Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           <---------AHL20(2)                                                         --------->AHL20(2)                                                    --------->ARR11(3)       <---------AHL20(2)--------->ATHB12           <---------ARR11(3)                 --------->ARR14(2)   --------->AHL20(2)    --------->YAB1             <---------AHL20(1)                 <---------ARR14(2)   <---------AHL20(2)   <---------YAB1              --------->AHL20(1)            --------->MYB52(1) ------->AHL20(2)     --------->YAB1           --------->AHL20(2)           <---------AHL20(2) -------YAB1       <----------DOF2             <---------AHL20(2)       <---------AHL20(2) ----YAB1 <---------ANAC55(2)                --------->YAB1            <---------YAB1  ------->TEIL -AHL20(2)--------->ANAC55(2) --------->At4g35610  <---------AHL20(2) <---------AHL20(2)   ----------   attatttatattatgtaatctcttttatgattagctaaactttttaaaaataaatatttttaatttgcatatttttatttaaaacaacgtatattgtgaa  16018100                                                         <---------AHL20(2)                                                        --------->AHL20(1)                          <---------ICU4                <---------AHL20(2)                         --------->AHL20(2)         --------->AHL20(2)                         <---------ATHB51           <---------AHL20(2)                         <---------AHL20(2)    --------->AHL20(1)                         --------->ICU4        <---------AHL20(1)                      <---------AHL20(2)       --------->AHL20(2)                     <---------AHL20(2)        <---------AHL20(2)              --------->ATHB12             <---------AHL20(2)              --------->ATHB51             --------->AHL20(2)              -------->ATHB1              --------->AHL20(1)             <---------ATHB51             --------->AHL20(2)             --------->ICU4               <---------AHL20(1)                   <---------ALFIN1             --------->AHL20(2)      --------->At5g28300--------->AHL20(2)  <-----------GT1             <---------AHL20(2)  <------ZmHOX2a(1)  <---------AHL20(1)   <---------GLK1(2)<----------     ----------->GT1 --------->AHL20(2)   <---------AHL20(2)     <----------DOF2       <---------AHL20(2) ---------->DOF2  --------->ATHB12  ----------->GT1<---------AHL20(2)    <---------ARR14(2)         - ->GT1    --------->AHL20(2)   <---------TOE2(3)   --------->AHL20(2)    --------->ARR14(2)  --------   atggaaagagtataaattattgattaaataattaaggactgtaatttattttattaaatttaatattcttttccaaattctccacatattttataccata  16018200                                                                                              <------                                                                                              -------                                                                                     <-----------TGA1                                                                                     <-----------HVH21                                                                                    --------->O2                                           <---------ARR14(2)                       --------->TGA1a                                           --------->ARR14(2)                       <---------O2                             <---------ARR14(2)                                     --------->bZIP60(2)                             --------->ARR14(2)                                     --------->ANAC46                     --------->YAB1--------->GLK1(2)                                --------->ANAC58                     --------->ANAC55(1) <---------MYB46(3)                         --------->ANAC58 -GT1    <---------ALFIN1   <---------GLK1(1)       <-----------HVH21             <---------ALFIN1 -- --------->DOF2      --------->ANAC46--------->ATHB12                        --------->At4g35610   <- ->TOE2(3)------->GAMYB     --------->GLK1(1)      --------->bZIP60(1)       <---------At4g35610-----   aaaaaagaacaacacccttacacacataacatatccgaatcagtggttcttcgacatcacacgatggtatagggaaatgagcttccacgtcaacaagata  16018300                                                                   <---------ANAC58          --------        <---------HSFB2a(2)                                       --------->HSFC1(2)        ---------        --------->HSFB2a(2)                            <-----------GT1                --------->ANAC58       <---------LBD16                 --------->ARR14(2)     <---------ANAC55(2)     --------->O2      <---------LBD16                  <---------ARR14(2)     --------->ANAC55(2)     --------->TGA1a ---ARR11(3)                           --------->ARR11(3)     --------->ANAC46 <---------ZAT14 -->ARR11(3)                     <----------ID1  <---------WRKY45 <---------HSFC1(2)  <---------TGA1a ------->YAB1                ---------->DOF2     <---------WRKY38(1)           <---------REM1(2) --------ICU4           <---------------AGL15    <---------WRKY12------->TEIL  --------->ZAT14   ---- ---->YAB1              --------------->AGL15   --------->WRKY18(1)<---------ANAC58   --------->ANAC58   ataatctcttcgggactatacatttacaacaaaaagaaacaaatcttgtggtcaaagtttccatacgtagcttctcttctctacactcacgtccaccaca  16018400                                      <----------DOF2                                    ------->TEIL<----------DOF2          <---------ZAT18                                 <---------ANAC55(2)              ----------->HVH21                                 --------->ANAC58               --------->ZAT2                                 --------->ANAC46               --------->At4g35610   <-------PIF5                  --------->ANAC58    ------------>CBF    <---------ZAT14   ------->PIF5                  --------->ANAC55(2)<-----------GT1      --------->ZAT14 ------>ZmHOX2a(1)       --------->SPL7      --------->ARR11(3) <---------At4g35610 ->AtMYB61    ------>ZmHOX2a(1) --------------->AtSPL8        --------->MYB46(3)                   -- >ANAC46  ------>ZmHOX2a(1)     --------------->AtSPL3      ----------->RAV1(1)               <------ ----->ARR14(2)        <-----------HVH21 <-----------GT1 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) <------   atcctcgtgctccttcctctaaacccgtccgattcacgtacttttactatcttttctcaatccaacagctcacagtccacaaacaaatttcaaatcgcgt  16018500                                                                           <---------ZAT14                                                                         <---------------AtSPL3                                                                        <------------------SPL14                                                                       <---------ANAC46                                                                       <---------DEAR3(1)                                                                       <---------DREB2C(2)                                                                      <---------ABI4(1)                                                                    --------->ALFIN1                                                                  <-----------RAV1(1)                                                                  --------->ALFIN1                         <---------ALFIN1                        --------->ALFIN1                        --------->ZAT14                      --------->LBD16  <---------DEAR3(1)  --------->AHL20(2)   <---------ALFIN1                    <---------LBD16--------->ALFIN1     <----- ----------->TBP   --------->At4g35610                    --------->MYB52(1) --------->SPL7  -------- ---->ZmHOX2a(1)   <---------At4g35610                   <---------ARR14(2)<---------SPL7   --------- ---ANAC58      ------>ZmHOX2a(1)                        --------->ARR14(2)--------->ZAT14  --------- ---ANAC58<---------ALFIN1        *TSS                  <------ZmHOX2a(1)<------NtERF2<------ZmHOX2a(1)   cctataaaatcccctctcctctgctccacactctctcaaaaccctagaaaaaatggcaggaaccggagttgtggcggtgtacggcgaaggagccatgacg  16018600                                                          <------NtERF2                                                        <---------DEAR3(1)                                                        <---------DREB2C(2)  <---------WRKY38(1)                                                        <---------ANAC46     <---------WRKY12                                                       <------NtERF2         <---------WRKY45                                                       <---------ABI4(1)    --------->DOF5.7(2)                                                   <---------ANAC58        <-----------HVH21                                                   <---------ANAC58       <---------bZIP60(1)                                               <---------HSFC1(2)         <---------ETT(2)                                               --------->HSFC1(2)--------->YAB1           <---------ZAT2    --------->MYB52(1)           <------MYB46(1)   <---------ANAC46       --------->bZIP60(1) --------->ANAC58        ----------->HVH21     <---------HSFB2a(1)    ------->TEIL       --------->ANAC58 --------->ANAC58       --------->LBD16      <---------GLK1(2)   <---------ICU4          --------->ANAC58 ----ANAC46            <---------ANAC46     --------->At4g35610 <---------YAB1   ------->GAMYB ->MYB52(1)           <---------LBD16       <---------At4g35610 --------->ICU4<---------DOF5.7(2) -->HVH21 --------->GLK1(1)      <------MYB83xxxxxxxxxxxxxxxx>smallRNA(s) <---------ANAC46--------->ZAT2 -->TGA1  <---------GLK1(1)---------->DOF2<-----------RAV1(2)   <---------ATHB12--------->ANAC46   gagacgaaacagaaatctcccttctccgtgaaagttggtctcgctcagatgcttcgtggcggtgtaatcatggatgtcgtcaacgcagagcaagctcgaa  16018700                     <------NtERF2                   --------->ANAC46                 <---------ATERF1(1)               --------->ATERF1(1)              <------NtERF2             <---------ANAC58                  ------>NtERF2             <---------ANAC46                  --------->LBD16             <---------ANAC46             <---------ANAC58                 --------->ANAC46             <---------ANAC58            <------NtERF2xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)               <---------ANAC58           <---------ATERF1(1)         <-------MYC3        <---------At4g35610        <---------At4g35610            <-------MYC2        xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        ----------->RAV1(2)            ------->MYC2--------->ARR14(2) --------->ALFIN1        --------->At4g35610          ------->TEIL  <---------MYB52(1) <-----------RAV1(1)        --------->ZAT2 <-----------HVH21--------->ALFIN1   --------->At4g35610                     <-        <---------ZAT2<---------ANAC46 ------->MYC3<---------ARR14(2)<------NtERF2         --------->LBD16       --------->GLK1(2)----------->HVH21    <---------LBD16       <---------DEAR3(1)   <------ZmHOX2a(2)   tcgctgaagaagctggcgcatgcgccgtgatggctcttgaacgtgttcccgccgatattcgagctcaaggcggtgttgctcgaatgagcgatccagagat  16018800                                                                                 --------->ANAC58                                                                             --------->HSFB2a(2)                                                                             ------>ZmHOX2a(1)                                                                             <---------HSFB2a(2)                                                                             --------->LBD16                                                                           ------>ZmHOX2a(2)                                                                          <------ZmHOX2a(2)                                                                         <---------ARR14(2)                                                                         <---------GLK1(2)                                                                         --------->ARR14(2)                                                                         --------->ARR11(3)                                ----------->HVH21                        <---------ARR11(3)                              --------->LBD16                            --------->AGP1                          --------->ARR14(2)                            <---------At4g35610                          --------->GLK1(2)                            ----------->ARR10                          <---------ARR14(2)                       <---------At4g35610                       <---------YAB1     --------->ANAC58         --------->At4g35610                    ----------->TGA1      --------->ANAC58      ---------->DOF2  --------->ANAC58               --------->ANAC46<-----------HVH21             <-------GAMYB--------->GLK1(2)        <- ---------->DOF2    ----------->HVH21   ---------->DOF2     <---------ANAC46<---------LBD16      <--- --------YAB1---------->DOF2<---------LBD16      <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  --------->MYB52(1)   gatcaaagaaatcaaaaacgccgtgacgattccggtgatggcgaaagctagaattggtcatttcgttgaagctcagatcctggaagcaatcggagttgat  16018900                                          --------->YAB1                                     <---------ARR11(3)                               <------NtERF2                              ------>NtERF2            <---------ZAT14  ----------->HVH21                                             --------->GLK1(2)  <---------DEAR3(1)         --------->At1g77200      --------->YAB1                      <---------GLK1(2)  <---------ETT(2)           --------->DEAR3(1)    ------->GAMYB                         ============  --------->DEAR3(1)        --------->DEAR3(2)    --------->MYB46(3)                     ============ --------ANAC46 --------->ARR11(3)   --------->ARR11(3)  <---------ICU4             <---------REM1(1) ------TGA2(2)  <---------ARR11(3)  --------->YAB1<---------MYB52(2)   <----------DOF2   <------ZmHOX2a(1)   tacgtcgacgagagtgaagttctcactctcgccgacgaagataatcacatcaacaaacataatttcaaaatcccttttgtttgtggatgtaggaatctcg  16019000  Previous    Next  AGI:  At2g38220.1    Description:  protein binding / zinc ion binding. similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT2G38195.1); similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT2G38195.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO21454.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 16014969    to: 16018010    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g38230.1    Description:  ATPDX1.1 (PYRIDOXINE BIOSYNTHESIS 1.1); protein heterodimerization. Identical to Pyridoxal biosynthesis protein PDX1.1 (PDX11) [Arabidopsis Thaliana] (GB:O80448); similar to PDX1 (PYRIDOXINE BIOSYNTHESIS 1.3), protein heterodimerization/ protein homodimerization [Arabidopsis thaliana] (TAIR:AT5G01410.1); similar to putative pyridoxine biosynthesis protein isoform A [Nicotiana tabacum] (GB:AAS92255.1); contains InterPro domain Ribulose-phosphate binding barrel; (InterPro:IPR011060); contains InterPro domain Vitamin B6 biosynthesis protein (InterPro:IPR001852) Range:  from: 16018534    to: 16019586    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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