Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 ======================                                                                               ======================                                                                              =======================                                                                              <------ZmHOX2a(2)                                                                             --------->ARR11(3)                                                         <---------ANAC58    --------->ARR14(3)                                                         <---------ANAC58    <---------ARR14(3)                                                    <----------DOF2          <---------AGP1  <-------                         <---------At4g35610       <---------DAG2            <---------ARR11(3)                       <---------ANAC58         <---------ALFIN1             <---------ARR14(2)                       <---------ANAC46        --------->MYB46(3)            --------->ARR14(2)  ----------->ARR10    <---------ANAC58        <-----------------AGL1        <-----------ARR10 ----->LBD16          <---------At4g35610      <-----------------AG         <---------CCA1(2)<------- -->NtERF2           --------->MYB55(2)     --------->ZAT18 --------->At4g35610------>ZmHOX2a(2) <--- -----RAP2.6(2)      <---------MYB46(3)   <---------At4g35610     ----------->TGA1      <-----------RAV1(1) ----LBD16          <--------P            --------->At4g35610     ----------->HVH21   <----------DOF2 ----GT1    ----------->HVH21            <-----------ARR10  <---------ZAT2 ----------->ARR10 <-------   ggctaagactctctgtgaaacggttgctggtgactcttgagaagagctcaccacctttggctagctccatgacgaagtagatcttcgtctttgtggcgag  16122000                                     <---------ANAC46                                    --------->RAP2.3(1)                                    --------->ATERF1(1)                                    <------NtERF2                                   <---------RAP2.3(1)                                   <---------ORA47(2)                                   <---------ERF1                                   <---------RAP2.6(1)                                   <---------ATERF1(1)                                   ------>NtERF2                                   <---------RRTF1(1)                                   <---------DEAR4(2)                                  <---------RAP2.3(2)                                  <---------RAP2.3(3)                                  <---------DEAR3(1)                                  <---------RRTF1(2)                                  <---------RAP2.6(2)                                  <---------RRTF1(3)                                 <------NtERF2                                 <---------ABI4(1)                        <-----------GT1                                 --------->ATERF1(1)                   <---------MYB52(1)                                <---------ATERF1(1)                   --------->At5g28300                                <---------RAP2.3(1)                   <-------GAMYB       --------->ALFIN1  ----------->HVH21      <---------CCA1(1)    <---------ANAC46 <---------LBD16         ----------->TGA1       <---------RVE1(1)    ----------->GT1 ===HOX2a_HOX2a        <------ZmHOX2a(1) ----------->HVH21      --------->ALFIN1 ===============HOX2a_HOX2a <---------ANAC46   <---------ARR11(3)--------->ZAT18 ===HOX2a_HOX2a      <---------TOE2(3)------>NtERF2            --------->TOE1(2)                    - --ANAC46        --------->CCA1(2)--------->ALFIN1            <---------ANAC58                     <- --ANAC58     --------->ANAC58 <---------DEAR3(1)             <---------ANAC58                  <---- ---ZmHOX2a(1)--------->ANAC58--------->ATERF1(1)  <-----------GT1  <------NtERF2               ----- --ANAC58<------ZmHOX2a(1)--------->MYB52(1)   --------->ARR11(3)--------->SPL7  <----------DOF2<----   gacttcggagaggagcacgatatgaggatgacggaggcggcgcatgacagatatttctctcttaacgtgcgccgttaaaccgtctttcaaacgttttttt  16122100                                      <---------ARR14(3)                                      --------->ARR14(3)                                      <---------GLK1(2)                                      <---------ARR14(2)                          --------->ABI4(1)                          ------>NtERF2<------ZmHOX2a(2)                         --------->RAP2.3(3)                                      <---------At4g35610                         --------->ANAC46                                       =====================HOX2a_HOX2a                         --------->RRTF1(3)                                     ====================HOX2a_HOX2a                         --------->RAP2.3(2)                                    <------ZmHOX2a(1)                         --------->DEAR3(1)                            --------->At4g35610                         <---------DEAR3(1)                            <---------At4g35610                        --------->RAP2.3(1)                           --------->DEAR3(1)           ------>ZmHOX2a(2)          --------->ARR14(2)              --------->RAP2.3(2)           --------->ANAC58   <---------MYB52(1)                      --------->RRTF1(3)           --------->ANAC58<------NtERF2------>ZmHOX2a(2)             --------->RAP2.3(3)     ------>ZmHOX2a(2)     --------------------->WRI1       <---------ARR11(3)             <------NtERF2--------->At4g35610     <----------DOF2    --------->ORA47(2)       <------MYB46(1)     --------->RRTF1(1)      -------- -------->SPL7          --------->ATERF1(1)      <------MYB83        --------->RAP2.3(1)     <------ZmHOX2a(2) ----------GT1          --------->ERF1--------->ARR11(3)            ------>NtERF2<-----------ARR10  < -----------AtSPL8      --------->DEAR4(2)    <---------MYB52(1)    <---------ATERF1(1)      <------- ---------->AtSPL8     <---------RAP2.3(1)------>ZmHOX2a(1)        --------->ANAC46         <-------- -----------AtSPL3 <----------DOF2  ----------->ARR10   <----------DOF2------>NtERF2        ---------   tgtacgactttgatcgcaacgctttcgccgccgttttgaagatcctccgcttggtagactttggcaaacgcgccgctaccgaggagcttaccgagatcgt  16122200                                                <---------WOX13(1)                                              <--------ATHB1                                              --------->ATHB12                                              <---------ICU4                                             --------->ICU4              ------>NtERF2             <---------DOF5.7(2)        ---------->DOF2        <---------At4g35610     ------>MYB46(1)           --------->At4g35610     ------>MYB83            <---------LBD16 <---------YAB1   <---------MYB59        --------->At4g35610<---------ATHB12  --------->HSFB2a(2)   --------->YAB1--------->DOF5.7(2) -------->P   <---------RAP2.6(3)----------->HVH21 --------->MYB52(1)    <---------YAB1--------->TOE2(3) ------->AtSPL3       <-----------GT1--------->TOE1(3) -----------GT1      --------->YAB1 <---------bZIP60(1) --------AtSPL3     <---------YAB1  <---------ANAC46 <---------LBD16 -ARR11(3)   --------->DEAR3(1)--------->LBD16-------->ATHB1                      --------->MYB46(3) >ARR11(3)   --------->RAP2.6(2) ----------->TGA1 --------->ATHB12        ------>NtERF2          ----   acttaccgaacaaagccgacttattatcatctccggtgacgttaacaatgattgattcggaagaattagagtcttcggccattaacaaacaaacaaaaaa  16122300                                                                                                -----                                                                                                -----                                                                                              >>>>>>>                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                               *TSS                         ---------                                                            ------>NtERF2                   ---------                                                         <---------ATERF1(1)                ---------                                                        <---------DEAR3(1)                  <--------                                                     --------->ZAT18                        ---------                                                    <---------ANAC58                        ---------                                                --------->CCA1(2)     <------------CBF      <--------                  <---------ZAT14          ---------->DOF2  --------->ABI4(2)    ------>ZmHOX2a(1)  -          --------->MYB52(1)           ----------->GT1  --------->ALFIN1        --------->TOE2(3)   - ----->MYB52(1)   ---------->DOF2  <------ZmHOX2a(1)<---------ANAC58<---------YAB1          ---------   aacagagcaaaaaaacagagtaaagagaaacagtctaggaattgtaaaagacatgcgcgcggtgcctcttcttattgaaattcctcaacttgccacgtaa  16122400 ---->ANAC58 ---->ANAC58 >>NAP -ANAC55(2) >ANAC46 >ANAC55(1) >ANAC58 >ANAC58 >ANAC55(2) -TGA1a                                            <-------TEIL >TGA1a <---------YAB1                        --------->AHL20(2)                --------->YAB1 >bZIP60(2)                                  ----------->TBP                    <---------ICU4 -O2   <---------AHL20(2)                 <---------YAB1             ---------->DOF2 -------->ANAC58         --------->AHL20(2)--------->YAB1       <---------AHL20(2) -------->ANAC58    --------->ARR11(3)<---------DAG2           --------->AHL20(2) >O2 <---------YAB1 <---------ARR11(3)<----------DOF2          <---------AHL20(2)      ---------->DOF2   gtaagctattattttaaacaaagattttaaaatagtttgactttattataaaatgcattaaacaaataaatgaaagaaacaatcttcacaaaagacaatt  16122500                                                                                              <------                                                                                             <-------                                                                                            <--------                                                                                        --------->AHL20(2)                                                                                        <---------AHL20(2)                                                                                        --------->AHL20(1)                                                                                       --------->ICU4                                                                                       --------->AHL20(2)                                                                                       <---------AHL20(2)                                                                                       <---------ATHB51                                                                                  --------->LBD16                                                       <-----------RAV1(2)        ------>ZmHOX2a(1)                                                     -------->P<---------ZAT6   ----------->RAV1(2)                        <-----------GT1             --------->WOX13(1)          <---------LBD16   tcaaaatgcgataacattttcgatttttactaatttgaattagttgcgatatatcaaccaggttagagatagagtcattttctcctgaaataatttacga  16122600                                                                          --------->MYB46(3)                                                                        --------->WOX13(1)                                                                       <---------WRKY38(1)                                                                       <---------WRKY12                                                                      --------->WRKY18(1)                                                                     <-----------HVH21                                                             <---------ANAC58                                                             <---------ANAC58              <---------GLK1(2)                         --------->At4g35610------->GAMYB     <---------KAN4(2)                                  <---------At4g35610--------->AtMYB61 --------->ANAC58                                   ------>MYB83    <---------At4g35610 --------->ANAC58                     <-----------RAV1(1)   ----------------->AGL1 --------->ANAC46     >>>>>>>>>>>>>>>>>LFY          ------>MYB46(1)>>>>>>>GRF7                 ------ ---YAB1    --------->ICU4         <-------TEIL   <---------MYB59  --------->MYB59           <------- --TOE2(3)  <---------YAB1      <---------MYB46(3)<---------MYB46(2)--------->At4g35610      -------- ---GT1   --------->YAB1     --------->ALFIN1  <-----------GT1  <-----------HVH21          <---------   ttcaaggaattttcatgattctttccccaatgtgtggttcatgttgttgttaccaaacatctgccttgtcaggtcaaccaaaaccttctaattccaggtg  16122700               --------->AHL20(2)               <---------AHL20(2)   ---------->DOF2                 ----------->GT1                                          <--------  <---------AHL20(2)          <------ZmHOX2a(1)                             --------->WRKY38(1) --->ALFIN1   <---------AHL20(2)--------->ZAT2                              --------->WRKY12<-------- --ZAT2       --------->AHL20(2)<---------ZAT2                       <-------TEIL    --------->AHL20(2) ->ZAT2       <---------AHL20(1)--------->At4g35610            <-----------GT1     --------->YAB1 --RAV1(2)    --------->AHL20(1)<---------At4g35610  <---------AHL20(2)    --------->DOF5.7(2)   ----   ggatttaaagtcttaatttatttgtttttgtaggagctgggaaaactcgacatattttttttttttaaacgttcatcgttgacaaaaataaaaactttat  16122800                                                                   <---------MYB52(1)                                                                 --------->bZIP60(1)                                                                <---------TOE2(3)                                                             <---------WOX13(1)                         --------->ARR11(3)                 >>>>>>>>>GATA-3                         <---------ARR11(3)                 >>>>>>>>>GATA-2   --------->AHL20(2)    --------->AHL20(1)                 >>>>>>>>>GATA-4 --------->YAB1          <---------AHL20(1)                 >>>>>>>>>GATA-1                       --- --DOF2               <---------AHL20(2)                ------->MYC3   <---------------AGL15      --- -DAG2---------->DOF2 --------->AHL20(2)               <---------ANAC46--------------->AGL15 <------- ----->YAB1         <---------AHL20(2)   ---------->DOF2<-------MYC3   <----------DOF2       --------   caaaaataaaaagaacgtctatataaaaatatttgaataatgtgaaagaaaaaaacaacgtggattgacgttactttgtatagaatgctaagcagtatac  16122900  Previous    Next  AGI:  At2g38490.1    Description:  CIPK22 (CBL-INTERACTING PROTEIN KINASE 22); kinase. similar to ATSR1 (SERINE/THREONINE PROTEIN KINASE 1), kinase [Arabidopsis thaliana] (TAIR:AT5G01820.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83248.1); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR0012 Range:  from: 16120569    to: 16122363    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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