Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   <---                                                                                                -----                                                                                                <----                                                       <---------ARR14(2)                  --------->AHL20(2)                                                       --------->ARR14(2)                  <---------AHL20(2)                                                       <-----------GT1                   <----------DOF2                                                       --------->ARR11(3)             <---------ARR11(3)                                             <---------YAB1                          <---------CCA1(2) ------>GLK1(2)                             <---------TOE2(3)                   <---------WRKY38(1) ------GLK1(2)                             <---------DOF5.7(2)       ------>ZmHOX2a(1)<---------ARR11(1) -->YAB1              ---------->DOF2      --------->MYB52(1)      ----------->RAV1(2)--------->ARR11(3) ---HVH21     <-----------HVH21      <---------YAB1   --------->CCA1(1)        --------->WRKY18(1)   aatctagaatactatttgtcaaatgaaagtgattacattatgagataacgatagaaatatccacatctctcctgatcaccagtcaacatatcttttatta  16025000                                ------>ZmHOX2a(1)                       --------->YAB1          <--------P         <---------YAB1                             <---------AHL20(2)         <---------MYB52(1) <-----------GT1                      <-----------GT1                   -- ------TOE2(3)             --------->YAB1              <---------ATHB12 --------->AHL20(2)         <- ---->MYB52(1)      --------->ANAC58        <-----------GT1    <---------AHL20(2)                  -- -------GT1         --------->ANAC58      --------->YAB1   <---------RVE1(1)      --------->YAB1   <-   acgaattgactggtagtttaagacgctaattatcctttgctctataataccatttcaatcgatattttaactaattatatactattagaaatgaaatgac  16025100                                                           --------->AHL20(2)                           --------->ARR11(3)            ----------->GT1            <----------DOF2<---------AHL20(2)           --------->DAG2                        -------       ---------->DOF2     --------->AHL20(1) --------->ANAC46                               --------   --------->At4g35610     <---------AHL20(1) --------->ANAC58                          ----------->GT1 ------->GLK1(2)      --------->AHL20(2)      --------->ANAC58                        ----------->GT1 ----------ARR10<-----------GT1        XXXXXXXXXXXXXXXXXXXX>MIR835-3P             --------->ANAC46 ------->ARR14(2)  <----------DOF2    ------------------------>ANAC81             --------->ANAC58 --------ARR14(2)---------->ID1     ---------->DOF2    ---------->DOF2            --------->ANAC58   aaatctgccgaaagcttttttctttttaatattttgtcaaaagaagacacacaaaaaaaaagtaaattgtattagaaaaaatccaagacagagaaaaaag  16025200                   <-----------RAV1(2)                  <------NtERF2                 ----------->RAV1(1)                 ------>NtERF2                --------->ETT(2)                <---------ETT(2)      --------->ETT(2)   ---------->DOF2    --------->REM1(2) <------ZmHOX2a(1)        ---------->DOF2 -->DAG2   <---------At4g35610             >>>>>>>>>TBF1     ---------->DOF2           <---------TOE1(2) -->DOF2   --------->At4g35610     --------->ALFIN1        <------ZmHOX2a(2)  <----------DOF2 <------   taaacgcgtagacagatggcgacaggagaaagagagagtggagaagaagaaaagaattgcgatcaaagaaaattagacttctttcttccaacgttttcac  16025300                                                                                                <----                                                                                                -----                                                                                         <----------DOF2                                                                                 --------->GLK1(2)                                                  <-----------GT1     <---------HSFC1(2)<---------ANAC58                                   --------->ANAC58                   --------->HSFC1(2)<---------ANAC58                        ---------->DOF2  <---------AHL20(1)        ---------->DOF2 <---------ICU4<---                      --------->ARR11(3) --------->AHL20(1)   --------->DAG2     <-----------ARR10---                  ---------->DOF2  --------->ANAC58     ------>ZmHOX2a(2)        --------->ARR11(3) -----GT1--------->ANAC46 ----------->GT1--------->ARR11(3)  ---------->DOF2     <---------ARR11(3) <   attacaaatacacaaaaaccaaaagataaagaaaaacaagaaatattttgtttttcgatctgaaaaagtgaaagcttcttcaaaatctttgctttagaga  16025400          <---------AHL20(2)   <------MYB83   ----------->GT1   <------MYB46(1)  --------->MYB46(2)  --------->MYB55(2)  <---------AtMYB61  <---------MYB46(3) <---------MYB55(1)                                                                               <-- -----ARR11(3)                                                                       --------->REM1(1) ---->ARR11(3)              <-----------TBP                                 --------->YAB1        --- ---ZmHOX2a(2)<-----------GT1<---------YAB1         <----------DOF2         <---------ICU4--------->ZAT2 --->ZmHOX2a(2)  <----------DOF2   *TSS <<<<<<<<<TBF1  --------->YAB1   --------->At4g35610       <-- ---------MYB52(1)     <---------AHL20(2)       <---------GLK1(2)    --------->TGA2(2)    --------->At4g35610   tcgtttggtgattttttttctttattttttttttatagtttcttcttcttgattctttcatatggatggacatcagcatcatcaccttcaccagcttcaa  16025500                                                                      <------MYB83                                                                <---------ANAC46                                                               <---------LBD16                                                             <---------MYB52(1)                                                             --------->ALFIN1                                                           <-----------RAV1(1)                                                           <---------MYB46(3)         --------->YAB1                <------NtERF2     <---------At4g35610       --------->ANAC58              --------->LBD16     --------->At4g35610      --------->ZAT14       --------->ANAC46              --------->RAP2.6(2) <---------ZAT2           <---------ZAT14       --------->ANAC58             <---------LBD16     --------->MYB52(2)       --------->ALFIN1     --------->MYB46(3)           ------->GAMYB        <--------P  --------->ARR14(2) ---------ARR10                   --------->ANAC46    <---------MYB52(1)    <<<<<<<<<<<<<<<<<LFY ------>ARR11(3)                 --------->MYB46(3)<---------LBD16 <---------ARR14(2)              -- -------ARR11(3)      --------->ANAC46--------->LBD16--------->LBD16  <------MYB46(1)         <------   tatctcaacaagcatcatcttcatactcaatcgcaaacgccggaaatagcctctccggtagctgttggggataggtttccacagtggagcgtcgaagaga  16025600                                                                  <----------DOF2                                                             <---------HSFC1(2)                                                             --------->HSFC1(2)                                             <----------ID1 --------->ANAC58                                     <----------DOF2 --------->ANAC58                               <------ZmHOX2a(2)     --------->ANAC46                              <---------ARR11(3)     --------->ANAC58--------->HSFB2a(2) -------->DOF2       =================HOX2a_HOX2a  --------->MYB52(1)<---------HSFB2a(2)           -- ----ID1             <------ZmHOX2a(1)  <---------AtLEC2    --------->ANAC58   --------->ZAT6 <------   caaaagagttgatagggataagaggagagctagatcaaactttcatggagacaaaacggaacaagcttctttgggaagttatctctaacaagatgagaga  16025700                                                 <-----------TGA1                                                 <-----------HVH21                                                --------->ANAC46                     --------->ZAT14            --------->O2    --------->ARR11(3)          --------->TOE2(1)                     --------->bZIP60(2)          --------->TOE1(1)   <-------PIF5  ------->TEIL        <---------ARR11(3)    <----------DOF2  <---------ZAT14       <---------ARR14(2) <---------TOE1(3)                <----- -------->DOF2    ----------->HVH21  --------->ALFIN1     <----------DOF2              <----------DOF2 ----ID1 ------>ZmHOX2a(1)    ------->PIF5 --------->ARR14(2) <---------TOE2(3)      <---------------   caaaagctttcctcgtagccctgaacagtgcaagtgcaagtggaagaacctcgtcactcgttttaaggtctattctctctctccctcttctttcattttg  16025800                                                                                               ------                                    --------->AHL20(2)                                        -------                         <---------ANAC46                                                    --------                         <---------ANAC58    --------->YAB1                                  <-------                   <---------ARR14(3)   <---------AHL20(2)                                   <-------          --------->ARR11(3)        <---------AHL20(2)                                      <--------         --------->YAB1  <---------ANAC58   --------->AHL20(2)            <---------YAB1 <----------DOF2      --------->YAB1     <---------AtLEC2--------->AHL20(2)            ------->TEIL     <---------ICU4 ----ANAC46        --------->ARR11(3)   --------->AHL20(2)  --------->ANAC58          --------->GLK1(2) ---------ANAC81   <---------ARR11(3)--------->AHL20(2)     --------->ANAC58          <---------ARR11(3)   tggatgttttataatcttggaggtcttgcatggaacaaataaataaataaaaatttgtaaccaagaaatattgaatcttatagtccataatctttccggg  16025900  Previous    Next  AGI:  At2g38250.1    Description:  DNA-binding protein-related. similar to transcription factor [Arabidopsis thaliana] (TAIR:AT5G01380.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO50136.1); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005) Range:  from: 16025435    to: 16026578    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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