Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <---------At4g35610                                                           --------->At4g35610                ------->GAMYB                  --------->TOE2(3)               --------->MYB46(3)            --------->ARR11(3)             <----------DOF2       ----------->RAV1(1)                   <---------ARR11(3)            <---------ANAC58 ->TOE2(3)    -------->P                    --------->RVE1(1)              <---------ANAC58 ->TOE1(3)--------->TOE2(3)                 --------->CCA1(1)         <---------ICU4        >>>>>>>>>TBF1 -->RAV1(2)  --------->WOX13(1)           --------->AHL20(2)       --------->YAB1   ------->GAMYB   -   aactcacaacaacatcaaccaaaaacgatttcaagataaaacaaaaaaatctcaaacttggagctcaaataagaattgctttacaacgagcgaagaagaa  16102000                                                                                     --------->ZAT14                <---------TOE2(3)                                                    <---------ZAT14            <----------DOF2                          --------->ZAT14                ------>ZmHOX2a(1)        <---------GLK1(2)              --------->YAB1<---------ZAT14      --------->AHL20(2)        - --------->DOF2 <---------TOE1(3)     <---------ATHB12                  <----------DOF2        ------   tataaagacagaaactttaaggtgagaagagagaagtcgaatcatacctgtaggctgtagtcgaaactcaacgtcttttaatattcctgcagagaagtaa  16102100                                              --------->ZAT6                                        --------->WOX13(1)               <---------AHL20(2)         *TSS                         ------------>CBF                   --------->AHL20(2)     --------->ANAC58           <-----------GT1                        <----------DOF2   <------MYB83     --------->ANAC58          <---------AHL20(2)       <---------MYB52(1)               <------MYB46(1) ---------->HVH21          <---------DAG2   <-----------GT1      --------->YAB1     <---------YAB1 --->MYB52(1)              <----------DOF2 --------->AHL20(2)    <---------ICU4 <------------CBF   cagtgacactcaaatagactcttcgctccctttttaatctttcaattaactctcatccgtttctcaaaaatgactttaattagattgtgtttggtttcga  16102200                                                      <------MYB46(1)                                                      <------MYB83                   --------->TOE1(3)                 --------->MYB59                   --------->TOE2(3)                 <---------AtMYB61           <----------ID1                   --------->LBD16        <------------CBF                   --------->HSFB2a(2)      <---------YAB1                       <---------HSFB2a(2)                          <---------AtMYB61     ------------>CBF  --------->ANAC58 <---------ARR14(2)                   <----------ID1   <------ZmHOX2a(2)   --------->ANAC58 --------->ARR14(2)             <---------AHL20(2)   tagggatcacaattggacaaacctcaagcctgaaactatcaggttcccgaggggtttggtcttaaatgcaggttttattgcaacaaggttttggttttgt  16102300                       <---------AHL20(2)                  ------------>CBF                 <-----------GT1              ----------->GT1                                                              <---------TOE1(3)             --------->DAG2                                                     <----------DOF2            ---------->DOF2  --------->ANAC55(2)                     --------->TOE2(3)<---------ANAC46       --------->ZAT6  --------->AHL20(2)               ---------->DOF2   ---------->DOF2  <---------TOE2(3)   aagaatttttcactaaaagtaacaattttttaagtatttctggctatcgaaaaatagaaaaagaaatgttttcttaaaaagtcttttagcgttgaggttc  16102400                                               <<<<<<<<<GATA-3                                               <<<<<<<<<GATA-1                                               <<<<<<<<<GATA-4                                       <---------RAP2.6(3)                                       ------>NtERF2                                      --------->RAP2.3(3)                                      --------->RAP2.3(2)                                     --------->RAP2.3(1)                               <-----------TGA1                                     --------->ORA47(2)                                <-----------HVH21                                    ------>NtERF2                                     <---------TGA2(1)                                   --------->ANAC46                                   --------->bZIP60(1)                                  --------->MYB46(3)                                  --------->TGA2(1)                                <---------ARR14(2)                                    <---------bZIP60(1)                               <---------CCA1(2)                                   --------->bZIP60(1)                          -------->P--------->LBD16   ---------->DOF2     --------->ZAT2   <---------ANAC55(2)                          ------>MYB83--------->DEAR3(1)<---------HSFB2a(1)        <---------bZIP60(1)                          ------>MYB46(1)      <<<<<<<<<GATA-2            --------->At4g35610       <       *TSS      <----------DOF2--------->ARR14(2) --------->ANAC46       <---------ZAT2   --------->ANAC55(2) <---------GLK1(2)       <---------ALFIN1     --------->ARR14(2)          <---------At4g35610<-------   tcagactctctctctctctctttgcccctacctatatccgccgtcttgaatccacagaaagtccgttttagtttccagctaagtgatgtcgtcacatatc  16102500         <-----------HVH21        <------MYB46(1)        <------MYB83        <---------DEAR3(2)       <---------MYB46(3)       <---------DEAR3(1)      <---------ORA47(1)                                                                          <--    <---------MYB46(3)                                                                            ---    --------->MYB55(2)                                        <---------ARR11(3)                  ---   <---------AtMYB61                                          --------->ARR11(3)                  <-- -----------RAV1(1)                  <----------DOF2      ---------->DOF2                     ------- --CCA1(2)                        --------->GLK1(2)  <----------DOF2  <----------DOF2---------->DOF2   taatggtggtcggtcactacttaaatgaagacagagaagcttttctagtcttcttctttctaaagttcttacctttagaatttgaacaaaagtatcagcg  16102600                                                                              ------>ZmHOX2a(2)                                                                             <------ZmHOX2a(2)                                                                            --------->GLK1(2)                                                                            <---------ARR11(3)                                                                            --------->ARR14(2)                                                                            <---------ARR14(2)                                                                            <---------AGP1                                                                            <---------ARR11(1)                                                                           <XXXXXXXXXXXXXXXXXXXXMIR168A/B                                                                           <---------CCA1(2)                                                                           <---------ARR14(1)                                                                          --------->LBD16                                            ------>MYB83                ------>ZmHOX2a(2)                                <---------DOF5.7(2)                     <---------LBD16                               --------->WRKY45                        --------->CCA1(2)                               --------->WRKY38(1)                     --------->ARR14(1)                               --------->WRKY12                        <------ZmHOX2a(2)                               ----------->HVH21                      --------->ARR14(2)           <-                              <---------MYB52(1)<---------ANAC55(2)   <---------ARR14(2)          --- -------ZAT2                  --------->DOF5.7(2)                     --------->ARR11(3)        ----- ------>At4g35610            <---------At4g35610--------->ANAC55(2)   --------->AGP1      <---------At4g35610 ------>ZAT2                 <-------GAMYB --------->WOX13(1)        --------->GLK1(1) <---------ZAT2 -------At4g35610           <---------ANAC46------>MYB46(1)          --------->At4g35610  --------->At4g35610 -->At4g35610  --------->At4g35610    <---------SPL7 <---------ANAC46<---------GLK1(1) <---------At4g35610   agctgatcagacagagaagctcaaacaatgccgttgacgaggtaccaatctcgtaacgagtatggattagcagatccggatctgtatcaagctgctgata  16102700                                                                       ------>ZmHOX2a(2)                                                                     ----------------------->TaNAC69(2)                                                                     <---------ARR11(3)        ---------->DOF2               <------MYB46(1)                --------->ARR11(3)             -     ----------->RAV1(2)              <------MYB83         <---------WRKY12                         < ----------->HVH21                  <---------ANAC46     <-----------HVH21                          - --------ICU4                       <---------ANAC58    <---------ANAC58                            < ------>ICU4            <------ZmHOX2a(1)               <---------ANAC46                        ----- ----->DOF2       <----------DOF2   <---------ANAC58    <---------ANAC58                       <-----   aagatgaccctgaagctctgcttgaaggagtcgctatggctggtctcgttggcattttgcgtcaactcggtgatctcgctgagtaagtttctctccaatc  16102800                                                                                           <---------HSFB2a(2)                                                                                           --------->HSFB2a(2)                                                                                       <---------ANAC58                                                                                       <-------GAMYB                                                                                       <---------ANAC58                                                                                      <------MYB83               ------>ZmHOX2a(2)                                                      <------MYB46(1)             <---------ARR11(3)                              <----------ID1       --------->ARR14(2) -------->HSFC1(2)                                        --------->DAG2    <---------ARR14(2) ---------HSFB2a(1)                                      ---------->DOF2    --------->ARR14(2) -------->HSFB2a(1)                          --------->ARR14(2)             --------->GLK1(2)    ---- ---------HSFC1(2)            <---------ARR14(2)   <---------MYB46(3)       ------->TEIL <---------MYB46(3) ---->YAB1<---------WOX13(1)  --------->ARR14(2)  <---------MYB52(1)  <---------YAB1 <---------AtMYB61 ----ATHB12  --------->ARR11(3)              <---------ARR14(2)     --------->YAB1<---------ARR14(2)   gaaatttctctaattgatctctaagcgcatcgaattcgaagttttggaatccgttgttgtaaagcgacaattttgatgaatctggatttggttgtggaag  16102900  Previous    Next  AGI:  At2g38430.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G54310.1); similar to unknown [Populus trichocarpa] (GB:ABK94232.1) Range:  from: 16100017    to: 16102109    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g38440.1    Description:  ITB1 (IRREGULAR TRICHOME BRANCH1). Identical to Protein SCAR2 (SCAR2) [Arabidopsis Thaliana] (GB:Q5XPJ9;GB:O80907); similar to WAVE3 [Arabidopsis thaliana] (TAIR:AT5G01730.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83781.1); contains InterPro domain Actin-binding WH2 (InterPro:IPR003124) Range:  from: 16102407    to: 16108299    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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