcagatttgtattcttctaattggcaaattatcacaatttggctttaaagtcttgatttttatctttgt  16234600                                                                                      --------->ATHB12              --------->SPL7                                                         <---------AHL20(2)          <---------------AtSPL8                                             ------>ZmHOX2a(2)          <---------------AtSPL3                          --------->ANAC46  <---------At4g35610        --------->YAB1                       ----------->GT1               --------->ARR14(2) ---------HSFB2a(2)                <---------ICU4       --------->ANAC46   <---------AGP1  ---------- -------->HSFB2a(2)------->TEIL   --------->ICU4  <---------AHL20(2)       ------->TEIL <---------WOX13(1) --DOF2<---------YAB1        <---------REM1(1)    --------->AHL20(2)       <---------ARR14(2)   ttctggactattatagtaccgcatcttgtagttgtagtaatggcaatgggaaataaatacacaacattgtagcaatggatctgatatttgattgaaagac  16234700                                                                                              -------                                                                                           --------->ANAC46                                                                                           --------->ANAC58                                                                                           --------->ANAC58                                                                                    --------->MYB52(2)                             <---------ATHB12                                       ----------->GT1                          --------->TOE1(2)                                         <---------MYB46(3)                          --------->TOE2(2)                                    <---------TOE2(3)                        --------->GLK1(2)                                      <---------TOE2(2) >DOF2        --------->ETT(2)  ------->TEIL                  <-------GAMYB    <---------TOE1(2)   <-   aggttttttgtttttgtctacatgagaacctatgaatcttcttgataatgtattgtctattgccagttgtttctcaagtcttaggtttgttataagccac  16234800                                                                          <---------WOX13(1)                                                                        --------->ATHB12                                                                       --------->ICU4                                                                    ------>ZmHOX2a(1)           <-----------ARR10                      --------->At4g35610  <---------YAB1    <---------ANAC58                       <-----------HVH21      ----------->RAV1(2)    <---------ANAC58                      ------>ZmHOX2a(1)    <---------At4g35610                 <- ---->RAV1(1)  <-----------GT1          <---------ANAC58       --------->At4g35610      <---------ANAC46 ----------RAV1(1)                      <---------ANAC58   --------->MYB52(1)        <---------YAB1<-   attgttgctagagaatgttaccactgtataccagtagcaatttcctgtcatcaactgtagcaaacagctcctgatgattgatcagttgtgatgggcaaac  16234900  Previous    Next  AGI:  At2g38830.1    Description:  tumor susceptibility protein-related. similar to ATELC-LIKE/ELC-LIKE, small conjugating protein ligase [Arabidopsis thaliana] (TAIR:AT5G13860.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83353.1); contains InterPro domain Tumour susceptibility gene 101; (InterPro:IPR008883); contains InterPro domain Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135) Range:  from: 16232855    to: 16233950    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g38840.1    Description:  guanylate-binding family protein. similar to GTP binding / GTPase [Arabidopsis thaliana] (TAIR:AT5G46070.1); similar to guanylate-binding family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF99346.1); similar to putative guanylate binding protein [Oryza sativa (japonica cultivar-group)] (GB:AAP44686.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22621.1); contains InterPro domain Guanylate-binding protein, N-terminal; (InterPro:IPR015894); contains InterPro domain Guanylate-binding protein-like, C-terminal; (InterPro:IPR015900) Range:  from: 16234407    to: 16239534    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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