Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                --------->ANAC58                                                                              --------->ANAC58                                   --------->ANAC58                     --------->ANAC58                                   --------->ANAC58                     --------->ANAC58                             --------->ARR14(2)                         --------->ANAC46            --------->YAB1   <---------ARR14(2)                         --------->ANAC55(2) -------->ICU4              <---------CCA1(2)                           <---------ANAC55(2) --------TOE2(3)          --------->ANAC55(2)                   ------>ZmHOX2a(2) --->GT1--------->ICU4    <---------ANAC55(2)                  <---------WOX13(1)   taatgttgaaataatcgaaatcgccaatacatatctgaagcaatataagaaatttcaaaactttgatcgatattacgcaaacccaatttcaaattccagt  16118500                                                                                   --------->ANAC58                                                                                   --------->ANAC58                                                                                   ------------------                                                                                 ---------->DOF2                    --------->ZAT14                                            <---------TOE2(3)                 --------------------->WRI1                               <---------ICU4                ------->TEIL                                              --------->ATHB51          --------->GLK1(1)                                               <--------HAHB4      --------->ANAC58                                                   <---------YAB1      --------->ANAC58                           --------->TOE2(3)       --------->ICU4    --------->MYB52(1)            --------->ATHB12             <---------YAB1  <---------YAB1       -   atcaaaaaacggaaatcgaacctgtactcttcgtagtcattgaagtttctaccgtaaccatgtttattagagaccataattaagaaagcaataagagaga  16118600                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                  <--                                                                                                  ---                                                                                                 ----                                                                                                 <---                                                                                                -----                                                                                                <----                                                                                                <----                                                                                                -----                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                              <------                                                                                             <------NtERF2                                                                                             --------                                                                                            <--------                                                                                            <--------                                                                                            ------>NtERF2                                                                                            <--------                                                                                           <---------DEAR3(1)                                                                                          <------NtERF2                                                                                          --------->ATERF1(1)                                                                                          --------->RAP2.3(1)                                                                                         --------->LBD16                                                                                         ------>NtERF2                                                                                         <---------ATERF1(1)                                                                                        <---------DEAR3(1)                                                                                        <---------ATERF1(2)                                                                                        --------->ATERF1(2)                                                                                        <---------RAP2.3(3)                                                                                       --------->ATERF1(1)                                                                                       <---------LBD16                                                                                   --------->At4g35610                                                                                   <---------At4g35610                               <----------DOF2                                   --------->HSFB2a(2)                          <---------At4g35610                                    <-----------RAV1(2)-                          --------->GLK1(1)--------->ARR14(2)                    <---------HSFB2a(2)-             ------>ZmHOX2a(1)<---------ANAC58                           --------->ETT(2)<---------RAP2.3(1)        <---------GLK1(2) <---------GLK1(1)<---------ARR14(2) --------------------->WRI1<---------RAP2.6(2) ------>ANAC81  --------->ANAC55(2)<----------DOF2 <----------DOF2       <---------DEAR3(1)<---------ANAC46 --------->DOF2 --------->YAB1<---------ANAC58 ------>ZmHOX2a(1)         --------->DEAR3(1)--------->DEAR3(1)   acaaaagacagattcctctcgtaatcggagatgctttctttatcaaatcctctcttttccatctctgagtaatcgtcgacgttccagatgccggcgtcgg  16118700                           <-----------HVH21                           <-----------TGA1                          --------->bZIP60(2)   --------->TGA1a        --------->ANAC58   <---------O2           --------->ANAC58   <---------TGA1a        --------->ANAC46   --------->O2           <---------TGA1a ------>NtERF2            --------->TGA1a ------->DEAR3(2)   --------->ARR14(2) ------->ATERF1(1)  <---------ARR14(2) -----NtERF2    --------->LBD16 -------ATERF1(1)   <---------GLK1(2) --->NtERF2     ------>NtERF2 ----->ARR14(2) <------NtERF2 ------ARR14(2) <---------At4g35610 ---->At4g35610--------->RAP2.3(2) --NtERF2      --------->DEAR3(1) -----At4g35610----------->RAV1(1) ---->ATERF1(1)--------->RRTF1(2) ----RAP2.3(1)--------->RAP2.3(1) ----DEAR3(2)------>NtERF2--------->O2                                       <------ZmHOX2a(2) >NtERF2     <---------ATERF1(1)                                             --------->GLK1(1) ----ATERF1(1)--------->RRTF1(1)                                            --------->ARR14(2) ---DEAR3(1) --------->LBD16                                                --------->ARR11(3) ->ATERF1(1) --------->At4g35610                                            <---------ARR11(3) -SPL7      --------->DEAR3(1)                                              <---------AGP1 -ATERF1(1) --------->ANAC46      --------->At4g35610         <-------TEIL  <---------ARR14(2) ---HVH21  <---------LBD16<---------O2                      <---------ARR14(2)              --------- -------->DEAR3(1) --------->HSFB2a(1)                      --------->ARR14(2)------>ZmHOX2a(2) ---------->HVH21<------NtERF2 <---------At4g35610      <---------LBD16<-----------GT1  <---------AtMYB61   ctccgacgtcttctccgccgcagattccacgtcagtagcttcaaccggtttcatgttatcgggattcgtcatattacagatctcaaaactttggtcggaa  16118800                                <------ZmHOX2a(1)                            <---------TOE1(1)                            <---------TOE2(1)                        <---------HSFB2a(2)                        --------->HSFB2a(2)                       <---------LBD16                      <-------TEIL                     --------->ARR14(1)                                               <---------TOE2(3)                     --------->CCA1(2)                                                <---------TOE1(3)                     --------->GLK1(2)                                        --------->ANAC55(2)                    --------->ARR11(1)                                        <---------ANAC55(2)                    --------->ARR14(2)                                        --------->ANAC46                    <---------ARR14(2)                                        --------->ANAC55(1)                    <---------GLK1(2)                                         --------->ANAC58                   <---------HSFC1(2)                                         --------->ANAC58                   <---------HSFB2a(1)                                     *TSS    --------->ICU4                   --------->HSFB2a(1)                        --------->ATHB12----------->GT1                   --------->HSFC1(2)                ----------->GT1   <---------HSFB2a(2)       <--- >ETT(1)          ----------->ARR10                ---------->DOF2     --------->HSFB2a(2)  <--------   ttggttctgtttttaatgcgaagattcgggacgaggaataacaaacttggaagaaaagaaaaactgattagttttggaaaacgtaattaaggtttcgagt  16118900                                <------NtERF2                               --------->LBD16                              <---------ANAC46                              <---------ANAC58                              <---------ANAC58                             --------->ATERF1(1)                             <---------LBD16                                                   ------                             <------NtERF2                                                     ------                           --------->ALFIN1             --------->ICU4                         <-----                        --------->ALFIN1               --------->ANAC58                 <---------ANAC46                       <-------MYC3              <---------WOX13(1)                   --------->ZAT14                       ------->MYC3             <------------CBF                      <---------ZAT14                      >>>>>>>>CAMTA3        --------->YAB1                  --------->ZAT6 <---------       <---------AHL20(2)  <---------DEAR3(1) <---------YAB1         <---------YAB1  --------->ARR14(2)     <<<<<<<<<MYB98   <---------ANAC58     <---------TOE2(3)   ------------>CBF      <---------ARR14(2)    ----------->GT1   <---------ANAC58     <---------YAB1     --------->ANAC58    --------->ZAT6 --------TBP          <---------ANAC46 <----------DOF2 --------->ANAC58    <---------TOE2(3)   <----- -ANAC46 <------------CBF<---------MYB46(3)<---------TOE1(3)  --------->ANAC58  --------->MYB52(1)   tttatatgttaaattgaagaaaacgcgtggtggcgggagtgatttatggtaattggtaagcattaagcaatgtgattaagactaacagttctgtgtcatg  16119000      <---------AHL20(2)                                                             --------->ARR11(3)   --------->MYB52(2)                                <---------YAB1                  <---------ARR11(3) <---------MYB52(1)                                  <------ZmHOX2a(2)               <---------GLK1(2) --->O2                      <---------At4g35610    <---------ARR11(3)     <---------YAB1 --->TGA1a     <---------ANAC46                     --------->ARR11(3)    <---------AHL20(2)   <----- ----TGA1a     <---------ANAC58          --------->ATHB12       --------->ATHB12    <---------RVE1(1) --HVH21       <---------ANAC58         <---------YAB1--------->ATHB12    <---------AHL20(1)  <------ ----O2   <---------ICU4     --------->At4g35610   <------ZmHOX2a(1)    <---------YAB1   <-----------GT1   tgtgttagttaatcgtggcttgcatttagacagcgaagcatgctcattggtcaggatcattgtgtttcattggtattatttttaagagatttttctatat  16119100                                                          --------->ARR14(2)                                             --------->ARR11(3)                                             <---------AHL20(2)       <---------AHL20(2)                                --------------->AGL15     <---------ARR14(2)                    <----                <---------YAB1  =====================================================================    <<<<<<<<<GATA-1  <---------TOE2(3)       <---------AHL20(1)   ----------->GT1     <----------DOF2   <-----------GT1 --------->ICU4      ----------->GT1   <------ZmHOX2a(1)<---------ICU4      ======= ----ARR11(3) --------->YAB1    ===================================================================== ---CCA1(2)   ----------->GT1   <---------------AGL15  <---------TOE2(3) <---------ATHB12     -------   ctatttatctattctatggtgataatgttttctaatctatatggtaatatatggttttaggatttgggatgtttaatcaattccataacttttgtgctaa  16119200                             ---------->DOF2                          <---------TOE2(3)                    <---------------AGL15                    --------------->AGL15                   <-----------------AGL2                   ----------------->AGL3                   ----------------->AGL2                   <---------AHL20(2) -----TOE2(3)      ================================================================================== ====================================MADS_MADS     <---------WOX13(1)   --------->ATHB12  --------->ATHB12 ===================================MADS_MADS   <---------YAB1       <-------GAMYB    <-----------GT1 =========MADS_MADS<-----------------AGL3 ---------->DOF2 --------->GLK1(2)   ---------->ID1 -------->AGL15  --------->GLK1(2)<----------DOF2--------->ATHB12    <---------At4g35610 <---------YAB1   gaatggaattgttcttcacaatctttttatggaaagctttatatcaaagtctgattggagaatttatggacagttgatttgttttttttttctcattgga  16119300                             --------->AHL20(2)                       --------->YAB1                       --------->TOE2(3)                            --------->YAB1                      ----------->GT1   --------->ANAC55(2)        <---------YAB1                 <---------TOE2(3)      <---------ANAC55(2)     <---------YAB1               ---------->DOF2<-----------GT1                  --------->TOE2(3)          <---------------AGL15  <---------DAG2               <---------ICU4              <----------DOF2          --------------->AGL15  <----------DOF2              --------->YAB1           <-----------GT1 =========================MADS_MADS   <-----------GT1     <---------MYB52(2)     ----------->GT1   agattgtgttttctgtataaaggaatgttaattaactttattacataacaagagttggaaacaaacattataaaaactgaaatttgttatttctttttag  16119400  Previous    Next  AGI:  At2g38480.1    Description:  integral membrane protein, putative. Identical to UPF0497 membrane protein At2g38480 [Arabidopsis Thaliana] (GB:Q8LE26;GB:O80903;GB:Q94K27); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G36330.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48801.1); contains InterPro domain Protein of unknown function DUF588 (InterPro:IPR006702) Range:  from: 16117819    to: 16118875    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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