Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            <---------ALFIN1                                               --------->ANAC58                                               --------->ANAC55(1)                                               --------->ANAC58                                  --------->LBD16         --------->AtMYB61                --------->TOE1(2)                                 --------->ANAC58     --------->At4g35610                 -----------                                 --------->ANAC46  ---------->DOF2     ------->GAMYB      ===========                                <------NtERF2  --------->HSFB2a(2)     =============================MYC_MYB                                --------->At4g35610=================================================bZIP_DOF                                <---------LBD16--------->LBD16        --------->MYB46(3)  <---------TGA1a                              <---------DEAR3(1)--------->LBD16     --------->MYB52(1)    --------->TGA1a                <---------At4g35610           <---------LBD16    --------->ANAC46         <---------ZAT2                --------->At4g35610        <---------ALFIN1----------->RAV1(1)            --------->ZAT2                <------ZmHOX2a(2)--------->ANAC58 --------->ARR14(2)----------->RAV1(1) <---------ALFIN1               <-----------HVH21--------->LBD16--------->ANAC46  --------->ANAC58    <-------TEIL           <---------LBD16    --------->SPL7 ------>MYB46(1)     --------->ANAC58   <-----------HVH21       <---------YAB1       <---------SPL7 --------->AtMYB61 --------->AtMYB61   --------->LBD16  --------->ANAC55(2)       <-----------HVH21------>MYB83 --------->DEAR3(1) <---------WRKY18(1)   <-  <---------ANAC55(2) --------->AtMYB61 <-----------GT1  --------->MYB46(3) ----------->HVH21     <--   gaatacttgattatcgggatcagaccacatcgtccgcgcaaaataccacccggaacagcaccaccataagcaacagcctcgaccgggttcacacctgaga  16108700                                              <---------YAB1                                           <---------YAB1                                         <---------GLK1(1)                                        <---------ARR11(3)                                    --------->LBD16        ---------->DOF2             ------>ZmHOX2a(1)                 --------->ZAT14 >RAV1(2)                          --------->TOE1(2)   <---------At5g28300       --------->TOE1(2) ==================bZIP_DOF     --------->ARR11(3) --------->ATHB12   <---------ZAT14 --------MYB52(1)         ----------->GT1--------->GLK1(1) <---------MYB52(1)    --------->TOE1(3) ---------HVH21         ----------->GT1 --------->ARR11(3)<-------GAMYB          --------->TOE2(3)   cgttagggctaaaagaaactatatgagagtgaaaaatcctgagatatcattcttgattaccgttatagtgtctgaactcaaaaccttagacgaactcatg  16108800                                                                                               <-----                                                                                         <-----------                                                                                         <-----------                                                             --------->AHL20(2)         <---------At5g28300                          ---------->DOF2                  <----------DOF2             --------->ARR14(2)                  ===================bZIP_DOF       --------->YAB1                  <---------ANAC55(2)                  <---------TGA1a                  <---------YAB1            <----------DOF2<--------                  <---------O2                  <---------AHL20(2)           --------------->AGL15   ctactaaaaaaaacaaggagacgagagcgaaagaatgcaattgtgaagaatttatgatggcctttatatagacagagctctttattcagtaaccgttatg  16108900                                                                                                   <-                                                                                                <----                                                                                              <------                                                                                              <------                                                                                             <-------                                                           <---------ZAT18              --------->AHL20(2)                                                <---------AHL20(2)                  <---------CCA1(1)                                                --------->AHL20(2)                  <---------RVE1(1) ----YAB1                               --------->AHL20(2) --------->ZAT18         <---------ARR11(3) -AtMYB77                   --------->ZAT18  --------->AHL20(2)                    --------->ARR11(3) -MYB.PH3(1)   --------->TOE2(3)   ----------->GT1  --------->GLK1(2)              <---------AHL20(1) -MYB52(1)    <---------ZAT6<---------ZAT18 --------->AHL20(2)      --------->ARR11(3)  <---------AHL20(2)   aaatagcaaggagctagtcttaatttctagtgggctagggaaaaaaataaaaaaattctagtgggcttaagagctaggcccataagatattttaatatta  16109000                                                                                 <---------AHL20(2)               ------>MYB83                                       --------->AHL20(2)   ------------>CBF       ------>MYB83                            <---------AHL20(2) --------AHL20(2) --------->AtMYB61                              <---------AHL20(2)  <---------AHL20(2) -----AHL20(2) ------>MYB46(1)                          ---------->ID1           --------->AHL20(2) ---YAB1--------->YAB1    ------>MYB46(1)              <-----------GT1<---------AHL20(2)     -------- ---AHL20(2) <---------MYB59                         *TSS  <----------DOF2<---------YAB1    --------- --AHL20(1)  --------->AtMYB61    <------------CBF<---------GLK1(2) <---------YAB1   --------->AHL20(2)   ttttatacaatgagaccaaaccaaaaccaaacaagagattgagaagaaaaccgattttttccttttatttatttttatgtttataaattaaaaatgggaa  16109100                                      <---------ZAT2                                      --------->At4g35610                                      <---------At4g35610                                      --------->ZAT2                                     ----------->RAV1(1)                  ----------->HVH21                                   <---------At4g35610                    <---------ETT(1)                                   --------->LBD16                       --------->DEAR3(2)                                   --------->At4g35610                   ------>ZmHOX2a(2)                                  --------->ANAC46                       ====================HOX2a_HOX2a                                 <---------LBD16                        <------ZmHOX2a(2)                             --------->HSFB2a(1)                        =====================HOX2a_HOX2a                             --------->ZAT2 --------->At4g35610        <---------ARR14(2)                             <---------HSFB2a(1)              ------>ZmHOX2a(1)                  <---                             <---------HSFC1(2)               ==================HOX2a_HOX2a      ----                             --------->HSFC1(2)               =================HOX2a_HOX2a  ---------                             <---------At4g35610             --------->TOE2(3)        ------>ZmHOX2a(1)        <-----------HVH21    --------->At4g35610          --------->ARR14(2)      <---------ARR14(2) --->GT1--------->LBD16     <-----------ARR10      <-------TEIL        --------->ARR14(2) --------->AtLEC2 -->GT1--------->ANAC46    <------ZmHOX2a(1)--------->ZAT2<---------ARR14(2)      --------->ARR14(2)<   aatcgattcccgtcaaaacagggctaagaggagcttccgcagcagtagctggattcatcaaatcctcaaaaccgatccgacccatttcctccatggacag  16109200                           <---------ALFIN1                           --------->AtMYB61                        <---------ALFIN1                        --------->AtMYB61                        --------->DEAR3(1)                       --------->MYB46(3)                     <---------ALFIN1                                --------->MYB55(2)          ----           --------->YAB1 --------->MYB46(3)                         --------->ABI4(2)      ---------          <-------TEILxxxxxxxxxxxxxxxx>smallRNA(s)       <---------At4g35610                <--------    ---------->DOF2  --------->DEAR3(1)            <---------ANAC58  <---------MYB46(3)     --------- ------ARR14(2)      --------->AtMYB61             <---------ANAC58 <---------AtMYB61      --------->ALFIN1 ----->ARR14(2)     --------->MYB46(3)         <---------HSFC1(2)  <---------MYB52(1)   <---------DEAR3(1) --->AtMYB77      --------->ANAC46             --------->HSFC1(2)<---------DEAR3(1)     --------->ALFIN1 ---------ETT(1) --------->MYB46(3)        --------->ANAC46<----------DOF2 <---------YAB1  <---------AtMYB61   ttccgacaaagattcatcatccaccaccaccaccagcgaaactacacgacgtttcgttccgctttcatcggtggtttctgattgtgcgaagcggtggttt  16109300                                                        --------->At4g35610                      --------->TOE1(2)                 <---------At4g35610                     --------->ZAT2                   <-----------RAV1(2)                     <---------ZAT2                 <-----------HVH21                  ---------->DOF2                  <------MYB83 ------>DOF2   <---------At4g35610                 <------MYB46(1) >MYB55(2)     --------->At4g35610                --------->MYB59 -MYB46(3)  <------ZmHOX2a(1)                   <<<<<<<<<MYB98                         <------ZmHOX2a(1) -->GT1   <---------TOE2(3)                     <---------MYB52(1) <---------LBD16   <---------TOE2(3)   aaagacactcttgaggaagctaaagctgggaacatcactatgcaggttttgttaggtcagatgtattactctgggtatggagtccctaaggatgctagaa  16109400                                                                 --------->ATHB12                                                              <-------GAMYB            <-----------GT1                                  <------MYB83           <-----------GT1                                   <---------MYB46(3)       <----------DOF2                                       <------MYB46(1)     ---------->ID1                                         <---------AtMYB61                  ------   <---------ANAC46                           <---------TOE2(3)<--------P --------->KAN4(2)  <-------   <---------ANAC58              <----------DOF2            --------->MYB59           --------->ATHB12   <---------ANAC58 <----------DOF2           <---------TOE1(3)<---------WOX13(1)    <---------YAB1   aggtttcgtctttattccctccctttcaatctcttcttttccaagttttaggtttttttagtttggttgatttgaaaattctctaatttgattagattga  16109500                                                   <---------ICU4                                                   -------->HAHB4                                                   --------->YAB1                                                   --------->ATHB12                                                  --------->ICU4                                                  <---------ATHB12                                                  <---------YAB1             --------->ANAC58                                                 <---------TOE2(3)           --------->ANAC58                  <---------TOE1(3)             --------->YAB1             ---------->DOF2                  <---------TOE2(3)           <---------YAB1             <---------ANAC55(2)            --------------->AGL15          <---------AHL20(2)            --------->ANAC58 --->ATHB12 <----------DOF2                --------->AHL20(2)            <---------YAB1             - --WOX13(1) <---------------AGL15    <---------ANAC46                    --------->ANAC58       <----   tttgcaagtttcttcttttttaggtttttgaatttgattctgtgttttattaatgattaggggagactttggattacgaaagcatcaagagttcgttctt  16109600  Previous    Next  AGI:  At2g38450.1    Description:  binding. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G05360.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48811.1); contains InterPro domain Sel1-like (InterPro:IPR006597) Range:  from: 16109053    to: 16109994    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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