Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           <---------MYB52(1)                        <-----------HVH21                   --------->HSFB2a(1)            --------->ANAC58                   --------->ZAT2                 --------->ANAC58 ------>ZmHOX2a(2)                   --------->At4g35610        --------->ANAC58    <------ZmHOX2a(2)                   <---------HSFB2a(1)        --------->ANAC58   --------->ARR14(2)                   <---------HSFC1(2)         --------->ANAC46   <---------ARR14(2)                   --------->HSFC1(2) <---------At4g35610  <---------ZAT14                  --------- ----------DOF2   ----------->ARR10   --------->At4g35610  --------->ZAT14               --------->AHL20(2)   agcttttgatgttcagcgagaagctccgtcaagtactgagagctgttcaagcaagaaacagaacacagatcggttttcacataaaaccaaaataaaaaga  16156600                                     <---------LBD16                                   ------>ZmHOX2a(2)                               <---------ETT(2)                          <-----------RAV1(2)                   <------ZmHOX2a(1) <-----------RAV1(2)          --------->ZAT2                   <----------ID1  ==============================HOX2a_HOX2a                   =======================HOX2a_HOX2a             <---------ZAT2  ----------->GT1  --------->HSFB2a(2) <---------MYB52(2)                          --------->At4g35610  <---------At4g35610  <---------HSFB2a(2) --------->MYB46(3)<------ZmHOX2a(1)         <---------At4g35610  --------->At4g35610 ->DOF2  --------->YAB1        --------->ETT(2)           <------ZmHOX2a(1) <------ZmHOX2a(1)   gtgtctcgaaatcagagtttaggaacaaacctgtcgatctcaggagtgcttctaatctgaggagaagcagctcgagcaggagagaagtaagatgagttat  16156700                                   <<<<<<<<<TBF1                        <---------ANAC58    <<<<<<<<<TBF1        <---------GLK1(2)                        <---------ANAC58 <<<<<<<<<TBF1         <---------YAB1       <---------YAB1          <---------TGA1a     <----------DOF2       <---------ZAT14         --------->DAG2         --          ===============================bZIP_DOF --------------->AtSPL8   ---------->DOF2         <-   <-----------GT1    <---------ANAC46<<<<<<<<<TBF1 --------->ZAT14<---------MYB46(3)      <---------GLK1(1)   tgtataaaccagacatgggttattttgtgtgcctttcttcttcttcttcttctctgtacaaaaccaagattgttgggaaaagggttttgatggaaatcgc  16156800                                            --------->At4g35610                                            --------->ZAT2                                            <---------At4g35610                                         <---------At4g35610                                         --------->At4g35610                                         <---------ZAT2                                         <------NtERF2                                        ----------->RAV1(1)                                        ------>NtERF2                                       <-----------RAV1(2)                                       ================RAV                                     ------->GAMYB                                    --------->ANAC58                              <----------DOF2                                    --------->ANAC46                       ------>NtERF2               ---------->DOF2     ------>MYB83                           --------->ANAC58          ------------------------>ANAC81--------->ZAT2 ----------->GT1   --------->ANAC58          ----------->GT1          ------>MYB46(1) --------->ANAC58       --------->ANAC46         --------->DAG2           --------->MYB52(1)  ------>MYB83<---------At4g35610       <--------        ---------->DOF2          --------->AtMYB61 --------->ANAC58  --------->At4g35610  ---------->ID1 ------->ARR14(2)          ---------->DOF2 ----------->RAV1(1)    --------->At4g35610<--------------- --------ARR14(2)    ---------->DOF2--------->ANAC58  ------>MYB46(1)<---------At4g35610 <-----------GT1   agaaccaaaaaaaagtagaaagagaaagagaaagaccaacgccagcagcagacaccaaatgtgaattctgcagaagacgccagactttttttttcttttt  16156900                                                                           <---------AHL20(2)                                                                --------->DAG2       <-----------RAV1(2)                                                     <---------AHL20(2)<---------RVE1(1)              --------->RVE1(1)                     <---------YAB1    <---------ARR11(3)             --------->GLK1(2)---------->ID1       <---------AHL20(2) --------->ARR11(3)  -----------             --------->ARR11(3)                    *TSS     --------->TOE2(3)  <---------AHL20(2) --DOF2      <---------ARR11(3)           ---------->DOF2<-----------GT1   --------->AHL20(2) ---------ANAC81  <----------DOF2 <----------DOF2<---------YAB1---------->DOF2 --------->AHL20(2)   ttcttctgtctgaaaaatctctttttttttttgtttctttgattaaaagttatttttattttccataaaggagatttttaattaaactcaggcagaaaaa  16157000                              ------>ZmHOX2a(2)                             <---------GLK1(1)                             --------->GLK1(1)                                                  -----                            --------->ARR11(3)                                        <-----------HVH21                            --------->ARR14(2)                                        <-----------TGA1                 ----------->HVH21                                                   --------->ANAC46             ---------->DOF2<---------AGP1                                          <------------AtMYB77        ----------->GT1     <---------ARR14(2)                     <---------AHL20(2)------->GAMYB<-- <---------At4g35610        <---------ARR11(3)                   <---------YAB1     --------->MYB46(3) --------->At4g35610       <---------CCA1(2)   ----------->GT1--------->ICU4--------->ICU4     <----- >GT1 ---------->DOF2    --------->ALFIN1  <---------TOE2(3)  <---------YAB1<---------YAB1   <-------   atcagctaaaaagtttaaagtgacagagtggatctctctgttacaaaggttgaaaaatttagtgattattttttggtgataattcaaccgtcaccgtttg  16157100                                                                <---------AtLEC2                     --------->AHL20(2)                         <---------ANAC58               ------                    --------->AHL20(2)                          <---------ANAC58               <-----                    <---------------AGL15                   <---------ANAC58      <---------ARR11(1)                 <---------AHL20(2)                         <---------ANAC58      <---------ARR11(3)                <---------AHL20(2)                        <---------ANAC58        <---------ARR14(2)             --------->YAB1                               <---------ANAC58        --------->ARR14(2)            <---------YAB1                                <---------ANAC46        ------->TEIL ------           <---------AHL20(1)                             --------->ALFIN1       <---------ARR14(1)           --------->AHL20(2)                           <---------ANAC58         <---------CCA1(2)          --------->YAB1    <------ZmHOX2a(1)           <---------ANAC46   --------->WRKY38(1)------- <---------GLK1(2)  <---------AHL20(2)                  <---------ANAC58   --------->WRKY12  -------- ---->ATHB12--------->ICU4 ----------->GT1            <---------ANAC58     --------->ETT(2)--------->ANAC46 -------WOX13(1)--------->AHL20(2)                    <---------ANAC58  <---------ANAC46 <-----------GT1 ----YAB1<---------YAB1   <---------TOE2(3)        ----------------------->TaNAC69(2)================ --MYB52(1)<---------AHL20(2)                      <----------DOF2----------->HVH21  <----------DOF2   attgattctgtattataattaaataaataaggaaataagaaaatggagagaaactttggtgtgtgtgcgtgactacgtagaccgtatcttttaacgccgc  16157200                                                                               <---------TOE2(3)                                                                              <-----------GT1                                                                            <---------YAB1                                                                          --------->YAB1                                                                          -------->HAHB4                                                                          -------->ATHB1                                                                          --------->ATHB51                    --------->AtLEC2                                      <---------AHL20(2)                    --------->ANAC58                                      <---------ICU4          -------->ABF1                                                   <--------HAHB4          ------->MYC3                                                   --------->ICU4          <-------MYC2                                                   <---------ATHB51          <-------MYC4                                                   <---------YAB1          ------->MYC4                                                 --------->YAB1          ------->MYC2                                                 <---------ICU4          <-------MYC3                                                --------->AHL20(2)         --------->ANAC46                                             <---------AHL20(2)         --------->TGA1a                                             <---------YAB1         =============================================bZIP_DOF     <--------HAHB4         <---------ANAC55(2)                                       -------->ATHB1         --------->O2                                              --------->ATHB51         <---------O2                                              -------->HAHB4         --------->ANAC55(2)                                       <---------ICU4      <---------REM1(2)                           <---------ANAC58 --------->YAB1 --->At4g35610      --------->ANAC58              <---------ANAC58 <---------AHL20(2) ----At4g35610   <---------ATHB12                 <---------ANAC46<---------YAB1 >NtERF2 <---------TGA1a                   <----------DOF2        --------->ICU4--------->ZAT6 -->RAP2.6(2)  --------->WOX13(1)    --------->At4g35610          <---------ATHB51 ->RAP2.3(1)<-----------HVH21        <---------At4g35610       --------->AHL20(2)           <-------- ==================bZIP_DOF          --------->ZAT2            <---------AHL20(2)           ---------   taaaactttacacgtgtcaaccatgcaatcgctcatttgagctgtctttttggcctggacattttttaattattaattattaacaataaatgtgtttctg  16157300                  <---------YAB1                  --------->ICU4            --------->ALFIN1          <------MYB83         --------->MYB46(2)         --------->MYB111(2)                                                                    -----         --------->MYB55(2)                                                                   <------         --------->MYB52(2)                                                        <-----------GT1         <---------AtMYB61                                                 --------->ANAC46  <-------         --------->MYB111(1)        <---------YAB1                         --------->ANAC58  <-------         --------->MYB59     <---------ZAT14                               --------->ANAC58  <-------        <---------MYB55(1)   <---------ZAT18                            XXXXXXXXXXXXXXXXXXXX>MIR2939       <<<<<<<<<MYB98        --------->ZAT18                            <---------ZAT18      --------       <---------MYB52(1)    --------->ZAT14                            ------->GAMYB        <------- <---------AHL20(2)     <---------YAB1                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) --------->AHL20(2) --------->ARR11(3) <---------YAB1        --------->LBD16     --------->AHL20(2) -ARR14(2)<---------ANAC46<---------ANAC58             --------->ANAC46--------->ANAC58      <------- >ARR14(2)<------MYB46(1) <---------ANAC58     <---------ARR11(3)      --------->ANAC58    <---------   caattttttgttaggtggtgatgattttgagtgctcttattatgctcatggtcttccaagtcccccaaatgtaacgcacacaattaaaccattttacgtg  16157400                                                          ---------->DOF2     --------->AHL20(2)                                 <---------AHL20(2)  <---------GLK1(2)                                  --------->YAB1 ---->REM1(2)                  <---------AHL20(1)  <---------YAB1 ---------AtSPL8               --------->AHL20(1)  <---------AHL20(2)                               x --ANAC55(2)           <---------AHL20(2)          --------->AHL20(2)                               < --ANAC55(1)           --------->AHL20(2)       <---------AHL20(1)   <---------TOE2(3)             <x --ANAC58        --------->ANAC58               --------->AHL20(1)--------->AHL20(2)              --- ->ANAC55(2)     --------->ANAC58  <---------HSFB2a(2)  --------->AHL20(2)                    ------>ZmHOX2a(1) --ANAC46      ---------->DOF2 --------->ARR11(3) --------->TOE2(3)<---------AHL20(2)        <xxxxxxx --ANAC58  <----------ID1    ------->TEIL    --------->AHL20(2)   <---------AHL20(2)       ---------- --GT1<---------AHL20(2)  <---------YAB1 ----------->GT1--------->YAB1                 <----------DOF2   tacagaattttataagacaaagcaatttatgaatattttggaagagaaaaaatattaataaaaaggaatttaatgaaaaaaactctcaactttgtcctga  16157500  Previous    Next  AGI:  At2g38610.1    Description:  KH domain-containing protein. similar to KH domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G08620.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45373.1); contains InterPro domain K Homology; (InterPro:IPR004087) Range:  from: 16154191    to: 16156951    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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