Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             --------->TOE2(3)                                                                                           <---------MYB59                                                                                        <-----------GT1                                                                                       --------->DOF5.7(2)                                                                                       <---------MYB52(1)                                                                                     --------->ANAC55(1)                                                                                     <---------ANAC55(2)                                                                                     --------->ANAC55(2)          --------->AHL20(2)      <------ZmHOX2a(1)  --------->YAB1                  --------->ANAC46          <---------AHL20(2)     <----------ID1     --------->ICU4               <---------GLK1(1)  < --------MYB52(1)     <---------AHL20(2)     <---------ZAT6           <---------ZAT2<-------TEIL    - -->KAN4(2)          --------->YAB1     --------->YAB1                <---------At4g35610  --------->TOE1(3)   cggtattcacatttaaactcgaataaaaatgtgtaaggacaaaaatagtcttaaatgatgagttttggttccagctaatttggaaatacgttaccttaca  15935300          xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)         ------------------------>ANAC81         xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)         xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)       xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)       ------------------------>ANAC81       xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)      xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                          <---------ANAC58     xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                         <-------TEIL     xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                               ---------->ID1           ------    xxxxxxxxxxxxxxxxxxx>smallRNA(si3)                             <---------ANAC46<---------ANAC46 ---------AHL20(2)            ----------->GT1                     <---------ANAC58----------->GT1 -------->AHL20(2)      ---------->DOF2                           <---------ANAC58<---------ANAC58   aattaaaaaaaaaaaaaaaaaaaaaaaaaagagtgtgaaaactcaaaatttgagtagacaaacaaatggcttgtcccttcaagttcgtgaaacaaaacaa  15935400                                                            ------->GAMYB                                                         --------->MYB52(1)                                                        ----------->HVH21                                                      <---------ANAC58                                                      <---------ANAC58                                                <---------STY1(1)                                                --------->STY1(1)                             <---------ZAT6    --------->TOE1(2)        --------->ANAC58        <----     <----------DOF2   <---------TOE2(2)       --------->TOE2(2)    <-----------GT1             <---- ---->DOF2     <-----------GT1         ----------->GT1<---------ANAC46  --------->ANAC58 <----------DOF2   agatggtctttggtttttaacttcataggtagtgatagtagaagtaaaacctaggggcgtaacagtcatttaacaagcgagagcccctagacttttttgc  15935500                                                            ------->GAMYB<---------TOE2(3)        --------->ZAT14              ------>MYB83          --------->ANAC58        <---------ZAT14              ------>MYB46(1)       --------->ANAC46            ----------->RAV1(2)        --------->At4g35610        ------->GAMYB<---------TOE2(3)        --------->ANAC58        <---------At4g35610       --------->DEAR3(2)       --------->ANAC58  <---------KAN4(2) -----ANAC58                     --------->MYB52(1)      --------->MYB52(1)<------ZmHOX2a(1) -----ANAC58            <---------ZAT6         ---------->DOF2           --------->ANAC58----------->HVH21   ttactctgtctgcagtagtagtagtagtgttgtactaccgactcactgctaaagttatacaacggaactagcgataaggaattttcaaaacctgacccct  15935600                                  --------->YAB1                                  <---------ARR14(2)                           <----------DOF2                                   ---------->ID1                          <---------DAG2             ------->GAMYB   *TSS<----------DOF2           --               <---------YAB1  <----------DOF2     -------->P  <-----------GT1<-----------GT1     ---        <----------DOF2<---------ALFIN1           <-----------GT1   <----------DOF2    <---------MYB52(1)   <-----------GT1   <-----------GT1            <---------ATHB12 <-----------GT1  --------->ARR14(2)   catattttctctttattctaatttcacacctttcttttataatctcactaatcaaccctctctattttctctttcctttgtcactatccgttgagaaccc  15935700                                                                                             --------                                                                                            <--------                                                                                            ---------                                                                                          --------->LBD16                                                                                      --------->ARR14(2)                                                                                      ------->TEIL                                                                                      <---------ARR14(2)                                                                               <----------DOF2   ---- ------->RAP2.6(3)                               <---------------------WRI1    ====================== ------>MYB52(1)                              ------>ZmHOX2a(2)       ----------------------->TaNAC69(2)   aaacggctctctctcttgtctgactctctctctctctctctctctcgatcggtcgaaattttctctgtaactctcttctctctttacgaatcccgatatg  15935800                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                -----                                                                                              -------                                                                                              ------>NtERF2                                                                                              <------                                                                                              -------                                                                                             ------->GAMYB                                                                                             --------                                                                                            ---------                                                                                          --------->ARR14(2)                                                                                          <---------ARR14(2)                                                                                       <---------ALFIN1                                                                                       ----------->RAV1(1)                                                                                      <------NtERF2                                                                                     <---------ATERF1(1)                                                                                     ------>NtERF2---                                                                                     <-----------HVH21                                                                                     --------->ABI4(1)                                                                                    --------->DEAR3(1)                                                                                    --------->ATERF1(2)                                                                                    --------->RAP2.3(2)                                                                                    --------->RAP2.6(2)                                                                                    --------->RAP2.3(3)                                                                                    --------->DREB2C(2)                                                                                    --------->ANAC58                                                                                    --------->RRTF1(2)                                                                                    --------->RRTF1(3)        <-------GAMYB                                                               --------->ANAC46       --------->MYB55(2)                                                          --------->RAP2.3(1)       <------MYB83                                                                --------->ERF1<---       <---------MYB46(3)                                                          --------->ORA47(2)       <------MYB46(1)                                                             --------->ATERF1(1)      <---------AtMYB61                                                            --------->RAP2.6(1)      --------->ALFIN1                 --------->ANAC58                            --------->RRTF1(1)     <---------MYB52(1)                --------->ANAC58                           --------->LBD16<---  <---------O2                        ------->GAMYB                               <---------ATERF1(1)  <---------TGA1a                    --------->MYB46(3)                           --------->ABI4(1)  ===============================================MYC_MYB                          --------->At4g35610  ==============MYC_MYB              <---------MYB111(2)                          <---------At4g35610  ============================================MYC_MYB                            --------->ANAC46----  ==============================================MYC_MYB                      --------->At4g35610-----  --------->O2              --------->AtLEC2                     <---------At4g35610<---------ATERF1(2)  --------->TGA1a      --------->KAN4(2) ------->GAMYB           --------->At4g35610--------->ANAC58- <---------LBD16       --------->YAB1<---------MYB55(2)        <-----------RAV1(2)------>NtERF2------ ->CCA1(2)  <---------TOE1(3)   --------->ANAC46             <-----------HVH21   --------->DEAR3(1)-- -ARR14(2)  <---------TOE2(3)   --------->ANAC58             <-----------TGA1<---------At4g35610----- >ARR14(2)  <---------YAB1  ------>ZmHOX2a(1)  --------->At4g35610       <----------DOF2 <---------ALFIN1 ----->ANAC46     <---------YAB1--------->ANAC58           --------->At4g35610   <---------ALFIN1---- ===========bZIP_DOF  <---------KAN4(1)-------->P          <---------At4g35610  <---------LBD16------   agccacgggtggttatggttatgaataatcctgcaaacaacaacccagtagcagcgtcttcagcgtcagccgtagctttagctccgccgccacatccgcc  15935900        --------->ORA47(1)       --------->DEAR3(1)    <---------ALFIN1 -------ALFIN1 ----NtERF2 ------>RAP2.3(1) ------At4g35610 ----->ABI4(1) ----->LBD16 ---->RAP2.3(2) -->LBD16 ---ATERF1(1) -->At4g35610 ->ANAC46 >MYB46(3) ------>ATERF1(1) ------ATERF1(1) ---NtERF2  ------>ZmHOX2a(1)                                                <---------At5g28300 -->NtERF2  =======================HOX2a_HOX2a            <-----------GT1   <---------WRKY18(1) ---->DEAR3(1)                      --------->LBD16   <---------ARR14(2)   --------->WRKY45 ----->NtERF2                     <---------LBD16     --------->ARR14(2)   --------->WRKY12 >>>>>>>ZML2 --->RRTF1(1)                <-----------HVH21        <---------GLK1(2)    --------->WRKY38(1)  ----- ------->DEAR3(1)           ------>ZmHOX2a(2)       --------->LBD16        ----------->HVH21--------- ---->RRTF1(2)          ----------->HVH21         <---------LBD16        <----------DOF2    <-------- ----->At4g35610      =============HOX2a_HOX2a  <-----------GT1      <---------CCA1(2)      --------- --->RAP2.3(1)        ------>ZmHOX2a(1)       <-----------HVH21      ---------->ID1         <--------   gcagcctcaccgtccttctacttcctgtgatcgtcacccggatgagcgtttcaccggattttgcccttcttgtctctttgaccgtctctctgttctagac  15936000                         <---------ANAC58                         <---------ANAC58                         <---------ANAC46                      <---------MYB52(1)                      <------NtERF2                       --------->RAP2.3(1)                      --------->ATERF1(1)                ------>NtERF2                     <---------ATERF1(1)                 --------->LBD16   ----------->GT1   ------>NtERF2                       <---------At4g35610   --------->LBD16   <-----------HVH21        --------->DEAR3(1)                                    - <---------LBD16    <---------DEAR3(1)     --------->AtMYB61        --------->ANAC58               <- ---->ANAC46        --------->DEAR3(1)    --------->MYB46(3)        --------->ANAC58              <-- >HSFC1(1)        ------->GAMYB           <---------ABI4(2)--------->DEAR3(1)                    <--- -HSFC1(1)       --------->ANAC46         <---------MYB55(2)------>NtERF2                     <------ >HSFB2a(2)      --------->DEAR3(1)  --------->ANAC46   --------->ANAC46  --------->YAB1     ------>ZmHOX2a(1) -HSFB2a(2)   --------->MYB46(3)   --------------------->WRI1     ---------->DOF2         ------>ZmHOX2a(1)   atcaccggaaaaaacaacaacgccgtcgcgtcttcttctaagaaaccaccgtcttcttccgccgctcttaaagcaatcttcaaaccctcttcctcctccg  15936100             --------->HSFC1(2)             <---------HSFC1(2)             <---------HSFB2a(1)             --------->HSFB2a(1)                                                            ------>ZmHOX2a(1)            <---------ARR14(2)                                                             --------->TOE1(2)            --------->ARR14(2)                                                            ------>ZmHOX2a(2)          --------->LBD16                                                                 ===========         <---------HSFB2a(2)                                                             <------ZmHOX2a(2)         --------->ANAC46                                                                ============         --------->HSFB2a(2)                                                             --------->GLK1(2)        <---------LBD16                                                                 --------->ARR14(3)        <---------HSFB2a(2)                                                             --------->ARR11(3)        --------->HSFB2a(2)                                                             <---------ARR14(3) -------->MYB52(2)      --------->ANAC58               <----------DOF2        ----------->RAV1(1)<--- ------TEIL <-----------ARR10         --------->At4g35610            <---------ANAC58   <---------ARR14(2) -------MYB52(1)      <------ZmHOX2a(1)                <---------DAG2<---------ANAC46   --------->ARR14(2) ------MYB52(1) <---------LBD16       <---------At4g35610            <---------ANAC58   <---------ARR11(3) ---LBD16--------->LBD16--------->ANAC58   ---------->DOF2          <-------TEIL      ----------->ARR10   gttcgttcttcccggaacttcggaggacgaaatcgttttcagcatcaaaggctgaagctttttctctaggtgcgtttgagccacagagaagatcctgtga  15936200  Previous    Next  AGI:  At2g38070.1    Description:  similar to glycine-rich protein [Arabidopsis thaliana] (TAIR:AT3G09070.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15781.1); contains InterPro domain Protein of unknown function DUF740 (InterPro:IPR008004) Range:  from: 15935669    to: 15937872    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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