Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              ----------->GT1           ----------->GT1          <---------LBD16   --------->YAB1                                                                        <-------TEIL >ZmHOX2a(1)--------->LBD16              --------->YAB1                         ------>MYB83 ---------AGL15                        ------>MYB83                             ------>MYB46(1) -------->AGL15                        ------>MYB46(1)                        <---------MYB46(2) --------->AG                         ----------->RAV1(1)                     <---------MYB59  <----- --------->AGL2                     --------->MYB46(3)                       <---------ANAC55(2) --------->AGL1          --------->TOE2(3)                    --------->YAB1 --------->ANAC55(2)   tactagcatgaaaccggaaaaaaacaacatcaacaaaaaccaacaatactcaaatgcttataaatcacaacaatacattacctaatccaagttcatttca  16190600                                                                                                    <                                                                                             --------                                                                                            ---------                                                                                ---------->DOF2  ----                                                                              <------ZmHOX2a(2)  ----                   <---------TOE1(3)                                          =================HOX2a_HOX2a       --------->AHL20(2)                                      ----------->RAV1(1)      <------ZmHOX2a(1)       <---------AHL20(2)<---------YAB1           <---------ANAC58       ======================HOX2a_HOX2a ------GT1    ------->TEIL                        <---------ANAC58       ------>ZmHOX2a(2) ----------   caattcaatttatatgaatctaagcttatgagaaaatgaagagcaagtagtaccttgccattgagccacattcgatctcgatcaaaggaaggactaacag  16190700                                                               --------->HSFC1(2)                                                               <---------HSFC1(2)                                                   --------------->AGL15     <---------CCA1(2)    <---------MYB46(3)                             --------->YAB1      --------->SPL7   --------->ALFIN1                                <--------HAHB4--------->GLK1(2)   <---------DEAR3(1)                  --------->ANAC58        <---------HSFB2a(1)   <---------AtMYB61                   --------->ANAC58        --------->HSFB2a(1) ---------DEAR3(1)                  ----------->TGA1--------->TOE2(3)  ------->TEIL -->DOF2     --------->ZAT14        ----------->HVH21<---------YAB1   --------->ARR14(2) >MYB52(1)   <---------ZAT14      <---------ANAC58<---------ATHB12 --------------->AtSPL3     <------ ----->DEAR3(1)                   <---------ANAC58<---------YAB1 <---------ARR14(2)     --------->LBD16 ------->HVH21               <------ZmHOX2a(2)    --------->ICU4 --------->ARR14(2)<----------DOF2  < ->HVH21   <---------ZAT14 <------ZmHOX2a(1)      ----------------->AGL3 --------->TOE2(3)    -------   cgacggtggtgagagtacagaggtgatcaggatcaagcgtgacgctaatgctatcattaatgggaagaatccgaacctcatctctctttccccaatactt  16190800                             <------NtERF2                            ------>NtERF2                            <---------ATERF1(1)                            <-----------HVH21                            <-----------TGA1                           --------->bZIP60(2)                           --------->ATERF1(2)                           <---------ATERF1(2)                           --------->bZIP60(1)                           --------->RRTF1(2)                           --------->RAP2.3(2)                           --------->DEAR3(1)                           --------->RRTF1(3)                           --------->O2                           --------->RAP2.3(3)                           <---------bZIP60(1)                          --------->ERF1                          --------->ORA47(2)           ------>NtERF2                          <------NtERF2--------->DEAR3(1)                          --------->RAP2.3(1)         --------->ANAC58                          --------->RRTF1(1)          --------->DEAR3(1)                         ------>NtERF2--------->MYB46(3)           <---------At4g35610       ------>ZmHOX2a(2)                         <---------RAP2.3(1)          --------->ANAC46                      ---------                         <---------ATERF1(1)          --------->ANAC58                      <------ZmHOX2a(2)                        --------->ANAC46 ------>MYB83<---------LBD16                       <---------ARR11(3)            <---------MYB46(3)   --------->AtMYB61  <---------ATERF1(1)                    --------->AGP1 <---------LBD16       <---------At4g35610          ------>ZmHOX2a(1)      <----------DOF2 --------->ARR11(3) <---------At5g28300   --------->ATERF1(1)   <---------CCA1(2)     <---------ZAT2          <---------ARR14(2) ---ANAC55(2)         <---------ATERF1(1)------>MYB46(1)           --------->At4g35610     --------->ARR14(2) ---------ICU4       <---------DEAR3(1)--------->AtMYB61           --------->ZAT2         <---------GLK1(1) -->ANAC55(2)       --------->ATERF1(1)<---------ALFIN1--------->LBD16     <---------DAG2 --------->GLK1(1)   aatcacggcgatattcgttggagtctgcgccgtcaccatcaccacccatttctcctccgccattaacacagctcaagctttttcgatttcagagatctgt  16190900                                                                                                    -                                                                                 ----------->GT1    <                                                                               <---------------------WRI1                                                 ---------->DOF2            --------->ALFIN1    =====             <-------TEIL                  <---------HSFB2a(1)            --------->At4g35610   <----     <---------HSFB2a(2)              <---------ANAC46                    --------->ZAT2     <------ZmHOX2a(1)     --------->HSFB2a(2)            --------->MYB52(1)          --------->At4g35610  --------->AHL20(2)  <----------DOF2                  ----------->TGA1             <---------At4g35610  <---------AHL20(2) >CCA1(2)   --------->CCA1(2)      ----------->HVH21   ---------->DOF2  <-----------RAV1(2)  ========   gtagctttgagaagattcaaatagaaatgaaatggaagtgacggagagttcgaaagagaaagaaacagctcaaatcaggtgggagattaaaataaggagg  16191000                                     <-------MYC4                                     ------->PIF4                                     <-------MYC3                                     <-------PIF4                                     ------->MYC3                                     ------->PIF5                                     <-------MYC2                                     ------->MYC2                                     <-------PIF5                                 --------->ZAT18           --------->SPL7        --------->ZAT14    --------->ATHB12    *TSS     <---------ZAT18                --------->AHL20(2)               ----   <---------YAB1      <---------ANAC58                <---------GLK1(2)                         ----  ------>ZmHOX2a(2)    <---------ANAC46              <---------YAB1                              ---- -------->ARR11(3) <---------At4g35610               --------->ICU4--------->AHL20(2)        <------- ---------ARR11(3) --------->At4g35610  <---------ANAC58  --------->TOE2(3)<----------ID1  <--------- ========HOX2a_HOX2a   <---------ANAC58 <---------ANAC58<---------YAB1    <---------------------WRI1< --ZmHOX2a(1)      <-------GAMYB <---------ZAT14  <-------TEIL  <---------AHL20(2)  --------->YAB1 <- ========HOX2a_HOX2a<---------MYB52(1) <-------TEIL--------->YAB1  <---------AHL20(2)    --------->AHL20(2)   atgatctcattggtacgattcagttgcgtccaaactgcacatgcgtaagcgattcatgattcttaattttttaatatgcgaaaaaatcaaaataaacacc  16191100                              <---------ZAT18                                              --------->ZAT18                              <---------ZAT14                                              <---------ZAT18                              --------->REM1(2)                                            <---------ZAT14                              --------->ZAT18                                              --------->ZAT14                              --------->ZAT14                                  --------->ANAC46   <----------DOF2          --------------->AtSPL8                             --------->ANAC58    <- ----->ANAC58              <---------ANAC58   --------->TOE1(3)                --------->ANAC55(2) -- ----->ANAC58              <---------ANAC46   --------->TOE2(3)       <---------ARR11(3)   --------->REM1(2) ----->ANAC46     --------->ANAC58            --------->YAB1          --------->ARR11(3) ------------ --ALFIN1         --------->ANAC46    <---------AHL20(2)              <---------AHL20(1)<---------ANAC58 --GT1--------->AHL20(2)   <---------ANAC58<-----------GT1         --------->AHL20(2)   <---------ANAC46 ---------ALFIN1  --------->ANAC55(2) --------->AHL20(2)       <----------DOF2 --------->ANAC58<----- --------ALFIN1   --------->ANAC58<---------ZAT6     <-----------GT1  --------->AHL20(1)<---------ANAC58   cccaacttttaaatattcttacgaaataagcgtgtactcttaaattaaccataaataacctccaacttttaaaatattcttacgaaataagcgtgtactc  16191200                                                    --------->REM1(2)                                                    <---------ZAT14          --------->MYB46(3)                                                    --------->ZAT18        <-----------GT1                                                    --------->ZAT14     --------->ANAC58                                        --------->ANAC58                --------->ANAC58       --------->YAB1                   --------->ANAC46    --------->AHL20(2)       --------->TOE1(3)                --------->ANAC55(2) <---------AHL20(2)       --------->TOE2(3)       --------->AHL20(1)   <---------ZAT18 --------->YAB1              <----    <-----------GT1            <---------ARR11(3) --------------->AtSPL8--------->ANAC55(2) --------- --------AHL20(2)              <---------AHL20(1)<---------ANAC58   --------->TOE2(3)       --------- ------->AHL20(2)           --------->AHL20(2)   <---------ANAC46   --------->TOE1(3)     <---------At4g35610 --->AtSPL8             <----------DOF2 --------->ANAC58<---------ZAT6  --------->ANAC46  --------->At4g35610 ----ZAT6     <-----------GT1  --------->ARR11(3)<---------ANAC58<-----------GT1     <----------DOF2<   ttaaattaaccataaataacctccaacttttaaaatattcttacgaaataagcgtgtactcttaaattaaccataagtaacctccaactttgagttgact  16191300                                                     <<<<<<<<<<WRKY43                                                     <<<<<<<<<<WRKY38                                                   <------MYB83                                                  <---------AtMYB61                           <---------ZAT14        <---------MYB46(3)                           --------->ZAT14       <---------MYB55(1)                    <---------ZAT6               <--------P               <---------ANAC58             --------->MYB52(1) ------DOF2 --------->WRKY38(1)        <-------TEIL----------->GT1 >WRKY38(1) --------->WRKY12          <--------P <---------MYB52(1)                      --------->ANAC55(2) >WRKY12  --------->At4g35610       ----------->GT1<------MYB46(1)                       ----------->RAV1(2) -----------GT1<---------ANAC58    <---------TOE2(3) <<<<<<<<<<WRKY26   --------->ZAT6 <-----------GT1   tttaacaaaaacagttgacttggtgttactgtagtatgaggttgataaacggttggtcaatttggacattgtcaacactaagttcaagtttacctgatac  16191400                                                                             ----------->GT1                                                                             --------->YAB1                                                                         <---------YAB1                                                                       <-----------GT1                                                                 --------->AHL20(2)                                                                 <---------AHL20(2)                                    ---------->DOF2          --------->AHL20(2)                                <------ZmHOX2a(1)            <---------AHL20(2)                            --------->ALFIN1        ---------->DOF2<---------TOE2(3)                        <------ZmHOX2a(1)       >>>>>>>>>NAM--------->AHL20(2)      --------->MYB46(3)   gattttaacatcgagtctaattaagaggaagtgaggaacaaagagagaagggatgaaagtgatttaattaatgttacaatagtgaaacagccaagttcga  16191500  Previous    Next  AGI:  At2g38700.1    Description:  MVD1 (mevalonate diphosphate decarboxylase 1). similar to mevalonate diphosphate decarboxylase, putative [Arabidopsis thaliana] (TAIR:AT3G54250.1); similar to diphosphomevelonate decarboxylase [Hevea brasiliensis] (GB:BAF98285.1); similar to mevalonate disphosphate decarboxylase [Hevea brasiliensis] (GB:AAL18927.1); contains InterPro domain Ribosomal protein S5 domain 2-type fold (InterPro:IPR014721); contains InterPro domain GHMP kinase, C-terminal (InterPro:IPR013750); contains InterPro domain Diphosphomevalonate decarboxylase; (InterPro:IPR005935); contains InterPro domain GHMP kinase; (InterPro:IPR006204) Range:  from: 16187774    to: 16191024    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g38710.1    Description:  AMMECR1 family. Identical to Uncharacterized protein At2g38710 [Arabidopsis Thaliana] (GB:Q9ZVJ2); similar to unknown [Populus trichocarpa] (GB:ABK92765.1); contains InterPro domain AMMECR1 (InterPro:IPR002733) Range:  from: 16191447    to: 16194251    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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