Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     --------->ARR14(2)                                                            ------>MYB46(1)                                 <---------ARR11(3)         -------->P                         <-----                           <---------ANAC55(2)              ------>MYB83        <---------AtLEC2                        --------->ARR14(2)       <---------ICU4    <---------ARR14(2)   --------->YAB1                        <---------ARR14(2)      <---------ATHB12  ------>MYB83<---------YAB1  <------                 <---------At4g35610          --------->WOX13(1)  ------>MYB46(1)   <---------AHL20(2) --------->RAV1(1)  <-------TEIL --------->ARR11(3)       --------->AtMYB61<---------ATHB51<--------- --------ID1     --------->At4g35610 <-------TEIL--------->YAB1 --------->AtMYB61------->TEIL -------   gccacaaaaccattaacacagatgcaaatatgtaagatgttcatactccaatcaatactaccaacaccaaatcccaaattatgcatgtaattgtaacctt  16096900                  --------->ICU4                  <---------ATHB12                                 --------->YAB1             --------->ANAC58                                     <---------ATHB12             --------->ANAC55(2)                                 --------->ANAC58             <---------ANAC55(2)                                 --------->ANAC58             --------->ANAC46       ------>MYB83                --------->WOX13(1)     <---------ICU4--------->YAB1   ------>MYB46(1)            --------->MYB46(3)               <----  --------->YAB1--------->WOX13(1) --------->WOX13(1)       <---------ZAT18          ------>MYB46(1) -----DOF2   --------->ANAC55(1)  --------->AtMYB61        <---------MYB52(2)        ------>MYB83<--- ---DAG2--------->YAB1           --------->MYB46(3)       --------->At4g35610      --------------->AGL15 --GT1  <---------ICU4          -------->P <---------ARR11(3) <---------KAN4(2)    --------->AtMYB61< -->TOE2(3)  --------->ANAC58  --------->WOX13(1)         <---------At4g35610--------->ANAC46   -----   tttatcaaaattatcacgcaatcataagaacatcaaccaatccaagataaatccaattgcagcgaacaatcaacaattcccaacaccaaatcgagcaaaa  16097000                                                                                                    <                                                                                                   --                                                                                                  ---                                                                                                  <--                                                                ---------->DOF2                  ----                                                             >>>>>>>>>MYB98                     <----                                                            --------->MYB52(1)                  <----                               --------->GLK1(1)            ------>MYB46(1)                   -------                               <---------GLK1(1)            ------>MYB83        <---------DAG2<------NtERF2                              --------->ARR14(2)          <---------MYB46(2)<--------P        -------                              <---------ARR14(2)       <------ZmHOX2a(1)<---------ANAC46    ---------                              <---------GLK1(2)        =====================HOX2a_HOX2a     <--------       <---------ZAT14      <---------TOE1(2)          ======================HOX2a_HOX2a   --------->MYB46(3)       --------->ZAT14      <---------TOE2(2)       --------->YAB1    ------>ZmHOX2a(2)    <---------MYB55(2)  <---------YAB1      <---------ARR14(2)            <---------ICU4   <------ZmHOX2a(2)   ------->GAMYB -----AHL20(2)        --------->ARR14(2)           <---------ATHB12 --------->ARR11(3)  --------->MYB46(3) ------ICU4           <---------GLK1(2)          --------->WOX13(1) <---------ARR11(3) --------->At4g35610 -----------GT1  --------->MYB52(1)   --------->ARR14(2)  <---------MYB111(1)   <----------DOF2------ ---->AHL20(2)   <-----------GT1      <---------ARR14(2)  <---------MYB59  <---------MYB52(1)------>NtERF2   aattaccagtgaagagaattaacagaatcgcagatttccatattcgtagtccaatcaggacctaacaaaagatcgctggtagctttatcaacagccaccg  16097100                                                                     <-----------GT1     --------->ZAT2                                               <---------ICU4     --------->At4g35610                                       --------->YAB1     <---------At4g35610                                       <---------AHL20(1)     <---------ZAT2                                            <---------AHL20(2) --------->DEAR3(1)                                            --------->AHL20(2) ------NtERF2                                                  <---------ICU4 ---->NtERF2                                                   <--------ATHB1 ------>DEAR3(1)                                              --------->ICU4 -------DEAR3(1)                                              <---------YAB1 ----->ATERF1(1)    --------------------->WRI1             <---------YAB1 -----ATERF1(1)  ------>NtERF2                             --------->ICU4 -------HVH21   --------->ANAC58                         --------->YAB1 -->DEAR3(2)    --------->ANAC46                         <---------ICU4 -->MYB46(3)    --------->ANAC58                      --------->YAB1<-----------GT1 >DEAR3(1)      <---------bZIP60(1)      <---------At4g35610<---------ICU4     --------->ANAC58 -ALFIN1        --------->bZIP60(1)      --------->At4g35610--------->YAB1     --------->ANAC58 --->DEAR3(1) <---------ATERF1(1) <------ZmHOX2a(2)  --------->AHL20(2)        --------->ANAC46   tcgccgaagctgaagacgacgccatagtcttcaccgatcaaacagctcaacacgattaataataataatttttccgacttcacgaaaatcaaacaaaaaa  16097200                      ---------->DOF2                   --------->At4g35610                   <------NtERF2                       <---------DAG2                  ------>NtERF2                  <---------ICU4                 --------->DEAR3(1)            --------->GLK1(2)              --------->ANAC46                 <---------ARR11(3)      <---------ARR14(3)                       --------->ARR11(3)      --------->GLK1(2)                        <-----------ARR10      <---------ARR11(3)                      <---------GLK1(2)                         <----------DOF2      <-----------ARR10                 --------->At4g35610                        <----------DOF2      <---------ARR14(2)                <------NtERF2  <----------DOF2            <---------ANAC58      --------->ARR14(3)                <---------At4g35610        <----------DOF2<---------ANAC58      --------->ARR11(3)              <---------WRKY12<---------ANAC58          <-----------GT1     -      --------->ARR14(2)            <-----------HVH21 <---------ANAC58----------->GT1 *TSS         <-   ccctagaaaatcttcttcgccagcgaaagagagaacgaagtcagcgaagaatctttgcttttttaaggccttttgtaaattgtttctttccttttctatc  16097300                                           <----------DOF2                                   ----------->GT1                                  ----------->GT1                                --------->DAG2                               ---------->DOF2                           --------->AHL20(2)                          <---------AHL20(2)                            ------>ZmHOX2a(2)                          --------->AHL20(2)                    <---------YAB1            ---------->DOF2<---------AHL20(2)      <-----------GT1  ------>ZmHOX2a(2)    <------ZmHOX2a(1) <---------AHL20(2)--------->GLK1(2)--------->AHL20(2)<---------MYB52(1) -------->LBD16      --------->AHL20(2) <---------ARR11(3)--------->AHL20(2) --------HSFB2a(2)   <---------AHL20(2) --------->ARR11(3)<---------AHL20(2)   ---------->ID1   tccagaggatgaaacaaagaaattttaatttaaaaaagggaaaatcttttttttttctatttatttctgatcgatctgtttgttttttttttttgttctg  16097400                             --------->ANAC58                             --------->ANAC46                             --------->ANAC58                       --------->LBD16                       <---------At4g35610                    <<<<<<<<<<E2Fe                    <<<<<<<<<<E2Fd                    <<<<<<<<<<E2Fc                    <<<<<<<<<<E2Fa                  <-----------GT1               <---------ARR14(2)               --------->ARR14(2)                        <<<<<<<<CAMTA3               <-----------ARR10                        <-------MYC3                    <---------YAB1           <------NtERF2  <---------ZAT14               ------->MYC3          --------->TOE1(3)           --------->At5g28300    <----------DOF2      --------->ANAC58       --------->TOE2(3)     -          ------>NtERF2--------->At4g35610             --------->ANAC46      ----------->GT1        <         <---------bZIP60(1)<---------ZAT18  <---------ANAC58               <---------TOE1(3)      --        --------->RAP2.6(3)<---------ALFIN1  ----------->GT1               <---------DOF5.7(2)     <-       --------->MYB52(1) --------->ZAT14    <---------ANAC58             <---------WRKY12         <-      ----------->TGA1--------->ANAC46       <---------ANAC46             <---------WRKY45---------->DOF2   <---------AHL20(2)<---------LBD16  <----------DOF2  --------->ANAC58   <---------WRKY38(1)     <--   agtttttaatgacggcaaattttcccgctgcacgctctttctttagtgcgtgaaaccacgcgtttgtattatgtagtcaacgttaaaactattaaagact  16097500                    -------->HAHB4                    <--------ATHB1                    --------->YAB1          <---------ANAC58          <---------ANAC58          <---------ANAC55(1)                                                                  <-----          <---------ANAC46                                                                 --------->ALFIN1    <---------AHL20(2)     <----------DOF2                                               <---------ANAC46 -------->ATHB12    <---------ICU4                                                       <---------ANAC58 ---------ICU4     --------->ICU4                                              <---------AHL20(2) ------->ICU4      <---------ATHB51       --------->ARR11(3)          <-----------GT1    --------->ANAC55(2) --------ATHB12    <---------YAB1        <---------CCA1(2)            --------->ZAT6     <---------ANAC55(1) --------YAB1----------->GT1      <-----------RAV1(1)             <---------AHL20(2)     <---------ANAC58 -------TOE2(3)  --------->YAB1  <---------TOE2(3)                --------->AHL20(2)     <---------ANAC55(2)   aatgatttttttacgtggataataattctctttctaatgttgtttatcttgttcttaagagattggattttaatactatatttatacgattacgtgttgg  16097600                                                                                        --------->ATHB12                                                                               <-------MYC3                               ----------->GT1 --------->ALFIN1                ------->MYC3                              <---------------AtSPL8                          <---------O2  <------MYB46(1)                           ---------->DOF2  --------->DAG2                   <<<<<<<<<<BZIP12                      --------->YAB1      ---------->DOF2                ----------->HVH21  <------MYB83                      ----------->GT1    <---------AHL20(2)             <---------WOX13(1)<---------WOX13(1)                     <---------YAB1   --------->YAB1 <-------TEIL     --------->ATHB12 <---------YAB1 ----MYB46(3)   <---------ARR11(3)   <---------AHL20(2)   <---------AHL20(2) <<<<<<<<<<ABI5<---------MYB46(3)   atgagaattatctaagaagatgtatgataaaaagggtatataataaaaggtgggatacattttatctacaattgattgacacgttgtttttgattggtgc  16097700                                                             <---------ZAT14                                                             --------->ZAT14                                   --------->AHL20(2)        <---------ZAT18                                   <---------ICU4 --------->TOE2(3)                                  --------->AHL20(2)         --------->ZAT18                                  <---------AHL20(2)    --------->CCA1(2)                     -------                                --------->YAB1    <----------DOF2                         <---------AHL20(2)                  ---------->DOF2<---------AHL20(1)   <<<<<<<<<RAP2.2                    --------->AHL20(2)          ---------->DOF2----------->GT1       <-----------GT1                       --------------->AGL15     --------->YAB1   <------ZmHOX2a(1)     --------->YAB1 --------------->AtSPL8 <-----------GT1   tatactattagaaaaagatgaaaaggatagtttaaaataatttctcttataactttagatatgtgtactctatttgatatcatataaccaattttataaa  16097800  Previous    Next  AGI:  At2g38410.1    Description:  VHS domain-containing protein / GAT domain-containing protein. similar to VHS domain-containing protein / GAT domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G01760.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48826.1); contains InterPro domain GAT; (InterPro:IPR004152); contains InterPro domain ENTH/VHS (InterPro:IPR008942); contains InterPro domain VHS; (InterPro:IPR002014) Range:  from: 16093708    to: 16097286    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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