Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          --------->At4g35610                                        <---------At4g35610                                        ----------->RAV1(2)                                       ------->TEIL                                  --------->CCA1(2)                                 <---------GLK1(2)                                 <---------ARR14(2)                                 --------->ARR14(2)                           --------->ARR11(3) -------ARR14(2)           <---------ARR11(3)              <----------DOF2 --->ID1                  --------->CCA1(1)               --------->TOE2(3)             --------->AHL20(2) -ANAC46                  --------->RVE1(1)--------->At4g35610                        <--------------   tattcggctctgatgttgaatacttcaaatatctagatttgcatctgatgcaattgaaaaccttttttttttttgcaattgaaaactcatatatatagta  16056700                                                           --------->ARR14(2)                                                           --------->ARR11(3)                                                           <---------ARR11(3)                                                           <---------ARR14(2)     --------->CCA1(2)      --------->ARR11(3)    <---------YAB1                     ----------------    <---------ARR11(3)     <---------CCA1(2)    <-----------GT1                      <----------DOF2 -AGL15                  <---------CCA1(2)      --------->YAB1               <---------GLK1(1)   tggctagatatatgcaattgaaaactcatatatctagccatactatgaaataacaattgaagaacttctaagttgaaagaattctcactttgtatgtttt  16056800                                                                 ------->TEIL                                                                 <---------ARR14(2)                                                                 --------->ARR14(2)                                                                 --------->GLK1(2)                                                                 <-----------ARR10                                                                <---------GLK1(2)                           --------------->AGL15          --------->YAB1      --------->CCA1(2)         ------>ZmHOX2a(2) <---------------AGL15         <---------ATHB12    <---------ARR11(3)       <---------ARR11(3) ----------------->AGL2       --------->WOX13(1)    --------->ARR11(3)       --------->ARR11(3) <-----------------AGL1   --------->ARR14(2)     ------>ZmHOX2a(1)  ------->TEIL       <---------ATHB12       ---------->DOF2     <---------ARR14(1) --------->TOE2(3) ----->WRI1<-----------GT1----------------->AGL3   <---------ARR14(2)     <---------HSFB2a(2)   gatgaatttgatcttacattccaatcgttccaaatatcgaaactcttaaagcgtattcaatcaaacgaatctcgtcctagatataccttggtcatttcaa  16056900                                                                                        <---------ANAC58                                                          <---------ZAT6      <---------AHL20(1)                                                 <---------YAB1               --------->AHL20(1)                      --------->ANAC58          <---------AHL20(2)            --------->ARR11(3)  ---                      --------->ANAC58          --------->AHL20(2)         <---------AHL20(2)     ---          --------->DAG2                        <---------AHL20(1)         --------->AHL20(2)    <---         ---------->DOF2      ---------->DOF2  --------->YAB1     --------->CCA1(2)     <---------ANAC58    ----------->GT1--------->WRKY18(1)        <---------YAB1    --------->CCA1(2)   <-----------HVH21   gaagaagagaaaaaagttatggtcaagaaactaaaagtctaaacccatattataattctagtgttgatatacgagaattatatattggtcacttgcccaa  16057000         <---------ANAC46       <---------ANAC58       <---------ANAC58       <---------ANAC46         --------->MYB46(3)      <---------MYB52(1)     --------->ARR11(3)     >>>>>>>>>>WRKY63           --------->At5g28300                        <--    --------->RVE1(1)     <<<<<<<<<<WRKY18            ----------->GT1                          <-----    --------->CCA1(1)     --------->ANAC58            --------->TOE2(3)            <---------MYB52(1) ------>AHL20(2)          --------->ANAC58         --------->ARR14(2)--------->ANAC46      <---------MYB52(1) ------>YAB1           --------->WRKY18(1)         <---------ARR14(2)--------->ANAC58   ---------->ID1 ------ATHB12         <-----------HVH21       ----------->GT1        --------->ANAC58  <-----------GT1   ttaaaaatatcgtgtatagaaaacagtcaagtcaacaactatagcaaggggcaaaaccgtaatttcacaacaagcaacttgctcggttttttcgttatca  16057100                                                        <---------ALFIN1                         ----                                                   --------->DEAR3(1)                    <---------ANAC58         ------->TEIL                             --------->ATERF1(1)              --------->ATHB12 -------ALFIN1                             ---------->DOF2 <----------DOF2  ---------->DOF2  <------- ------GT1                               *TSS--------->DAG2<---------DAG2<----------DOF2 <---------ANAC58   ccactcacatgaactctgcattaaaaactctatctctctcaaatcgaaaggcacagcccaacttttcgcaagtcgctgtaaagtttgatttgcttctttt  16057200                                                                                                 <---                                                                                          --------->CCA1(2)                                                                                         --------->ARR14(2)                                ------>ZmHOX2a(1)                                   <------ZmHOX2a(2) ----->AHL20(2)            <----------DOF2------>ZmHOX2a(1)                        --------->ARR11(3) ---DOF2          ------>ZmHOX2a(1)      --------->TOE2(3)                ---------->DOF2<---------ARR11(3)   tatatacacacatacttctcctccatacactttcctcttcaatcctcagttttttttctaagccctaataccatctcaaagaagagatcaagatttgaaa  16057300                                                                                    <---------At4g35610                                                                                --------->GLK1(2)                                    --------->WRKY38(1)                        <---------GLK1(2)                                    <---------ZAT14                            --------->ARR14(2)                                    --------->ZAT14                            <---------ARR14(2)                                    --------->WRKY12                          <---------At4g35610                                   <---------MYB52(1)                   <---------ANAC58                                   --------->DOF5.7(2)                  <---------ANAC58                                 <---------ANAC58                       <---------ANAC46                            <---------ANAC58           <---------SPL7<---------ARR14(2)            <-                            <---------ANAC58        --------->LBD16  --------->GLK1(2)           <---                          <---------YAB1     ------>ZmHOX2a(1)      <---------ARR14(2)   <---------YAB1                    <------ZmHOX2a(2)    --------->ORA47(1)        <---------HSFB2a(1)  <XXXXXXXXXXXX                    ================================HOX2a_HOX2a    <----------TaMYB80  --------->YAB1                   --------->AGP1<---------ANAC58   ------>NtERF2  --------->HSFC1(2) <---------ATHB12                  --------->At4g35610   --------->DEAR3(1)         --------->HSFB2a(1)--------->ICU4 ------ATHB12     <---------At4g35610 <---------At5g28300<-----------HVH21<---------MYB52(1) ------>ZmHOX2a(2)   tcaagaagacaccattactcagatcaacatgcttgccgttcaccgtccttcttccgccgtatcagacggagattccgttcagattccgatgatgatcgcg  16057400                                      --------->DEAR3(1)                                     --------->ANAC58                                     --------->ANAC46                                     --------->ANAC58                                     --------->MYB46(3)                                   <---------ALFIN1                                  <---------REM1(2)                                  <---------ZAT14                              <---------ATERF1(1)                           ==============================================MYC_MYB                           --------->ANAC58                           --------->ANAC55(2)                           <---------O2                                       --------->ALFIN1                           --------->ANAC46                           <---------MYB59  --------->LBD16                           <---------ANAC55(2)                    <------MYB83<-----------RAV1(1)                           --------->O2                           <------MYB46(1)      ------>NtERF2                           --------->TGA1a                       <---------MYB46(3)   <---------ALFIN1                           <---------TGA1a<---------At4g35610    --------->MYB59      --------->DEAR3(1)                           --------->ANAC58                      <---------AtMYB61   <---------LBD16 --------DEAR3(2)        <-------------DYT1              --------->ANAC46  <---------ICU4  <---------MYB52(1) ---NtERF2              ----------->HVH21 <------NtERF2<---------ALFIN1------>ZmHOX2a(1)  --------->At5g28300 XXXXXXXXXMIR2935      <-----------HVH21<---------DEAR3(1)      <--------P<---------ATHB12<-------GAMYB   tcgtttcaaaaacgttttccttctctctcacgcgactccacggccgctcgttttcacacacacgaggttggtcctaatcagtgttgctccgccgttattc  16057500                                                                                                    <                                                                                                    -                                                                                                   <-                                                                                                   --                                      --------->ANAC58                                            <--        <---------At4g35610           --------->ANAC46                                            ---        --------->At4g35610           --------->ANAC58                                           <---    ------>ZmHOX2a(2)                --------->SPL7                                              <---   <------ZmHOX2a(2)            <-----------HVH21                                               -----   <---------GLK1(1)          --------->SPL7                                                    <----   --------->GLK1(1)       <------MYB46(1)                                                    <------  --------->ARR14(3)       <------MYB83                   --------->ANAC58                   <-------  --------->ARR11(3)      <---------AtMYB61           --------->ANAC46                   <-----------HVH21  <---------ARR11(3)      --------->MYB59--------->DEAR3(1)                              <-----------TGA1  --------->ARR14(2)      <---------MYB46(3)   --------->YAB1                           <---------ANAC58  <---------ARR14(2)     <---------MYB55(1) <----------DOF2                        <---------REM1(1)- --------->GLK1(1)      <---------MYB52(1)------>NtERF2   --------->ANAC58    ---------->DOF2-------- <---------GLK1(1) <---------ALFIN1<---------SPL7    ------->GAMYB     <----------DOF2  <---------ANAC58   aagagatctccgctccaatctccaccgtttggtccgtcgtacgccgctttgataacccacaagcttacaaacactttctcaaaagctgtagcgtcatcgg  16057600  Previous    Next  AGI:  At2g38310.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G05440.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48777.1); contains InterPro domain Bet v I allergen; (InterPro:IPR000916); contains InterPro domain Streptomyces cyclase/dehydrase (InterPro:IPR005031) Range:  from: 16057141    to: 16058246    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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