Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                    <                                                                                                    <                                                                                                    - 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                                                                                                 <--                                                                                                  <--                                                                                                  <--                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 <--- 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                                                                                               -----                                                                                                -----                                                                                                -----                                                                                               ------                                                                                               ------                                                                                               <-----                        <---------SPL7                                                        -------                       <---------ANAC58                                                       -------          <---------CCA1(2)                                                       <-----------HVH21--  <------MYB46(1)      <---------ANAC58                                          --------->DEAR3(1)<-  <------MYB83         <---------ANAC46                                    <---------MYB52(1)-------- <---------AtMYB61<---------At4g35610            <------ZmHOX2a(1)        <-------GAMYB     <-------- --------->MYB59  --------->At4g35610         <------ZmHOX2a(1)      ----------->HVH21   <-----------HVH21 -----TOE1(3)   <-----------RAV1(2)        <-----------RAV1(2)     --------->ANAC46     <---------CCA1(2) -----TOE2(3) <-----------HVH21   <---------STY1(1)                --------->ANAC55(2)------>ZmHOX2a(1)   ggtttggttctcataccttcagatggcgtatgaagcctagggagaccaggaggaatttcatcgacataaacgtgaccgttgctccgtcctgtatcaccgc  16045600         --------->DEAR3(1)         <---------ALFIN1        <------NtERF2        --------->ATERF1(1)       ------>NtERF2       --------->ABI4(1)       <---------ATERF1(1)      --------->RAP2.6(2)      --------->RAP2.3(2)      --------->ATERF1(2)      <---------ATERF1(2)      --------->DREB2C(2)      --------->DEAR3(1)      --------->RAP2.3(3)      --------->RRTF1(2)      --------->ANAC46      --------->ANAC58      --------->ANAC58      --------->RRTF1(3)     --------->ERF1     --------->ATERF1(1)     <------NtERF2     --------->RAP2.3(1)     --------->RAP2.6(1)     --------->DEAR4(2)     --------->RRTF1(1)     --------->ORA47(2)    <---------RAP2.3(1)    <---------ATERF1(1)    <---------DEAR4(2)    --------->At4g35610    <---------At4g35610    --------->ABI4(1)    <---------DREB2C(1)    ------>NtERF2   --------->RRTF1(3)   --------->ANAC46   <---------ALFIN1   --------->RRTF1(2)   --------->RAP2.3(3)   --------->DEAR3(1)   <---------DEAR3(1)   <---------ATERF1(2)   --------->ATERF1(2)   --------->RAP2.3(2)   --------->RAP2.6(2)  <------NtERF2  --------->ATERF1(1)  --------->ORA47(2)  --------->RAP2.6(1)  --------->RAP2.3(1)  --------->ERF1  --------->RRTF1(1)  --------->DEAR4(2) --------->ABI4(1) <---------ATERF1(1) --------->At4g35610 <---------At4g35610 <---------DEAR4(2) ------>NtERF2 <---------DREB2C(1) <---------RAP2.3(1) -------->ATERF1(2) ---------ATERF1(2) ---------DEAR3(1) -------->DEAR3(1) -------->RAP2.6(2) -------->ANAC46 -------->RAP2.3(2) ---------ALFIN1 -------->RRTF1(3) -------->RAP2.3(3) -------->RRTF1(2) ------->ATERF1(1) ------->RAP2.6(1) ------->DEAR4(2) ------->RRTF1(1) ------->ORA47(2)                                                                                ---- ------->RAP2.3(1)                                                                               ---- --->NtERF2                                                                                      <--- -------RAP2.3(1)                                                                               ----- ------>At4g35610                                                                               <---- ------>ABI4(1)                                                                                 ----- -------At4g35610                                                                              ------ -------DEAR4(2)                                                                               ------ -------ATERF1(1)                                                                              <----- -------DREB2C(1)                                                                              ------ ----->DEAR3(1)                                                                                ------ ------DEAR3(1)                                                                                <----- ------ATERF1(2)                                                                               ------ ----->ATERF1(2)                                                                               ------ ----->RRTF1(3)                                                                                ------ ------ALFIN1                                                                                  ------ ----->ANAC46                                                                                 ------- ----->RAP2.3(3)                                                                              ------- ----->RAP2.6(2)                                                                              ------- ----->RAP2.3(2)                                                                              ------- ----->RRTF1(2)                                                                               ------- ---->ORA47(2)                                                                                ------- ---->DEAR4(2)                                                                                ------- ---->ERF1                                                                                   -------- ---->RAP2.3(1)                                                                              <------- ---->RRTF1(1)                                                                               <------- ---->RAP2.6(1)                                                                              -------- ---->ATERF1(1)                                                                              -------- --->ABI4(1)                                                                                 ------>NtERF2 >NtERF2--------->ERF1                                                                      <-------- ----ATERF1(1)                    --------->HSFB2a(2)                                       --------- -->ANAC46------>NtERF2           <---------HSFB2a(2)                                       --------- -->DEAR3(1)             --------->ALFIN1                                                  --------->ATERF1(1) ------->ERF1       ---------->DOF2                                                        <------NtERF2 -----NtERF2     --------->At5g28300            <------ZmHOX2a(1)          ------>MYB83    --------->RAP2.3(1) ->MYB46(3) --------->AtMYB61   --------->At4g35610                        ------>MYB46(1)<---------ATERF1(1) -At5g28300--------->MYB46(3)   <---------At4g35610                   <-----------GT1     <---------RAP2.3(1)   cgccgccgccgccaccatcggtaaaaggagtggcatctggaagagaagcaggactgcgaccatattggtcattaaccttccttctaacttggctccgccg  16045700 ----->ATERF1(1) ----->bZIP60(2) ---NtERF2 ->NtERF2 -----ATERF1(1) ---->ABI4(1) --->RRTF1(2) --->RAP2.3(3) ----ALFIN1 --->RAP2.3(2) --->RAP2.6(2) ----ATERF1(2) --->ATERF1(2) --->DREB2C(2) --->DEAR3(1) --->RRTF1(3) -->ATERF1(1) -->ERF1 -->RRTF1(1) -->RAP2.3(1) -->ORA47(2) -->RAP2.6(1) -->DEAR4(2) ->LBD16 --At4g35610                                                                     <---------ANAC58 --ATERF1(1)                                              --------->ANAC58       <---------ANAC58 ->At4g35610                                          -------->P                 <---------ANAC46 ->ABI4(1)            <-------TEIL            --------->ANAC46              <---------ANAC58 -ALFIN1    --------->ARR14(2)              <-----------GT1       <------ZmHOX2a(1)       <---------AtLEC2 >DEAR3(1)  <---------ARR14(2)            <----------DOF2 --------->ANAC58  <---------ANAC58        - >ANAC46    <---------GLK1(2) <-----------HVH21     ------>ZmHOX2a(1)     <-------TEIL   <-------TEIL   cctcaccaaggtcggattttgaggctcgtctccatcagggttctctttacgctccttaccacgctcaaggactagattcagtgccttgaaatgcatgaaa  16045800                                                                                                  <--                     --------->At4g35610                                                          ---                     --------->ZAT2                                                  --------->RVE1(1)                     <---------ZAT2                                                 --------->GLK1(2)                     --------->HSFC1(2)                     <---------ANAC58        <---------ARR11(3)                     <---------HSFC1(2)          <------MYB46(1)                   <---------GLK1(2)                     <---------HSFB2a(1)         ----------->GT1                --------->YAB1    <--                     --------->HSFB2a(1)        --------->MYB59                <<<<<<<<<ARR2      ---             <---------MYB52(2)     --------->LBD16   --------->ICU4   ----------->HVH21        <----  --------->LBD16    <---------At4g35610       <--------P   <---------ANAC58   <---------ATHB12 ----- ---------------->AGL2              ------>NtERF2<------MYB83       --------->ATHB12--------->ARR11(3)   aacccagaaacagcaacgaaggaagctccgaatagagccgcgagggcaagttggtaaatattgggttccatgagtgacacaatcaaaatctctgtgtgtg  16045900                                                                  <---------TOE2(3)                                                               --------->ALFIN1                                                             <------MYB83    <-----------HVH21                                        <------MYB46(1)   --------->TGA1a                                       <---------MYB46(3) <-----------RAV1(2)                                     --------->MYB55(2) -------At4g35610                                     *TSS  <---------AtMYB61 ------>At4g35610                                     <---------MYB46(3) -------ZAT14                                        <---------AtMYB61            <---------AHL20(2) ------>ZAT18                                        --------->ALFIN1           <-----------TBP -----ZAT18    <---------At4g35610     <---------ANAC58 <---------ANAC46   ----------->GT1 --------->MYB52(1) ---->ZAT18    --------->At4g35610     <---------ANAC58 --------->ALFIN1   <---------MYB46(3)  ------   tgctcaggtcagaactcagaagagagagtaagaccacgatttcgttttagtggcgatggtgggaggtcgaggttgagttgttatttataggcccaacgag  16046000                                                                               -------->HAHB4                                                                               --------->ATHB12                                                                               --------->YAB1                                                                              <---------YAB1        <---------ALFIN1                                                    --------->YAB1      ------>NtERF2                                                         <---------ICU4     --------->ANAC46                                                      <---------YAB1     --------->O2                                                          --------->ICU4     --------->bZIP60(2)                                                <---------YAB1     --------->ANAC58                                                   ----------->GT1     --------->ANAC58        <----------DOF2    <----------DOF2      --------->ALFIN1   <---------ALFIN1--------->DAG2   ---------->DOF2               --------->DAG2 ----->GT1       ---------->DOF2--------->YAB1 --------->TOE2(3) ---------->DOF2         <------NtERF2   tgaaaccacgccacttgcaaaaaggctgggtctttgataaaagttgaaacctttatggctaaaaactaaaagtgctgataattataggggcagagtttta  16046100                            <---------ICU4                                        <---------YAB1                            --------->ATHB51                                   <---------AHL20(2)                            -------->ATHB1                                <---------AHL20(2)                            <--------HAHB4                                --------->AHL20(2)               --------->TOE2(3)                                          <---------AHL20(1)        -              --------->ATHB12                                    --------->AHL20(2)              ---      <---------ICU4<---------ZAT6                                <---------AHL20(2)            <----      --------->AHL20(2)    --------->AHL20(2)                   --------->AHL20(2)             -----     <---------ATHB51       <---------AHL20(2)                   <---------AHL20(2)             -----     <---------AHL20(2)    <---------ATHB12           <-----------GT1 <---------AHL20(2) <----------DOF2     --------->AHL20(2)    <---------ATHB51          <-----------GT1 <---------AHL20(2) <---------ANAC58     <---------ATHB12      --------->ICU4  <---------DAG2        <---------AHL20(1)     <---------ANAC58   tagacaaataatttcttcattagtgttcaattatttcagacaccaatttttgtttttatctgtccaatttttttattttattttatgtttgcttttatac  16046200                                                                                                   --                                                                                      --------->ARR11(3)                                                                                      <---------ARR11(3)                                                                                    --------->HSFB2a(1)                                                                                    <---------HSFC1(2)  ----------->GT1                                                                   <---------HSFB2a(1) --------->DOF2                                    --------->YAB1           --------->ANAC58       -- -------->HVH21                                   <---------YAB1          --------->MYB52(1)  ------- -----ANAC55(2)                       --------->AHL20(2)    ----------->GT1 --------->ANAC58--------- ---->ANAC55(2)                      --------->AHL20(2)    <---------------AtSPL8   --------->HSFC1(2) ---->ANAC46         <---------AHL20(2)      <---------ICU4--------------->AtSPL8 ---------->DOF2 <--   gtgaaagtgaaaactcttcatattttttagtttgttcaaataaaaaatcattttcataaatattgtacaaaatataaaacggaagaaagttcttcattaa  16046300                                                 --------->YAB1 ------->TOE1(3)                           --------->ZAT6                          --------->ANAC58 ------->TOE2(3)                      --------->TOE1(3)              --------->ALFIN1 -->AHL20(2)                        <---------TOE1(3)              --------->ALFIN1--------->ANAC58 >TOE2(3)                           <---------TOE2(3)   <---------TOE2(3)   <----------DOF2 -------ICU4              --------->MYB52(1)    <---------YAB1     <-----------RAV1(1)   --------->ARR11(3)   acattaacacatcaaaatccctaagaaataagggaattaaggttaacactatcattttaagaaaactaggtgttgggcctttggcactaaatatcaagag  16046400                                                                                                    <                                                                                                   --                                                                                         <---------TOE2(3)                                                                                 ----------->GT1  <--                                                                 <-----------RAV1(1)     <---------TOE1(3)                <---------At4g35610                          <---------AHL20(2) --------->DAG2    ---                --------->At4g35610                         <---------AHL20(2) ---------->DOF2  <----           <---------ZAT6                               <----------DOF2   --------->ANAC58      -----          <---------TOE2(3)                        <----------DOF2        --------->ANAC58 <------ZmHOX2a(1)   aactatgggtctaatgttagctcgagtccagattacatggtctcagtctcatgcttttcttttttatttgtggcccaaggaaaaagtgattaaggaaatt  16046500  Previous    Next  AGI:  At2g38280.1    Description:  FAC1 (EMBRYONIC FACTOR1); AMP deaminase. Identical to AMP deaminase (AMPD) [Arabidopsis Thaliana] (GB:O80452;GB:Q56XX1;GB:Q93ZR9); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ69633.1); similar to hypothetical protein OsI_026471 [Oryza sativa (indica cultivar-group)] (GB:EAZ05239.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO50121.1); contains InterPro domain Adenosine/AMP deaminase; (InterPro:IPR001365); contains InterPro domain AMP deaminase; (InterPro:IPR006329); contains InterPro domain Adenosine/AMP deaminase active site; (InterPro:IPR006650) Range:  from: 16040526    to: 16045954    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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