Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                                 ----                                                                                               ------                                                                                           --------->At5g28300                                                           --------->ANAC58               <---------ANAC46                  <---------CCA1(2)                        <----------ID1 ----------->GT1 -----------              <-------GAMYB                                --------->ANAC58              <---------DEAR3(1)    <---------ZAT18                                   <---------ZAT6    --------->ALFIN1 <------NtERF2    --------->ZAT18                             --------->ALFIN1     --------->DAG2     ------>NtERF2 ->ALFIN1    ----------->GT1              <---------AHL20(2)        ---------->DOF2   --------->ATERF1(1)   gcattgtccaccagggtgttatatcccaattgaaatttgaaaatttaagtgtgtgagtgttacgacaaaaaaaagtgtgtgaattgtaggcgcggtgaaa  15941100                                              --------->DAG2                                             ---------->DOF2                                           <---------------AGL15                                           =================================MADS_MADS                                      <----------DOF2                                      ------>ZmHOX2a(1)                    <---------AHL20(2)        --------->ATHB12             --------->TOE2(3)            ----------->GT1       <---------YAB1             --------->ARR11(3)        --------->LBD16--------->AHL20(2) -------->GT1                     <---------ARR11(3)       <---------------AGL15 ----->DAG2                       --------->ARR14(2)       --------------->AGL15              <------ ---->DOF2        ----------->GT1 <---------ARR14(2)      <-----------------AG    --------->AHL20(2) >GT1  <---------TOE2(3)         <---------GLK1(1)        <---------LBD16 --------->AHL20(2) --------   aggtaaattaagattggaactagaaaaatagttgaatatcctttactaaaagttgtcaattccggttttagtaaaaaaaaattttaaaatagaaatttta  15941200                                           <---------YAB1                                         --------->GLK1(1)                                   --------->TOE2(2)                                   --------->TOE1(2)                        <-------MYC3                           <---------CCA1(2)                      <----------ID1 ---------->DOF2    <---------ARR14(2)   <---------GLK1(1)        ----------->GT1              ------ ---AHL20(2)        --------->ARR14(2)  --------->ARR11(3)      ---------->DOF2          --------->AHL20(2) ->AHL20(2)         <---------GLK1(2)   <---------ARR11(3)----------->GT1   ------->MYC3 <---------AHL20(2)   tccaaaagacttcaaacacacatattcgcatatataacataagatatcattttttgtaaacagttaaaaagaaaaacacatgtttttttttttaatttag  15941300                                                                              <-----------HVH21                                                                             <------MYB46(1)                                                                             <------MYB83  <---------ANAC58                   --------->MYB52(1) --------->AHL20(2)                    <---------AtMYB61<-------                --------->ANAC46    <---------DAG2           --------->ICU4 --------->MYB59<---------ANAC58              <-----------GT1       <----------DOF2   ----------->GT1  <---------TOE1(2)  <------MYB83      ----------->GT1            <---------ALFIN1   ---------->DOF2 <---------ANAC58      <---------MYB46(3) ----->GT1 <---------YAB1       <---------ZAT18  <---------YAB1     <---------ANAC58      <------MYB46(1)   aaaaaaacatgttattatacaaaacagagttttgcccacttttaatatgttatgaaaagaaaaatgattttcttgggtttggtcagagagattggttgtg  15941400                                                                  ------>NtERF2                                                                <------NtERF2                                                           --------->O2                                                           <---------bZIP60(1)                                                           --------->bZIP60(1)                                                           =========================================bZIP_DOF                                                           --------->bZIP60(2)                                                  --------->TOE2(3) <---------ALFIN1                                               <---------ALFIN1------>NtERF2                                              --------->MYB46(3)--------->ATERF1(1)                                             ------>MYB46(1)<---------ATERF1(1)                                             ========================MYC_MYB                                             ------>MYB83  <---------O2                                             -------->P    <---------bZIP60(2)                                            --------->MYB55(1) <---------RAP2.3(1)                                           --------->AtMYB61<-----------HVH21                                           <---------MYB111(2) <---------ATERF1(1)                                           <---------MYB59 --------->TGA1a              <---------ICU4               <---------MYB46(2) --------->DEAR3(1)           --------->YAB1                  --------->MYB46(3)--------->ATERF1(1)         --------->GLK1(2)                 <---------MYB111(1)<---------DEAR3(1)                ----- --------->ICU4                        --------->ETT(2)    <---------TGA1a               <----------DOF2 --MYB46(3)--------->TOE2(3)           <---------ETT(2)    <---------DEAR3(1)      <---------CCA1(2)   gtaagaatgggaatcttaattacaaagaattggattttgggtcgacctaccacctaaaacgacgtcgcctccatctctggtttccaaatctctttctcct  15941500                 --------->WRKY38(1)               <-------GAMYB              <---------ANAC58              <---------ANAC58          <---------ANAC58          <---------ANAC58  <----------DOF2--------->WRKY12<---------HSFB2a(2)  <---------DAG2<---------MYB52(1)    *TSS       ---------->DOF2 ->ZmHOX2a(1) <---------ANAC46   --------->HSFB2a(2)                          <------ZmHOX2a(1)   ---   ctccctttataagcttgcgttggccagtcgctcatctcgaaaacagagagaaaaagactaaaaacacagtttaagaagaaggagagatagagagagaaga  15941600                                            <---------ANAC58                                            <---------ANAC58                                            <---------ANAC46                 ----------->RAV1(2)                                       --------------->AGL15                 <---------At4g35610                                       <---------------AGL15                 --------->At4g35610                                       ==============================================================                                 <------MYB46(1)                       --------->ZAT2                                 <------MYB83        ------>ZmHOX2a(1) --------->At4g35610   --------->CCA1(2)            --------->MYB59 <---------CCA1(2)      <---------At4g35610  --------- ------->DOF2  --------->ALFIN1 <---------AtMYB61<-----------GT1       <---------ZAT2       ---------   gaaagatagagagggagatggggtctcatatggtttggtttctatttcttgtatccttcttctctgtgttcccagctccatctgagagcatggttcgcca  15941700                                                    --------->ATHB12                                                   <---------YAB1                                            ------>ZmHOX2a(2)                                           <------ZmHOX2a(2)                                          <-----------ARR10                                          --------->ARR11(3)                                          <---------ARR11(3)                    <---------AHL20(1)    <---------AGP1                                          ---                    --------->ARR11(3)    --------->ARR14(2)                                      <--                 --------->AHL20(2)       --------->AGP1                                          ---         <---------ANAC58                 <---------ARR14(2)                                      <--         <---------ANAC58       ----------------->AGL3                                            <--       <-----------GT1          ----------------->AGL2<---------WOX13(1)                        <---- =================================================MADS_MADS                         <---------DAG2--- >ANAC58<---------TOE2(3) <---------At5g28300    <---------At4g35610     --------->ANAC46    -------- >ANAC58<---------TOE1(3)<-----------GT1 <---------CCA1(2) <---------At4g35610      <----------DOF2   ctacaagtttaacgtgagtttatatattcacagttccatttacagatcttatgctgattgcagcatataacatagtcgcaacttaactttatccctgctt  15941800                                  <---------ZAT6 ---------->DOF2             <---------ANAC46             <----------DOF2 ------>ANAC58            <---------ANAC58               <---------ICU4 -------ANAC46            <---------ANAC58              --------->ICU4 ------>ANAC55(2)         <---------ANAC46         --------->ANAC55(2) -------ANAC55(2)    --------->MYB52(2)            <---------ANAC55(2)                    <---------ANAC55(2) -------ANAC55(1)    <-----------RAV1(1)         --------->YAB1                           <---------ANAC58 -----TGA2(2)      <---------ANAC58             <---------ATHB51         <----------DOF2  <---------ANAC58 ------>ANAC58     <---------ANAC58             <---------ATHB12      ------->TEIL   <---------ICU4 ->ZAT2    <-------TEIL<---------RAP2.6(2)      --------->ICU4  <---------AHL20(2)  --------->ICU4   acgtaaagaaacatacatattgtttgtggcttcgtagtggaacatatgcaattatgtaatctttatattatgagcctttacttacaaagattacttgaga  15941900                                                       --------->AHL20(2)                                                    <--------HAHB4                                  -                                                    --------->YAB1                       ------->TEIL                                                    <---------ICU4                       <-------TEIL                                                    --------->ATHB12                  <---------ANAC46                                         <---------TOE1(2)                            <---------ANAC58        --------->ZAT18      --------->YAB1 --------->DOF5.7(2)                       <---------ANAC58     <---------ANAC58<---------DAG2      <---------TOE2(2)     ---------->DOF2        <---------ANAC55(2)     <---------ANAC58<----------DOF2    ------>ZmHOX2a(1) <---------TOE2(3)           --------->ANAC55(2)    ------->TEIL  <-----------GT1      --------->TOE2(2)<---------AHL20(2)          <-----------GT1 -    <-------TEIL<-----------GT1   ------->TEIL     <---------ATHB12 >>>>>>>>>NAM ------->TEIL     ---   tttatgtacgtgtgctattttcacttttcaaacatgaatttcctacgtttacaatcatttaatgtaaaagggatgatataatgtatttacgtacatgtga  15942000  Previous    Next  AGI:  At2g38080.1    Description:  IRX12/LAC4 (laccase 4); copper ion binding / oxidoreductase. Identical to Laccase-4 precursor (IRX12) [Arabidopsis Thaliana] (GB:O80434;GB:Q940U7); similar to LAC10 (laccase 10), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G01190.1); similar to LAC16 (laccase 16), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G58910.1); similar to LAC11 (laccase 11), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G03260.1); similar to diphenol oxidase (GB:AAC49536.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15786.1); similar to unnamed protein product [Vitis vinifera] (GB:C Range:  from: 15941538    to: 15944694    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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