Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 <-----                                                                                              <------                                                                                              -------                                                                                              <------                                                                                              -------                                                                                            ---------                                                                                          --------->LBD16                                                             --------->ARR14(2)        ------>ZmHOX2a(1)                        <---------MYB52(1)                   <---------GLK1(2)        <---------ALFIN1             ----------->GT1                                 <---------ARR14(2)   --------->ZAT2             --------->LBD16                          --------->ANAC46            <---------ZAT2           <---------LBD16                            ----------->HVH21           --------->At4g35610       <---------ALFIN1--------->LBD16           ---------->DOF2                  <---------At4g35610 <---------ETT(1)    <---------LBD16           --------->LBD16                --------->AtMYB61------   tttccgacaacactccggtgaaacccggtgtctcttccctccaaaactccgaaaacccgacccgattccctcacaagagacctcagctcctccccagata  16125800                                                              --------->HSFB2a(1)                                                              <---------HSFB2a(1)                                                              --------->HSFC1(2)                                                             <-----------ARR10                                                             ------->TEIL                                                            ------>MYB83                                                      --------->MYB46(3)                                                     <------ZmHOX2a(2)                                                     ==========================HOX2a_HOX2a                                                    --------->ARR14(2)                                                    <---------ARR14(2)                                                 --------->MYB46(3)                                                ------>MYB46(1)                                                ------>MYB83------>MYB46(1)                                                -------->P<---------MYB52(2)                                               --------->MYB55(1)                                               --------->MYB52(1)                                              --------->AtMYB61                                              <---------ALFIN1<---------HSFC1(2)                                              --------->MYB46(3)                                              <---------MYB55(2)                                              <---------MYB111(2)                     --------->TOE1(3)   --------->YAB1                             <---------MYB46(2)                      --------->TOE2(3)  <---------YAB1                              <---------MYB111(1)                     <---------MYB59 <---------TOE1(2)      <---------ALFIN1      --------->DEAR3(1)        ------>ZmHOX2a(1) ----GLK1(1)       --------->ANAC58          --------->DEAR3(2)         <---------HSFB2a(2) ---ARR14(2)       --------->ANAC58          --------->MYB46(3)         --------->HSFB2a(2) -->ARR14(2)     ---------->DOF2          --------->ZAT18 <---------MYB46(2) ------>NtERF2 ---ARR11(3)  --------->ANAC46           ------>ZmHOX2a(2)--------->DEAR3(1)--------->ANAC58        - -->ARR11(3)  --------->ANAC58          <------ZmHOX2a(2) <---------MYB55(2)--------->ANAC46        - >LBD16       --------->ANAC58         <---------ARR14(2) --------->MYB46(3)--------->ANAC58       <- --->GLK1(1)  --------->ANAC55(1)    --------->DEAR3(1)  --------->ANAC46 <---------ATERF1(1) -------   tcccatgataactcacacgaaacgccccaaactctctcgccgatcgcaccaaccgatccaccgaaccttctctcctcgacgccaataacctaaaatcaat  16125900                       --------->ANAC58                       --------->RAP2.3(2)                <---------O2                --------->bZIP60(1)                <---------ANAC55(2)                <---------ANAC58                <---------ANAC46                <---------TGA1a                --------->O2                <---------ANAC58                --------->TGA1a                --------->ANAC55(2)                <---------ANAC55(1)                                  <---------ARR14(2)                <---------bZIP60(1)                                  --------->ARR14(2)             ----------->TGA1<---------GLK1(2)                <---------ZAT2           --------->At4g35610                                --------->ZAT2           <---------At4g35610                                <---------At4g35610         <-----------RAV1(2) --------->ARR14(2)               --------->At4g35610        <------ZmHOX2a(2)    <---------ARR14(2)           <-----------HVH21       <-----------HVH21--------->LBD16                  <---------ANAC58     <------NtERF2     --------->RAP2.6(2)          --------->LBD16 =====================HOX2a_HOX2a    ------>NtERF2      --------->RAP2.3(3)         --------->HSFB2a(2)    --------->LBD16    --------->ANAC58            <---------ANAC55(2)  --------->TOE2(3)   --------->LBD16    --------->RAP2.3(1)          <---------HSFB2a(2) ----------->RAV1(2)   ------>ZmHOX2a(2)  <---------LBD16    --------->At4g35610          <---------LBD16<-----------RAV1(2)       --------->ARR11(3) ------>NtERF2 ----------->STF1       --------->HSFB2a(2)<---------ANAC58                  <---------ARR11(3) -------->DEAR3(1)   <---------At4g35610        --------->GLK1(2)<---------LBD16          --------->YAB1 -------->ANAC46<---------bZIP60(2)   <---------HSFB2a(2)<---------ANAC46         ------>ZmHOX2a(2) - --------LBD16<---------TGA2(2) <-----------GT1 <---------ARR14(2)  ================================HOX2a_HOX2a -->WOX13(1) ----------->HVH21 <-------TEIL     --------->ARR14(2)  <------ZmHOX2a(1)    <---------ATHB12   ctccgccgggatcagatgacgtgagccgcaagattcacctccagaatgagattccggaagcgtgagctcaggaacctgaatcgatcgctcaatgatctcg  16126000                --------->ANAC58                --------->ANAC58                                                        --------->At4g35610               <---------At4g35610                                                      <---------At4g35610               --------->At4g35610                               <---------ANAC46       ----------->RAV1(2)               <------NtERF2                                   <---------MYB46(3)     <---------WRKY12            <------NtERF2                                  --------->ALFIN1          <-------TEIL           <-----------HVH21                               <---------AtMYB61    --------->ARR14(1)           ------>NtERF2                                  <------ZmHOX2a(1)    --------->ARR14(2)          --------->ATERF1(2)                  ----------->HVH21 --------->ALFIN1<-------TEIL          <---------ATERF1(2)               ------>ZmHOX2a(2) <---------AtMYB61--------->ARR11(1)   <-----------ARR10                        ==================HOX2a_HOX2a  --------->YAB1   --------->GLK1(2)                        =====================HOX2a_HOX2a ----------->ARR10   --------->ARR14(2)                     <---------ARR14(2)  --------->ALFIN1 <---------ARR14(2)   <---------ARR14(2)                     --------->ARR14(2)  <---------DEAR3(1)--------->CCA1(2)----  <---------GLK1(2)                <----------DOF2      --------->ALFIN1  <---------ATHB12     ------ ---------->ARR10            ----------->RAV1(2)       <------ZmHOX2a(1)--------->WOX13(1)------->GAMYB   gtgagaatctcgctggcagcgcaacgagagcctctggctctagggatcggagacggaggaggaggtggtggagtcaatgaagatacgttcaactggctcc  16126100                                                 <---------MYB46(3)                                                 <---------DEAR3(2)                                            <---------ANAC46                                            <---------LBD16        ------>NtERF2                                            <---------ANAC58     ------>ZmHOX2a(2)                                       --------->HSFB2a(1)     --------->ARR14(2)                                       <---------HSFB2a(1) <---------ICU4                                    --------->LBD16        --------->YAB1                                  ------>ZmHOX2a(2)       --------->ICU4                                 <------ZmHOX2a(2) <---------ARR14(2)           ----------->GT1             --------->ATHB12   <---------ARR14(2) --------->ARR14(2)--------->RAP2.3(3)     <-----------HVH21          --------->ARR14(2)<-------GAMYB<---------ARR14(2) -->ZmHOX2a(1)                 <------ZmHOX2a(1)<---------DEAR3(1)--------->DEAR3(1)  *TSS ----->RAV1(2)             ---------->DOF2  <---------ANAC58 <---------YAB1   ---------->DOF2   tggttcgcatcagagccattggagagagcgaaaggatccgaaggtttcgggcggttctaaattatgatccgccccaagaagaaagaaaaatcaacaagac  16126200                                                  <----------DOF2                                            <---------AHL20(2)                                     --                                            --------->AHL20(2)                                    <--                                           --------->AHL20(2)                                  <-----        <---------YAB1                  --------->AHL20(2)       --------->ALFIN1              <-----      <--------HAHB4                    <---------AHL20(2)    --------->DAG2                   ------      <---------ICU4               <---------AHL20(2)<---------MYB46(3) <-------TEIL        ------->TEIL     --------->ICU4       <-------GAMYB<---------AHL20(2)    ---------->DOF2         <---------YAB1<-   ttgttcgattattagaagaagcacatttcgttgttgttttatttatttaattctttggttagagaaagtgagggtccattactgattttgaatgtatata  16126300        ------->TEIL     <---------YAB1    --------->YAB1   --------->YAB1     <---------YAB1   <---------ICU4    <---------ARR11(3)                    --------->CCA1(2)   -------->HAHB4    --------->ARR11(3)                   <---------ARR11(3)  <---------ATHB12  --------->YAB1                        --------->ARR14(2)  --------->ICU4--------->ICU4                            <---------ARR14(2) <---------TOE2(3) --------->ICU4                         --------->ARR11(3) ------->AHL20(2)  <---------YAB1                        <---------HSFB2a(1) -------YAB1    <---------YAB1                      --------->ALFIN1           <---------At4g35610 ----YAB1 <---------AHL20(2)                    <---------At4g35610            --------->At4g35610 ----AHL20(2) --------->YAB1                    --------->At4g35610          <-----------RAV1(2) --->AHL20(2)<---------YAB1                 --------->ARR14(2)             <-----------HVH21 --------AHL20(2)--------->YAB1             <---------ARR14(2)     <---------YAB1   attaatgatgaatttatgatgatgatcatatggttctctaacttcatttccgctgtggaagatttgaatatgatttatgtcagatggaaaacgcgcttag  16126400                                               <---------AHL20(2)                                              <---------AHL20(1)                                              <---------AHL20(2)                       --------->ALFIN1 ----------->RAV1(1)                <----------DOF2       <---------PCF2             --------------->AGL15   ----------->TCP11(1)             <---------------AGL15   <---------PCF5            ----------------->AG <---------ANAC46            <-----------------AGL2   <---------TCP23            ----------------->AGL1 --------->ALFIN1--------->ATHB12              --------->AHL20(2)            <-----------------AG <-----------RAV1(1)            <---------HSFB2a(2)        --------->AHL20(2)      --------->ARR11(3)      --------->ICU4  --------->AHL20(2)<-----------RAV1(2)        <---------AHL20(2)      <---------ARR11(3)      <---------MYB52(1) <---------TOE2(3)               <---------AHL20(2) <     --------->YAB1    <---------ATERF1(1)    --------->AHL20(1)--------->HSFB2a(2)       <---------ATHB12   agagaaatgatattgccactttgggctgggccattatgtgggccacaatttaatgtttgaactggtccagatgtgtaatctttttaaatgcaattaatct  16126500                                                                         --------->MYB59                                                               --------->MYB52(2)                                                             <---------MYB52(1)                       --------->ATHB12              <----------DOF2     <---------TOE2(3)         <-             <----------DOF2                      <---------ARR11(3)     <---------TOE1(3)         <- <------ZmHOX2a(1)    <---------AHL20(2)          --------->ARR11(3)<---------YAB1                 -- ----------ID1        <---------YAB1         <---------YAB1<---------MYB46(3)           <---------TOE2(3)   caaggacaaatatagcttttgaatattattgagtaaacatttagtttataaatgtctttgtttgttagttatatttaggttattgagtttatggtataga  16126600                XXXXXXXXXXXXXXXXXXXX>MIR851-3P               <---------ANAC55(2)               --------->ANAC55(2)              ------------------------>ANAC81              --------->MYB59        <------ZmHOX2a(1)                                     <---------AHL20(2)       ----------->GT1                                     <---------AHL20(1) --------->AHL20(1)                                        --------->AHL20(2) <---------AHL20(1)                             <---------WOX13(1) <---------ICU4 --------ARR11(3)    ------->GAMYB            --------->ATHB12--------->AHL20(2)       <----------DOF2 --------AHL20(1)   --------->MYB46(3)       <---------YAB1--------->AHL20(1)      ------>NtERF2    - ------->ARR11(3) --------->MYB52(1)----------->GT1  <------ZmHOX2a(2)   <----------DOF2     <-------   atatatattaggaaaataggtaacagacaaaaacgaagtggaaacatgtgattggatcaaatattttaatacttacttttatggctgcccttttagtgat  16126700  Previous    Next  AGI:  At2g38500.1    Description:  similar to DTA4 (DOWNSTREAM TARGET OF AGL15-4) [Arabidopsis thaliana] (TAIR:AT1G79760.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD87077.1); contains domain SSF51197 (SSF51197) Range:  from: 16124473    to: 16126186    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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