Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              <---------ANAC58                                            <---------AtLEC2                                            <---------ANAC58                                  ------>NtERF2                               <---------ATERF1(1)                               ------>NtERF2<---------ANAC46                               <---------DDF1--------------->AGL15                              --------->At1g77200                              --------->DEAR4(1)                              <---------ETT(1)                              --------->DREB2C(2)                              ----------->HVH21                              --------->ANAC46        <---------ZAT14       --------->RAP2.3(3)              <---------At4g35610                ---     ----------->GT1          --------->DEAR3(1)               --------->At4g35610              ----- ---->ALFIN1        <-----------GT1    <-----------RAV1(1)   <-----------RAV1(2)      --------->ANAC58 ->DOF2 --------->ZAT14      --------->RAP2.3(1)            --------->LBD16           --------->ANAC58   gtcgaaacagtaaacagccatttctctgttcgccgacaccattgttgcttggaagagaaaaccgcagatgaaaaaaatccaaatcagcaagtaatgtgaa  16193900                                                                          <---------MYB52(2)                     <---------YAB1                                  --------->ANAC46              --------->TOE2(3)                                      --------->ANAC58             <--            --------->GLK1(2)                            <---------MYB59 --------->At4g35610      ---            --------->ARR11(3) --------->CCA1(2)        --------->At4g35610                     -----            <---------ARR11(3)<---------ARR11(3)        <---------At4g35610------->GAMYB    ------>MYB83            <-----------ARR10 --------->ARR11(3)     --------->LBD16 --------->ANAC58       ------>MYB46(1) ------>TOE1(3)   <---------YAB1             --------->ZAT6        ---------->DOF2        <---------MYB59 -->TEIL--------->TOE2(3) ---------->DOF2  <-----------GT1       --------->YAB1    --------->AHL20(2)   cctgaaataaccaaaatcttattatgcttaaagataccaatttttaaacactacccagagctaactatcaaaagcaactcacaaatcaaataccaaattg  16194000                                                <---------WRKY38(1)                                     ---------->DOF2                                   <---------AHL20(2)                                     ---------->DOF2                                  --------->AHL20(2)                                    --------->AHL20(2)                           ----------->GT1      <---------ETT(2)                        <---------AHL20(2)                       --------->AHL20(2)       --------->ETT(2)                        --------->YAB1 -------------AGL15    <---------AHL20(2)       <---------WRKY12                   <---------ATHB12 ------------>AGL15 --------->AHL20(2)          <---------DEAR3(1) <---------MYB52(1)--------->WOX13(1) ---->ZAT18         <---------AHL20(2)      <---------AtMYB61   ------>ZmHOX2a(2)--------->GLK1(1)   cacaaattagcaatagcagtattaaaaaattgaaaatttaaaagtgatggtcgacgatgaaattgatctgttttgtatgagggaaatcaattaaaagcta  16194100                                                       <------ZmHOX2a(1)                                                     --------->ANAC58                                                     --------->ANAC58                        --------                                                     <---------TOE2(3)                      ---------                   ------>ZmHOX2a(2)               --------->CCA1(2)                ----------->GT1--        --------->DAG2                           --------->CCA1(2)                --------->At4g35610      ---------->DOF2  ------>ZmHOX2a(2)    ---------->DOF2      <---------YAB1   <---------At4g35610   tggaatctaaaaggttatggatcgatctgtaagaagaattgaaaccaaaagagataaggaatcaattctgagtatgaagaagagagcggagaaaacctga  16194200                                                                                                    <                                                                                                    <                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                           <---------AHL20(2)                                                                                          <---------AHL20(2)                                                                                          --------->AHL20(2)                                                                                          <---------AHL20(1)     --------->DAG2                                   ---------->DOF2                ------------>CBF    ---------->DOF2      --------->At4g35610       --------->YAB1                ----------->GT1  <-- ->TOE2(2)<-----------RAV1(2)                      *TSS    <----------DOF2     <---------ZAT14    <-- -->RAV1(2)  <------ZmHOX2a(1)                 <---------AHL20(2)              --------->ZAT14   <--- -------->DOF2        <------ZmHOX2a(1)        --------->AHL20(2)           <---------ANAC46    <----   gtaaagaaaagcgcaggagagagaggaagatgaagtgtctacgttttgtttaattagaaagctttgttgtttgattttgagtatagtgacaatttttttg  16194300                                                           <---------At4g35610  <---------ANAC58                                         <---------ZAT2  <---------ANAC58                                         --------->ZAT2  <---------ANAC46                                       <------NtERF2 ------MYB46(1)                                         <------NtERF2 ------MYB83                                            <---------At4g35610 --------DEAR3(1)                                       --------->At4g35610 --------AtMYB61                                       --------->RAP2.6(2) ------->MYB111(2)                                     <---------ATERF1(1) ------->MYB46(2)                                  <---------RAP2.6(2)                            --- ------->MYB111(1)                                --------->RAP2.6(3)                             <-- --------MYB46(3)                                 <---------At5g28300                        <------NtERF2 ------->MYB55(2)                                <-----------GT1                            ------>NtERF2 -------MYB55(1)                              ----------->ARR10                        <-------TEIL ------P<----------DOF2                       --------->MYB52(2)                  --------->AHL20(2) ----GAMYB                                --------->At4g35610              <-----------GT1 --------->DEAR3(1) -----MYB46(3)  ---------->DOF2           <---------At4g35610            <-----------GT1--------->ANAC46   gttggtgtgtctttttctcaaagacttgttaactaaactatttgagcttagttacggccgcagctagtttttgtttttctccatatatatacgtcgccct  16194400              <---------GLK1(2)              <---------ARR11(3)              --------->ARR11(3)                                          <-----------GT1          ---------->DOF2                                                <-----------GT1     <-------TEIL<---------AHL20(2)                                      <---------AHL20(2)   --------->ARR14(2)         ----------->GT1                   <---------AHL20(2)   <---------GLK1(2)        ---------->DOF2 ---------->DOF2  <---------ARR11(3)          <---------ICU4 ------>STY1(2)<---------CCA1(1)       ----------->GT1       --------->AHL20(1)         --------->ICU4 -------STY1(2)<---------RVE1(1)    ---------->DOF2          <---------AHL20(1)      <---------YAB1   agctagattcacaaaagatttttttttttcaaaagtaaaaaagattaaaagttatcgattcaatatataatctatttaacttattttgtcattactacat  16194500            <---------ATHB51                                                --------->CCA1(2)            <---------AHL20(2)            --------->ANAC58                 --------->ARR11(3)         <---------AHL20(2)               --------->ANAC58                 <---------ARR11(3)         --------->AHL20(1)          <----------ID1                      --------->ANAC58         --------->AHL20(2)     <---------AHL20(2)                       --------->ANAC58          --        <---------AHL20(2)     <---------AHL20(2)                 ---------->DOF2          --------->YAB1        --------->AHL20(2)     --------->AHL20(2)     <---------SPL7<----------ID1--------->YAB1   <-   aatagaaaaattaaattattcgatataaactaattttataagacaagaattttggtcttaccgaaaaaaaaagacaagatataaacatatttatcaaaac  16194600                                   <----------DOF2                                <-----------GT1                               <-----------GT1               ----------->GT1<---------AHL20(2)     <---------YAB1      --------->ARR11(3)                                                        --   ----------->GT1       <---------ARR11(3)        <--------P                                      <- ------->ARR14(2)      ----------->GT1  ------>ZmHOX2a(1)                                          -- --------ARR14(2)    ---------->DOF2   --------->TOE2(3)                             <----------DOF2   atatatggttatagtatttgttaaaaagataatttatctttcctaaaaactaggttagtaatcgtctaattttgtttagacggtttactttacataaaaa  16194700                                        <---------ICU4                               --------->YAB1                               <---------ICU4                            --------->YAB1                          --------->AHL20(2)                                 --------->AHL20(2)                       --------->AHL20(2)  <-----------GT1    --------->ANAC58                ------->GAMYB --------->ICU4                  --------->ANAC58             <---------AHL20(2) ------->AHL20(2)   --------->YAB1<-----------GT1           ---------->DOF2  <---------AHL20(2)<----- --------AHL20(2) ------>MYB46(1) --------->YAB1    <<<<<<<<<<WRKY63----------->GT1       <---------YAB1 ------->AHL20(1) ------>MYB83<---------YAB1      ----------->GT1---------->DOF2  --------->YAB1   ataaaatgcaatatacaaccaaatataaaataataataacaatttttacatatagtcaaatgcaaagcaaaggaaaattttaaataagaatttttattta  16194800  Previous    Next  AGI:  At2g38710.1    Description:  AMMECR1 family. Identical to Uncharacterized protein At2g38710 [Arabidopsis Thaliana] (GB:Q9ZVJ2); similar to unknown [Populus trichocarpa] (GB:ABK92765.1); contains InterPro domain AMMECR1 (InterPro:IPR002733) Range:  from: 16191447    to: 16194251    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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