Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100     <---------ARR11(3)                                           --------->KAN4(2)   --------->ARR11(3)                                          <---------ICU4 ----->YAB1                                              --------->TOE2(3)               <---------MYB52(1) ----->TOE2(3)           <---------AHL20(2)              --------->TOE1(3)          --------->GLK1(2) ----->TOE1(3)        <---------TOE2(3)            --------->ANAC46                 --------->ARR14(2) -----ATHB12    --------->AHL20(2)               --------->ANAC58                   <---------ARR14(2) >MYB83      --------->TOE1(3)    --------->YAB1 --------->ANAC58                  <---------GLK1(1) >MYB46(1)   --------->TOE2(3)   <---------YAB1  --------->ANAC46              <---------ZAT6 <------   cttaaaatctaaaaaccataaaataatgtaattgtatcatagtcattttgcacacaaaaccataaatattcccagtgcctagtgggaatctgttttttgc  16110300                                                   <---------ALFIN1                                                <------ZmHOX2a(1)    --------->ICU4                                         --------->AHL20(2)     ----------->GT1         <----------DOF2                                         <---------AHL20(2)   ---------->DOF2       <---------GLK1(2)                <<<<<<<<<NAM             <---------YAB1 --------->HSFB2a(2)    <---------ANAC46  <--- <---------MYB52(2)<----------DOF2      --------->YAB1  <---------HSFB2a(2)    <---------ANAC58  ---- -----GT1  <-----------GT1              --------->TOE2(3)  <<<<<<<ZML2         <---------ANAC58 <----   tccactaacaaattttcatccctttggaaatagaatcaccaatattaataggaccactctagaacaaagtaatactgagtttcgtcgattctttttccat  16110400                                   <---------TOE1(3)                                   <---------TOE2(3)                               --------->YAB1                          ------>NtERF2                        --------->RAP2.3(1)                        ------>NtERF2                       <---------ATERF1(1)                       <---------RRTF1(1)                       ------>NtERF2                       <---------DEAR4(2)                       <---------RAP2.3(1)                       <---------RAP2.6(1)                      <---------RAP2.3(3)                      <---------RRTF1(3)                      --------->ANAC46                      <---------DEAR3(1)                      <---------RRTF1(2)                      <---------RAP2.3(2)                             <---------MYB52(1)       ------         ---------->DOF2<------NtERF2                            --------->YAB1               -------    <------ZmHOX2a(2)--------->At4g35610                      --------->YAB1                  <------ ------ICU4          <---------At4g35610                   <---------HSFB2a(2)              <-------- ----->ATHB12        <---------LBD16                       --------->HSFB2a(2)      <------ZmHOX2a(1) -----ATHB12        <-----------RAV1(1)                    ------>ZmHOX2a(1)     <---------LBD16   cattcgatcaacaaagctatttctgcggcgctaaaataaggtttttgtttctcatttattcctagaatcatcgttttttgttttcaggataaactattgt  16110500                                            <-----------HVH21                 <---------ZAT14                                  <---------RAP2.6(2)                    <---------YAB1                                  <---------DEAR3(1)                   --------->YAB1               -                                 --------->RAP2.6(3)                   <---------ICU4               <       <---------At4g35610      <------ZmHOX2a(1)                     <---------ATHB12       <------- --->TOE2(3)                   ----------->HVH21                --------->ANAC58      <---------ARR11(3) ---->GT1                  <---------HSFB2a(2)                  --------->ANAC58      --------->ARR11(3) ---ZAT6            ------------>CBF  <----------DOF2 ---------->DOF2 --------->ICU4 --------->RVE1(1) ----CBF     <---------ICU4--------->HSFB2a(2)  <---------ALFIN1--------->AtLEC2     --------->CCA1(1)   taatatggcagttcatatttatcgcaattctcgaggacggctttgttgtcacacactaaaacgctcatgcaaatgatgactgtagaaatatctacagatg  16110600                                   ------>MYB46(1)                                   ------>MYB83                                 <---------MYB111(1)                                 <---------MYB59                                --------->ANAC55(1)                                --------->ANAC55(2)                                --------->ANAC46                              <---------ALFIN1                           --------->YAB1                             --------->At4g35610                           <---------ICU4                             --------->ZAT2                     --------->ANAC55(2)                              <---------ZAT2                     --------->ANAC58                                 <---------At4g35610                     --------->ANAC46         ------>ZmHOX2a(2)      ----------->RAV1(1)                     <---------ANAC55(2) <----------DOF2            <---------HSFB2a(2) -------->ICU4       --------->ANAC58   <---------ANAC58            --------->HSFB2a(2) ---------YAB1       --------->ANAC55(1)<---------ANAC58        <----------DOF2 --At4g35610   ------------>CBF <---------ANAC55(2)  <---------AHL20(2)   tcatgtttcatttggaattcaatacgtaatcaacacctaatcgcttgatcgatgttaaattcgagactttccagcagaaaatggagaatgagacagaatt  16110700                                                                               <---------bZIP60(1)                                                                      ------>MYB83                                                                      ------>MYB46(1)                                                                    <---------ALFIN1                                                                    <---------MYB111(2)                                                                    <---------MYB55(2)                                                                 <---------ALFIN1      <---------ANAC55(2)                                                                 --------->AtMYB61     <---------ANAC58                                                                <---------MYB55(2)  <---------MYB52(1)                                                                --------->MYB46(3) <---------DEAR3(2)                                                               ------>MYB83--------->SPL7      ------                                                               ------>MYB46(1) --------->bZIP60(1)<--                                                              --------->ANAC46 <---------O2    <-----                                                     ----------->RAV1(1) <---------SPL7--------->ANAC55(2)   <---------MYB46(3)                             --------->ANAC46  --------->MYB46(3) <---------ANAC46  <--------P <------ZmHOX2a(1)     <------ZmHOX2a(1) --------->RAP2.6(2)<---------DAG2 <---------ANAC58 <-------GAMYB        --------->MYB46(3)     ------->TEIL    --------->MYB46(3)--------->O2   <------   gagggttgttcatcaggaagaacaacaacgcgaagaaggagaagatgaatcacagccacaaaacccaccaccagccttacgacgtcgtttcgtgatatat  16110800                                                                  --------->AHL20(1)                                                                 --------->AHL20(2)                                                                 --------->YAB1                                                                 -------->ATHB1                                      <------MYB46(1)            <--------HAHB4                                      <------MYB83               <---------ICU4                                     --------->MYB111(1)         <---------AHL20(2)                                     --------->MYB46(2)          --------->ATHB51                                     --------->MYB59            <---------ATHB12                                    <--------P                  --------->ICU4         <---------CCA1(1)          <---------MYB55(1) <---------CCA1(2)         <---------RVE1(1) <---------ANAC58          ------>ZmHOX2a(1) --->ARR11(3)              <---------ANAC58   <---------ATHB12  <---------ATHB51 --------DOF2  <---------ANAC58    <---------MYB52(1)<----------DOF2                      <---------YAB1 ----ARR11(3)  <---------ANAC58   <---------ZAT2--------->WOX13(1)<---------AHL20(2)      <---------AHL20(2) ---CCA1(2)  <---------AHL20(2) <-----------RAV1(2) --------->TOE2(3)         <----------DOF2   ctttacgttggatattttcttgcaagatggagtgccaggtaggtttccatcaatcctttatctccaattattttgaaactcttttttttttttttattgt  16110900                                                                    <---------ANAC58                                                                    <---------ANAC58           <-----                  --------->YAB1                                <---------------AGL15          ------            <----------DOF2                                     <----------DOF2                <-----    --------->CCA1(2)                                       <----------DOF2                    ------   --------->ARR11(3)                               <---------WOX13(1)                   --------->TOE1(2)   <---------ARR11(3)          <---------ZAT6    <---------YAB1 =====================================   atgaagatataaaactttattcatagtgtattagtgttagacgttttgaagatgatggactactttcttttcttggttttgtgatgcagaacatgggaat  16111000                                                                      --------->GLK1(2)                                                          <-----------RAV1(1)                                                    --------------->AGL15                                                    <---------------AGL15                                                   <-----------------AGL3  <-------GAMYB                                    ----------------->AGL3 <-----------RAV1(1)                               <-----------------AGL2                       ----- ----GLK1(1)                                       ----------------->AGL1                     ------- --->GLK1(1)                                      ------>NtERF2       --------->ARR14(2)      ------- ----ARR14(2)       <---------ALFIN1           <---------At4g35610    <---------ARR14(2)--------->ATHB12 --->ARR14(2)      ------>ZmHOX2a(2)    <---------At4g35610          <---------GLK1(2) <---------ATHB12 ===================================================================MADS_MADS      --------->ZAT14  <   tctctgttgcattgtatatgatccacttgtggccaaactctctgcttctcgctgccatttatggtgctatagaatctggttctactgcaatctttggtcc  16111100                                                                                                -----                                                                                           <---------ZAT14                                                                                           --------->ZAT14                                                                           --------->ZAT6  <---------ZAT18                                      --------->ARR11(3)        <---------GLK1(2)       <---------MYB46(3)                                      <---------ARR11(3)        <---------ARR14(2)     <---------DEAR3(1)                                   <---------TOE1(3)            --------->ARR14(2)     --------->ALFIN1                                   <---------TOE2(3)          --------->LBD16          <---------AtMYB61     <---------PCF2               <---------DOF5.7(2)        --------->HSFB2a(2)    <-----------RAV1(1)  --------->ALFIN1                ---------->DOF2            <---------HSFC1(1)    <---------ANAC58 ------------>AGL1              --------->DOF5.7(2)          --------->HSFC1(1)    <---------ANAC58 -->PCF2                       --------->TOE1(3)             <---------HSFB2a(2)   <---------ANAC46 --->ID1     <-----------HVH21 --------->TOE2(3)        ------>ZmHOX2a(1)  --------->REM1(1)  <------ -----------RAV1(1)     --------->ZAT18               ----------->RAV1(2)------>ZmHOX2a(1) --------->ZAT18   cattgtggggcaatgggtcgagggaatggactacgttaaagttcttagactctggctcctgttccagaacctctcctacactattgctggtggtgcagtc  16111200  Previous    Next  AGI:  At2g38460.1    Description:  iron transporter-related. similar to iron-responsive transporter-related [Arabidopsis thaliana] (TAIR:AT5G03570.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63822.1); contains InterPro domain MFS general substrate transporter (InterPro:IPR016196); contains InterPro domain Ferroportin1; (InterPro:IPR009716) Range:  from: 16110681    to: 16113255    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version