Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  --------->YAB1                             --------->YAB1                      <---------ATHB12                               <------ZmHOX2a(2)                  <---------MYB52(1)                               <------ZmHOX2a(1)                 --------->TOE2(3)                               <---------TOE1(2)        <-----------GT1--------->YAB1                           <---------LBD16------>NtERF2      <--     --------->MYB52(2)<---------ICU4                           <-----------RAV1(2)               ---   gcaagattagttaccttctcgttaatcataagaatcatagacataacatgctcgaacgtagcagtctcaggatcaaaattcggccatagatagttctcca  16217000                                                                                                    <                                                                                                    -                                                                                                  ---                              --------->ZAT14                          <-----------HVH21         ----                              <---------ZAT14                         --------->bZIP60(2)       <----              --------->LBD16----------->HVH21                    --------->At4g35610         -------             --------->HSFC1(1)                              --------->TOE2(3)               --------             <---------HSFB2a(2)                             --------->TOE1(3)        ------>ZmHOX2a(1)             --------->HSFB2a(2)<---------ANAC46          <-----------GT1  <---------ANAC55(2)------- -------ARR14(2)   --------->YAB1                  --------->ZAT6 <---------At4g35610 =============== ------>ARR14(2)   <---------ICU4 --------->ALFIN1 --------->AtMYB61  --------->ANAC46===============   aatactgactcacttccagaatcataactcgctgaagtggaacaggtttacgaccactagttaccttaagctccgtcacataaatctccttcacaacctc  16217100    --------->MYB52(1)   <---------SPL7  ------>ZmHOX2a(2) <------ZmHOX2a(2) ---------ARR14(2) -------->ARR14(2) ------>LBD16                                                        ------>MYB46(1) ----->HSFB2a(2)                                                <---------DOF5.7(2)                <- -----LBD16                               <---------At4g35610 <---------MYB52(1)<---------GLK1(1)  <- -->AtMYB61             -------->P        <---------ZAT2      --------->DOF5.7(2)        --------->DAG2 ->MYB46(3)   <---------LBD16    --------->TOE2(3)           --------->TOE1(3) --------->ARR14(2)  <- >GAMYB  --------->ARR14(2)      --------->YAB1  ------>ZmHOX2a(1)   ------>MYB83       ---------->DOF2 ========HOX2a_HOX2a<---------At4g35610   --------->At4g35610--------->TOE2(3) ------->TEIL        -- =======HOX2a_HOX2a --------->At4g35610   --------->ZAT2<----------DOF2       <---------GLK1(2)<-----   cggatcgaacggtttctcagggagcttacctccagtcttaatccagctctcctcagcgattttcgttaacctatcttgctgaatctccgataaagtgatg  16217200                                                                                    <---------DEAR3(1)                                                                             <---------ALFIN1       -                       --------->WRKY38(1)                                 ------>NtERF2          <--              --------->CCA1(2)                                            --------->LBD16      -----              <------ZmHOX2a(2)                                           --------->ANAC58      <----             --------->AGP1                           <------MYB46(1)     --------->ANAC58      <----           --------->MYB59--------->ZAT6      <------ZmHOX2a(1)           --------->ANAC46<----------DOF2    <------NtERF2      --------->WRKY45   <---------At4g35610            <---------LBD16 <-------GAMYB --------GLK1(1)<-----------RAV1(2)       --------->ZAT2            --------->ARR14(2) <---------ANAC46 --------At4g35610   <----------DOF2      --------->At4g35610    <---------ATHB12   --------->ALFIN1< --------ZAT2--------->ARR14(2)           <---------ZAT2    >>>>>>>>>>>>>>>>>LFY  <-----------RAV1(1) ------->ZAT2--------->ARR11(3)   <---------HSFC1(2)  <------MYB83  <---------GLK1(2)  <---------ANAC58 ----REM1(1) <---------ARR14(2)   --------->HSFC1(2) --------->MYB59<---------ARR14(2) <---------ANAC58   gagctcggcaaattagatccaggctttgactctagaggcttctcagcaggatggctaggtaactccaatggatactccgccactctgtggcgcttgaagt  16217300                                          <---------HSFC1(2) <---------ANAC58                         --------->HSFC1(2) <---------ANAC58                    --------->ANAC58 --------->ANAC55(2)                 --------->ANAC58 -------->SPL7                       --------->ANAC46 -------SPL7     --------->ARR11(3)--------->ANAC46                               --------->MYB52(1) ---------->AtSPL3                 --------->ANAC58                             <---------MYB52(2) -----------AtSPL8              ----------->HVH21                              <---------At4g35610 -----------AtSPL3     <-----------TGA1---------->DOF2      ----------->GT1 ---------->DOF2  <-------TEIL ---------TOE1(2)<---------ARR11(3)--------->ANAC58       <---------ZAT14   <-------TEIL <-----------   cgtacgtgccagttccatagaccttcgtcattctctcacgcgaaagcttcttgctcagagagaagtgaaatcaacacatacagcaaacgaagaggttcag  16217400                                                                                   <---------MYB46(3)                                                                                   <---------DEAR3(2)                                                                                ------------>AtMYB77                                                                           --------->CCA1(2)  ------>MYB46(1)                                                                         --------->YAB1     ---------                                                                   <-----------HVH21<-------GAMYB----                                                                  <---------O2  ------------>MYB.PH3(1)                           <---------RVE1(1)                      --------->bZIP60(1)      --------->DEAR3(2)                          <---------ARR11(3)    --------->ALFIN1  --------->bZIP60(2)<---------MYB52(1)                          --------->ARR11(3) <---------DEAR3(1)   <---------bZIP60(1)--------->ARR14(2)                          <---------GLK1(2)  <---------AtMYB61    --------->O2 --------->DAG2 ------>MYB83                *TSS----------->GT1      <---------At4g35610    ------>NtERF2---------->DOF2------->GAMYB          <---------ZAT6----------->ARR10<---------LBD16       --------->DEAR3(1) <---------DEAR3(1) ----AtSPL8  <---------ZAT14         <----------DOF2    <-------TEIL  ---------->DOF2<---------ARR14(2)   agaagggatttagagtgaagaagagtaagatttttagggcttaagcggaggtgagagtttcatcgacgacgtcaaagataaaaggcggttacgaccgact  16217500                              --------->ZAT2                              --------->At4g35610                              ----------->RAV1(2)  <---------ETT(1)            <---------ZAT2  ----------->HVH21        <---------At5g28300 --------->DEAR3(2)       <-----------GT1    --------->ARR14(2)                                  ---- --------->MYB46(3)   --------->AHL20(2)     <---------ARR14(2)                            --------->TOE1(3) >DREB2C(2)           <---------AHL20(2)    <---------RAP2.6(3)                            --------->YAB1 ------->HVH21<---------YAB1  <---------At4g35610                      <---------ZAT14     --------->TOE2(3)   cgacccgacccgagtgatgctagtttaattacagctggacttgggccgatattgggctagaagtattttagtctggactggaactagaaataatcttaag  16217600                   <---------ICU4                   --------->YAB1                   --------->MYB52(1)                  <---------AHL20(2)                  <---------ATHB51               --------->AHL20(2)              <---------AHL20(2)          <---------AHL20(2)          --------->AHL20(2)                                                                       <-       <---------YAB1                --------->ANAC58                                           -----      --------->AHL20(2)             --------->ANAC58                              --------->TOE2(3)     <---------AHL20(2)         --------->ANAC58                           --------->AHL20(2)   <----     --------->AHL20(2)       ---------->DOF2                           --------->ATHB12   --------->At5g28300    --------->AHL20(2)     --------->At4g35610 <-----------ARR10       --------->ICU4     ----------- ------->GT1  --------->AHL20(2)--------->ANAC58                       <---------YAB1--------->AHL20(2)   agtaaaattaatataaataaataatggtgagcaaaagccaagtaaaccgaatcgaaccaaaactgaatttcttatgattaaaaaacattaaacagtaatt  16217700             ------>MYB46(1)             ------>MYB83           <---------MYB59    ------>MYB83    ------>MYB46(1)                                             <---------AHL20(2)  <---------MYB59                                               --------->AHL20(2) ----------GT1                                              <----------DOF2            --------->AHL20(2) ---------->AtSPL8                                   <-----------GT1              --------->AHL20(2) -----------AtSPL8      ------>MYB46(1)            <----------DOF2          <---------YAB1      ----- >GT1   <-----------GT1 ------>MYB83        --------->TOE2(3)  --------->AHL20(2)<---------AHL20(2)   tgtaccaaataaaccaaactaaaaccaaatttatgcaatcggataacataaaactttacattcttttaaattagtattttgatttaaaataaaacaactt  16217800                                                              ------------>CBF                                                         <------------CBF                                                        --------->ATHB51                                                        --------->ATHB12                                                        <---------ICU4                                                       <---------YAB1                   <---------AHL20(2)                  --------->ICU4                   --------->AHL20(1)                --------->YAB1--------->TOE2(3)       <---------ZAT18                              <---------ATHB12       --------->ZAT18                       <---------ARR14(2)    >>>>>>>>>RAP2.2  <---------YAB1   --------->AHL20(2)        --------->ARR14(2) --------->WOX13(1)             ------ ---->AHL20(2)    --------->AHL20(2)    --------->MYB52(1)<---------WOX13(1)     <-----------GT1   aaatatgagtgtgcataaaaaaaaattgaactgagccaaaataaacgaattcgaatcataattgatcaatctaaaccgaatataaaccgaataaaacgaa  16217900  Previous    Next  AGI:  At2g38770.1    Description:  EMB2765 (EMBRYO DEFECTIVE 2765). similar to LBA1/UPF1 (LOW-LEVEL BETA-AMYLASE 1), RNA helicase [Arabidopsis thaliana] (TAIR:AT5G47010.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67620.1); similar to putative aquarius [Oryza sativa (japonica cultivar-group)] (GB:AAT78813.1); similar to hypothetical protein OsI_011509 [Oryza sativa (indica cultivar-group)] (GB:EAY90276.1); contains domain SSF52540 (SSF52540); contains domain G3DSA:3.40.50.300 (G3DSA:3.40.50.300); contains domain PTHR10887:SF5 (PTHR10887:SF5); contains domain PTHR10887 (PTHR10887) Range:  from: 16210041    to: 16217416    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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