Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      ---------->DOF2                                                                  --------->LBD16                                                                 --------->ANAC46                                                                 --------->ANAC55(1)                                                                 --------->ANAC55(2)      ------>MYB83                                         --------->ETT(2)     ------->TEIL                ------>MYB46(1)                                         --------->WRKY38(1)  <---------ARR14(2)          -------->P                                      <---------ANAC46        --------->ARR14(2)  <---------ICU4                                 ------>ZmHOX2a(2)        <---------HSFB2a(2)  <---------ICU4                            <-------TEIL<------NtERF2     --------->HSFB2a(2) <------ZmHOX2a(2)                           --------->ARR14(1)           ------>ZmHOX2a(1)    <---------ARR11(3)                           --------->CCA1(2)            =============================HOX2a_HOX2a                          <---------ARR14(2)        <---------ARR14(2)       --------->ARR11(3)                          <---------GLK1(2)    <---------ANAC58  --------->ANAC58<---------YAB1                          --------->ARR11(1)   <---------ANAC46  --------->ANAC58--------->ICU4              <---------ANAC58   ==============================HOX2a_HOX2a  <---------At4g35610              <---------ANAC58 --------->ARR11(3)   --------->ARR14(2)--------->ICU4    <---------MYB111(1) --YAB1--------->MYB46(3) --------->ARR14(2)   <---------ANAC58  <---------ANAC55(2) <-----------GT1   tgtatactaacaacttgcttagcaacaagattcgatcttgtcgtcgactgcttgaatcctcgcgaacccgtaatgctcagatcattatcacctactagtc  16145200                                                                                              -------                                                                                            ---------                 --------->ANAC46                                                           <--------                --------->LBD16         ----------->RAV1(1)                               --------->MYB52(1)         <---------DAG2                 <---------ALFIN1                                  -----------         <----------DOF2         --------->ZAT6                                        --------->ANAC46      <-----------GT1      --------->ZAT6                 <---------ARR11(3)           --------->ANAC58     <---------ATHB12     --------->ZAT14          <---------ZAT18               --------->ARR11(3)   ------>MYB83<-----------RAV1(2)   --------->ANAC46    --------->REM1(1)       <---------ARR11(3)   ------>MYB46(1)        <---------ZAT14          --------->ZAT18--------->ATHB12     --------->ANAC58   gaaccaaatcactttctccaggtaattctacactatcactccccacagtttgatgcactacatcttcttcattagatagtgaagaactcaagcaacagat  16145300                                                                    --------->ANAC58       <---------ARR14(2) -->At4g35610                                                       --------->ANAC58       --------->ARR14(2) >MYB46(3)                             ---------->DOF2            ---------->DOF2     --------->At4g35610 ---RAV1(2)                         --------->LBD16         --------->WOX13(1)<------ZmHOX2a(1) >RAV1(1)   --------->ARR14(2)     --------->LBD16        <---------ATHB12  <---------TOE2(3)   <----   gaaattgtctctcggtttctctataaaactgaattgcccgagaaagggagagtttttcgaatcaatccaaaagcaattgaggattgaatgctgaatccgt  16145400                                      <---------ATHB12                                     ------>MYB46(1)                                     ------>MYB83                                <-----------GT1                           <---------ANAC58                   <-----------------AGL2         <---------ETT(2)  <---------ANAC58                                <---------At4g35610 -----MYB52(1)   --------->GLK1(2) --------->MYB46(3)                      --------->At4g35610  -----   ttgagcctccatcgacaagtttctgaattgggtttcaccaatcgagcattgagaactggaagagaacagaagaaggaagatgagcaattgcacatttcta  16145500                                                                                  --------->ANAC58                                                                                  --------->ANAC58                                                                       <------------CBF                                                                     --------->AHL20(1)                                                                     <---------AHL20(1)                                                                     --------->AHL20(2)                             --------->ANAC58                        <---------AHL20(2)                     <---------ANAC46  ----------->GT1              --------->AHL20(2)       ----------->TBP       --------->ANAC58        <----------DOF2<---------AHL20(2) ----->DOF2     --------->ZAT6   ---------->DOF2  ---------->ID1<---------YAB1    -------------------   aagaaccctacaaattcaactctacgtggacaaggaaaagatggttttttttgttctttctaaactcttattaaattgagagagaagccaaaaaaaaaaa  16145600                                                                  <---------DAG2                                                                  <----------DOF2                                                            <---------ATERF1(1)                                                            ------>NtERF2                          <-                        ------>NtERF2                      --------->DEAR3(1)                     <--            <------------CBF                            <---------DEAR3(1)                      <----            --------------------->WRI1                --------->ARR14(2)                        <----          <---------AHL20(2)               <-----------GT1 ----------->HVH21            <---------MYB52(1)         <---------AHL20(1)             <----------DOF2--------->SPL7           <----------DOF2 -----         --------->AHL20(2)          <------ZmHOX2a(1)<---------MYB52(1)     ---------->ID1    <-----         <---------AHL20(2)  ---------->DOF2<---------TOE2(3)  <---------ALFIN1 ------>ZmHOX2a(1)---- ----->ANAC81    <---------ZAT18 ---------->DOF2*TSS <---------SPL7      <---------MYB52(1)<---------   aaaactcttaataaaattgttcgctccgactaaaagaaaggactttaacatttcccgttcggcgaccactttctcgtttgtcctttctccgttttcccgt  16145700                               --------->ZAT6                               <-----------GT1                              <---------YAB1      <---------TOE2(3)     --------->YAB1                            --------->GLK1(1)   <----------CDC5     <---------ANAC58                               <---------CCA1(2)  ------>NtERF2        <---------ANAC46                           --------->ANAC46 --------RAP2.3(1)     <---------ANAC58                           --------->ANAC58 -------DEAR3(1)  --------->ANAC55(2)                             --------->ANAC55(2)    ============ -----MYB52(1)    <---------ANAC55(1)                             <---------ANAC55(2)    ============ -------HVH21     <---------ANAC55(2)                        <---------ICU4              ------>ZmHOX2a(1) ---->ARR14(2)    <---------ANAC46                     --------->TOE1(3)              =============== ----SPL7         <---------ANAC58 --------->ANAC58   --------->At4g35610             =============== ----->SPL7       <---------ANAC58 --------->ANAC58   <---------At4g35610             ------>ZmHOX2a(1) --GT1<---------TOE1(3)----------->GT1         ---------->DOF2    --------->ANAC58 ---------->ID1   <   tcggcgctaaggtttcgatttcgtgtcgtattatcactcgccttcatcgcaaagtaagcttaagaatcacgcatttctcttcttcgtcctcctattgttc  16145800           ----------->HVH21          ------>ZmHOX2a(2)         <------ZmHOX2a(2)         --------->CCA1(2)        <-----------ARR10        <---------AGP1        --------->ARR11(3)        <---------ARR11(3)        --------->ARR14(2)        --------->AGP1        <---------ARR14(2)       <---------CCA1(2)                                                                            -  --------->WOX13(1)      ---------->DOF2                                                           - ===============HOX2a_HOX2a                                                                         < ================HOX2a_HOX2a                                                                        < ===============HOX2a_HOX2a--------->DAG2        --------->DAG2                                    -- ================HOX2a_HOX2a                    ---------->DOF2                              <------- ---------ATHB12      <---------TOE2(3)<---------YAB1                                     <-------TEIL   aaatcattcagatctgacttcgttgagataaagtttggattttgatgagataaagtttggatttttgttttggggtttgaatcgataactgatacgttgg  16145900       <-----------RAV1(2)      <------ZmHOX2a(2) -------->ZAT2                                                             --------->REM1(2) -------->At4g35610                            ---------->DOF2    --------->YAB1 ---------At4g35610                        --------->ANAC58 --------->YAB1--------->ALFIN1     <----- ---------ZAT2                >>>>>>>>>TBF1--------->ANAC58--------->At4g35610               -------- ------->GLK1(2)    <----------ID1  ----------->GT1    <---------KAN4(2) <-------MYC3     <---------At4g35610 --MYB52(1)        ------------------------>ANAC81    --------->YAB1     ------->MYC3 <----------DOF2   gaagctggatcaggtatggaagacgacaagaagaagaagagaaacaagaaaaagaagaataagcagaataataaacgtgttgacgacgctttagcttctg  16146000                                                      <---------LBD16                                                      --------->At4g35610                                              <---------------AGL15                                              ------>ZmHOX2a(1)  <---------At4g35610           --------->LBD16                   --------->TOE2(3)   --------->At4g35610       --------->AtMYB61                  --------->ARR14(2)   --------->HSFB2a(2)  <---------ICU4    ------->GAMYB                         <---------ARR14(2)   <-----------RAV1(2)  --------->YAB1   --------->DEAR3(1)                   <---------ANAC58       <---------HSFB2a(2) <---------ATHB12   --------->MYB46(3)                   <---------bZIP60(2)   <-------TEIL       --------->WOX13(1)   <---------MYB52(2)                   <---------ANAC58   --------->GLK1(1)  --------->ANAC58  <---- ------RAV1(1)         --------->YAB1 <---------TGA2(2)   <---------AtMYB61   --------->ANAC58 ------ --->RAV1(2)     --------->YAB1      ----------->TGA1--------->MYB52(1)<---------At4g35610 <---------At4g35610   gtgcaacgacctccgtcgatgaaaatcatatcggagatggtgacgttcctcaaattagcggaggtccagatgccgatgagtcgcaatcatctcatcagat  16146100  Previous    Next  AGI:  At2g38570.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN71020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48883.1) Range:  from: 16143932    to: 16145495    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g38580.1    Description:  similar to hydrogen ion transmembrane transporter/ protein binding [Arabidopsis thaliana] (TAIR:AT1G65010.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18315.1); contains domain Spectrin repeat (SSF46966) Range:  from: 16145648    to: 16149666    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version