Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         <-------TEIL         <------NtERF2                                                                     --------->ARR14(2)    ------>NtERF2                                                                     <---------GLK1(2)    <---------ANAC58                                                                  ------>ZmHOX2a(2)       <---------ANAC58                         --------->ATHB12                        <------ZmHOX2a(2)        <---------ANAC46                        --------->ICU4                          --------->ARR14(2)       <------NtERF2                        <---------YAB1                          <---------ARR14(2)       --------->ATERF1(1)                      ---------->DOF2                          --------->GLK1(1)        <---------ATERF1(1) ->LBD16           ----------->GT1                             <---------GLK1(1)        <---------DEAR4(2) --LBD16          --------->ALFIN1                            ----------->ARR10        <---------DEAR3(1) -LBD16     <------ZmHOX2a(1)                             <---------LBD16        <-----------RAV1(2) -ANAC46 <------ZmHOX2a(1)                            <----------DOF2<---------ARR14(2)--------->ALFIN1   aagtgaagagaggaggagaagtggtaaagattgggttttgaggggagagttttctgcgtttggggagatcggattcgtcggaaacaggggaggcgcgttt  16184600                                                               ============================bZIP_DOF                                                               <---------TGA1a                                                               <---------ANAC46                                                             <---------ZAT14                                 <---------YAB1          <---------AtMYB61                               --------->YAB1            <---------DEAR3(1)                    <---------ANAC46                     --------->ALFIN1                    <---------DEAR3(1)               --------->SPL7                           <------NtERF2                   --------->At4g35610              <---------SPL1(1)                <------ZmHOX2a(2)                   <---------LBD16--------->ATHB12  --------->SPL1(1)               <---------ARR11(3)                 <---------DEAR3(1)                <---------SPL7                   --------->ARR11(3)                <---------At4g35610              <---------------AtSPL3    =================HOX2a_HOX2a      ----------->GT1--------->LBD16            <------------------SPL14   <------ZmHOX2a(1)<--------     <------ZmHOX2a(1)<------NtERF2      <------ZmHOX2a(1)<---------MYB46(3)    ---------->DOF2   caatggaggagtgatttcatcggcggagaacaaggatgatggaggagagtagtcgtacggtggtgaagtgagacggaggagagaaagatcaatgtcgtcg  16184700                                                                                                  <--                                                                                          --------->AHL20(2)                                                                                          <--------ATHB1                                                                                          <---------ICU4                                         --------->YAB1                                   --------->ATHB51                                        <---------YAB1                                    --------->YAB1                                      --------->YAB1                                     <---------ATHB12                          --------->ARR11(3)                                             <---------ATHB51                          <---------ARR11(3)                                         ------------>CBF                          <---------ARR14(2)                                      <---------WOX13(1)                          --------->ARR14(2)                 <---------ANAC58    <------------CBF --- -ANAC46     <-----------GT1  <<<<<<<<<TBF1                  <---------ANAC58  <---------YAB1    <---   aggctgagattgttgttacgctcttgaagttcttcttccattatcatcttcttaagtcttcttgcttccttccttccttctctgattgtcaataatttct  16184800                                                                                           ----------                                                                                          <---------ANAC46                                                                                          <---------ANAC58                                                                                          <---------ANAC58                                                                                          <---------RAP2.6(2)                                                                                         <---------LBD16     ----------->GT1                                                            --------->LBD16 -------HSFB2a(2)                                      <-----------TBP        <---------LBD16       < ------>HSFB2a(2)                                  ----------->GT1          --------->GLK1(2)       - ------LBD16            --------->GLK1(2)        ---------->DOF2           <---------GLK1(2) <-------   ctggaaaacgaaaataagtttgagagaatgtgaagaaagacttggaagttgaaaagtatatatagactcggtttaaagattccggttcaattgcggttta  16184900                                                                                   <---------ICU4                                                                                 <------------CBF                                                                               <---------YAB1                <----------DOF2                                                --------->ICU4                <---------DAG2      <---------AHL20(2)                         <---------ATHB51       --------->AHL20(1)           --------->AHL20(2)                    ------>NtERF2   <---------AHL20(2)               --------->AHL20(1)                    --------->LBD16  --------->AHL20(2) <---------AHL20(2)          ------------>CBF        <---------DEAR3(1) ->GT1 <---------AHL20(1)          <---------AHL20(2)                   <---------LBD16      ------>ZmHOX2a(1) ---------ARR11(3)  --------->AHL20(2)    <-----------GT1           --------->AtMYB61   <---------bZIP60(1) -------->ARR11(3)  <---------AHL20(2)  --------->AHL20(2)         --------->MYB46(3)   --------->bZIP60(1) ---DOF2     <-----------GT1       --------->AHL20(2)            <-----------GT1<---------ICU4   <---   aagatttaatattttttactttttaaattttgtcaaattaaattaaaccggttcaatttcggtttaaaaaccactccggcgataattgtgacatcctaac  16185000                                      <---------ALFIN1                                     --------->SPL7                                     --------->MYB46(3)                                    --------->ATERF1(1)                                    <------NtERF2                                   ------>NtERF2                                   <---------SPL7                                  <---------ANAC46                                  --------->DEAR3(1)                                 --------->ATERF1(1)                                 <------NtERF2                                 --------->RAP2.3(1)                                <---------RAP2.3(1)                                --------->LBD16                               <---------DEAR3(1)                               --------->DEAR3(1)                               --------->ATERF1(2)                              <------NtERF2                              --------->RAP2.3(1)                          <-----------HVH21                         --------->ALFIN1              <---------SPL7  <---------LBD16              --------->LBD16 --------->ATERF1(1)             --------->DEAR3(1)<---------ATERF1(2)            <---------LBD16  <---------ATERF1(1)                 <---------MYB52(1)           ------>NtERF2 <-----------RAV1(1)                    <---------DEAR3(2)           --------->ABI4(1) ------>NtERF2                     <---------ATERF1(2)          --------->DEAR3(1) <---------RAP2.3(1)               --------->ATERF1(2)         --------->MYB46(3) <---------DEAR3(1)                <------NtERF2                       ---        <---------At5g28300 --------->ETT(2)                 --------->LBD16                    -----       <-----------GT1 <---------ANAC58                      ------>NtERF2                   ------->TEIL      <---------YAB1 <---------YAB1<---------ATERF1(1)      --------->ANAC46              --------->ANAC46    --------->YAB1 *TSS<---------ANAC58                    <---------LBD16                <---------MYB52(2)    <---------ICU4--------->ICU4------>NtERF2              --------->MYB46(3)             --------->ANAC58 ---------CBF--------->RAP2.6(2)<---------ATERF1(1)    ------>ZmHOX2a(1)                  --------->ANAC58   attgaattatcaccgccggactgatgagtgtcgccggcgtccaccgttttagtcttcctctcccgccggtactcttattttctcttgctctcacgaaccc  16185100                                                                             --------->ANAC58  <-----                                                                             --------->ANAC46 -------                                                                             --------->ANAC58 -------        <---------At4g35610                  --------->HSFB2a(2)        <---------ZAT18    --------->ZAT14        --------->At4g35610              <---------DAG2                <---------ANAC58    <---------ZAT18 <---------YAB1             <---------ZAT14  <---------HSFB2a(2) <----------DOF2           <---------ZAT14 -------->HVH21             <---------At4g35610     --------->ZAT14    <---------ANAC58    --------->ZAT18 ------>RAV1(2)<-----------GT1           <----------DOF2     --------->LBD16------>ZmHOX2a(1) -------   ctgatgtttgagctgaattactaatcttgctgctctgtttccacttttcagaagtgttctctccgtacttttagcgtcctcgccaatggcaagcgcactc  16185200                                                                                                    <                                                                                                  <XX                                                                                                  <--                                                                                     ------>ZmHOX2a(1)                                           ------>MYB83                              --------------->AGL15                                           ------>MYB46(1)                           <---------------AGL15         <---------ALFIN1                --------->DREB2C(2)                     <-----------GT1 <---    <---------At4g35610                  --------->DEAR3(1)                    <-----------GT1   <---    --------->At4g35610          ---------->DOF2                           <----------DOF2       <--- ----ATHB12            --------->LBD16  --------->DEAR3(2)             <------MYB83 <---------------- -->ANAC58           <---------LBD16<-----------HVH21                  <------MYB46(1)        <------ -->ANAC58 --------->bZIP60(2)  ------->GAMYB                         <---------AtMYB61     --------- -->ANAC46 --------->ANAC46    --------->MYB46(3)<-----------GT1   <-----------RAV1(1)      <--------   aatctctgctaccacatcacttctccgtattcaaccaaagtcaccgacttgttacctccttgagtcacaatgttggtcttttttctcctcttaatggttg  16185300   <---------WOX13(1) --------->ATHB12 ---------YAB1 XXXXXXXXXXXXXXXXXXMIR832-3P --------DOF2 ------ANAC46 ------ANAC58 ------ANAC58                                                       <---------ANAC58 -AGL3                                                              <---------ANAC58                - --P                                                      <----------DOF2 <----------DOF2 <---------TOE2(2) >ATHB12                  <---------MYB52(1)   <---------ZAT18     ------->TEIL           <---------TOE2(3) -MYB46(3)       ------>ZmHOX2a(1)             --------->ZAT18 --------------->AtSPL8     <---------TOE1(2)   ctttgattgagaattggtcctgtgatcagtttgttttgaattagaaatgtgctcttacctctttatctgtacttgtctttcacatcaattcttaggtttc  16185400                                    <---------TOE2(3)                      <---------ANAC58                                                ------>ZmHOX2a(1)       --------->At4g35610  ------>ZmHOX2a(1)                          ----------->HVH21   --------->ARR14(2) <---------ANAC58                           ------>ZmHOX2a(1)   --------->TOE1(3)   --------->GLK1(2)  <---------HSFB2a(1)                      <---------ZAT18       --------->TOE2(3)   <---------ARR14(2) --------->HSFB2a(1)                      --------->ZAT18       <---------ANAC55(2) -------->MYB46(3) <------NtERF2 <---------REM1(1)       <----------DOF2       <-------TEIL         <   caacaaatctgatgcagaggcagagcgttcctgtgatgaaggtatacctatttcaacttctttagtcctctagttgacacattcattccttaacttgaga  16185500  Previous    Next  AGI:  At2g38690.1    Description:  unknown protein Range:  from: 16183554    to: 16184741    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g38695.1    Description:  transcription factor. similar to unnamed protein product [Vitis vinifera] (GB:CAO18013.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16642.1); contains InterPro domain Helix-turn-helix, Fis-type; (InterPro:IPR002197) Range:  from: 16185019    to: 16187481    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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