Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ----                                                                                               <-----                                                                                             --------                                                                                             <-------                     ---------->DOF2               --------->ANAC58                  --------->CCA1(2)                    <------ZmHOX2a(1)              --------->ANAC58             ---------->DOF2======                 <-----------RAV1(2)             --------->MYB52(1)          <------ZmHOX2a(1)<------ZmHOX2a(2)                <------ZmHOX2a(2)                <---------DOF5.7(2)         ========================HOX2a_HOX2a              <------ZmHOX2a(1)         <---------YAB1               --------->MYB52(1)     <------ZmHOX2a(1)   aatacaaaattttgaaggatcaggaaagatggaacgagacttacgaatgggtaacgaaacaggggtcttgataacgggaggataaagagacggaggatca  15912100                                                <---------LBD16                                              <---------ARR14(2)                                              --------->ARR14(2)                                             <---------At4g35610                                             <---------ZAT2                                             --------->ZAT2                      <---------GLK1(1)     <---------ATERF1(1)                  --------->ANAC58          ------>NtERF2                  --------->ANAC55(2)    ------>NtERF2                  <---------ANAC55(2)   --------->ANAC58                  --------->ANAC58      --------->ANAC46                 --------->SPL7         <---------bZIP60(1)                 --------->SPL1(2)    <---------ATERF1(1)             <---------------AtSPL8  <---------bZIP60(2)      <---------At4g35610            <---------bZIP60(1)      --------->At4g35610         ----------->HVH21     ----------->RAV1(1)    ----------->HVH21--------->At4g35610 ----->At4g35610--------->SPL1(1) ----------->TGA1------>NtERF2         --------->At4g35610 ------RAV1(2) <---------SPL7  <---------DEAR3(1) --------->LBD16 <---------ANAC58 ->ARR14(2)  <---------------AtSPL3  <---------O2<---------DEAR3(1)     <---------At4g35610 --ARR14(2)  --------------->AtSPL3  --------->bZIP60(1)          <---------ANAC58 ================RAV  --------->GLK1(1) --------->ANAC58          <---------ANAC46   gaagaaacagcagaagcggtacggatttcttcgacggtgacgacgccagctccggcgaaagatgggttacgagcagatgagctatttctctgcaggtatt  15912200                                                                                            ---------                                                                                           --------->ARR11(3)                                                                                           --------->ARR14(2)                                                                               <------ZmHOX2a(1)                                                                              --------->ZAT14                  <---------ARR14(2)                                    ------->TEIL       <---------ARR14(2)          --------->MYB46(3)                                         <---------YAB1        <---------ARR11(3)         ------>MYB46(1)                                          <---------AHL20(2)    <------------         -------->P <-------TEIL        ------>ZmHOX2a(1)        --------->AHL20(2) ---------->DOF2         ------>MYB83                  --------->TOE2(3)  --------->ANAC58    <---------ZAT18    ------->TEIL  --------->ARR14(2)  ------>ZmHOX2a(2)   --------->ANAC58  --------->At4g35610   ggtatgaatccaacctctcggattcattcgttttctctgatcctaaatgagcatttcgacaagacaattttatgaatcagaggactcaaaggagatatac  15912300                                          <---------ANAC58  ------->TEIL                                 <XXXXXXXXXXXXXXXXXXXXMIR162A/B                            <---------AtMYB61                                ---------->DOF2             --------->GLK1(2)       ---------->DOF2                             --------->TOE1(3)           <---------ANAC55(2)      --------->MYB46(3)   <------ZmHOX2a(1)         --------->TOE2(3)           <---------YAB1         <-----------GT1 >CCA1(2)                 <-----------GT1 <---------ANAC58 <---------GLK1(2)  <---------ATHB12 ---------WRI1 <-------TEIL ----------->RAV1(2)          --------->ANAC55(2)  <---------MYB52(2)   acagaggagatgatatgttcgtctgaatttacctgaaagcagaggcttatccatggattacgaatctctctgtcttcccaattaaccaaagtagtggttt  15912400                                            --------->LBD16                       <-----------HVH21   <---------ANAC58                    <-----------RAV1(2)    <---------ANAC58            <------ZmHOX2a(1)     ------>ZmHOX2a(2)                               --------->ANAC58            =============================HOX2a_HOX2a                 *TSS         --------->ANAC58           ----------->GT1      --------->ARR11(3)         <---------YAB1    --------->ANAC58          <---------TOE2(3)     <---------ARR11(3)        <-----------GT1    --------->ANAC58   ttcttagagagtaaggaaaaacccaggtcaattcgatcttcttctccgtgcgagagaaattttcattacaagaagaaacaagacaagaattcgagttttt  15912500                                               ------->MYC3                                               ------->PIF5                                               <-------MYC4                                               ------->MYC4                                               <-------MYC3                 ------>MYB83                                               ------->MYC2                 ------>MYB46(1)                <------ZmHOX2a(2)              <-------PIF5               <---------MYB55(2)               --------->AGP1                  <-------MYC2               --------->MYB46(3)   <-----               --------->ARR11(3)             <---------ANAC55(2)<---------CCA1(1)          <--------               --------->ARR14(2)             <---------O2       <---------RVE1(1)         <-------GAMYB               <---------ARR14(2)             <--------ABF1     <---------ARR11(3)        <---------MYB46(3)              --------->At4g35610             <---------ANAC46  --------->ARR14(2)      <---------ANAC58              <---------At4g35610             --------->O2      <---------ARR14(2)      <---------ANAC58             ----------->ARR10         <------------CBF         --------->ARR11(3)   <---------WOX13(1)          <-----------HVH21    <-----------ARR10               <------ZmHOX2a(1)   --------->ATHB12        <---------DEAR3(2)     --------->ARR14(2)            <---------TOE1(3)    <---------AHL20(2)        <---------MYB46(3)     <---------ARR14(2) ----------->HVH21    <-----------GT1 <---------MYB46(3)       --------->ETT(1)      --------->LBD16  <---------TGA1a<---------ANAC46     <---------YAB1<----     <-----------HVH21     <---------LBD16    --------->TGA1a<---------TOE2(3)    --------->AHL20(2)<   cttatcgggtcgggtcagatccagatagaaccgggtcttcgtattgccacgtgtgaaacggttgaggatattttcacccactatataattggttgttata  15912600                                        <----------DOF2                                      <<<<<<<<<<AtSR1                                      --------->LBD16                                     <---------ANAC46                                     <---------ANAC58                                --------->ATHB51      <---------At4g35610       -------->HAHB4      --------->At4g35610       <---------ICU4     --------->ANAC58           --------->ATHB12     --------->ANAC58           <--------ATHB1 <---------ANAC55(2)            <------------ATHB5 --------->ANAC58              <---------AHL20(2) --------->ANAC55(2)           --------->ICU4 --------->ANAC58              <---------ATHB51 ----YAB1  ---------->DOF2----------->GT1   <---------AtMYB61 -YAB1----------->GT1 <---------O2   <---------ANAC58       <------ZmHOX2a(1)                  ------ -----------AtSPL3 <-------TEIL--------->AHL20(2)         <---------TOE2(3)                    <----- -------TEIL      --------->CCA1(2) <---------LBD16       <---------TOE1(3)           --------->ZAT6   agtacgtaagctaaaaagagattcacgagggaaataattgcgcgttttggtccagtgtttaaggagagagagcaggtatatgaaaataacacttacacat  15912700                             --------->RAP2.6(3)                            --------->MYB52(1)                            <---------ARR14(2)                            --------->ARR14(2)                        <------NtERF2                       --------->LBD16                      --------->ANAC46     <----------DOF2                     <---------LBD16    <---------ARR11(3)                   <-------MYC3         --------->GLK1(2)                                           <   <----------DOF2 ------->MYC3         --------->ARR11(3)                                         <- ->MYC3       <-----------HVH21   ----------->RAV1(1) <---------MYB46(3)                           <- --MYC3      ------>ZmHOX2a(1) --------->ANAC46      <-------TEIL   <---------ARR11(3)            ---   ggatgcttttaagtcctatcacatgcggcatatcggcaacaaaatctttttcatgttcgttcatttccaagttattcaatatgaacgattccaaaatttt  15912800           --------->YAB1     <---------ARR11(3)               <------MYB46(1)          <---------YAB1      --------->ARR11(3)               <------MYB83            <---------ZAT14   --------->ATHB12       ---------->DOF2                  <-----------RAV1(1)         <---------ZAT18 <---------MYB52(1)  <---------LBD16             ------->TEIL<---------MYB52(1)        --------->ZAT18 -------GAMYB    --------->WRKY38(1)           ------->GAMYB<-------GAMYB              --------->ZAT14 --------MYB46(3)--------->WRKY12             --------->MYB46(3)                      --------->ALFIN1 --------ANAC46  ----------->HVH21          --------->MYB52(1)<---------AtMYB61    <------ZmHOX2a(1) ------->ID1 <---------YAB1 ----------->ARR10 <---------MYB52(2)             ------->TEIL   gtcgttgatttgattatagttgacctggaaaagatactatagatactaacgaacatcatctctgttggtctagtacatgtatttaggagtggacacaaaa  15912900                                                                                   ----------->GT1                                                                                 <---------WOX13(1)                                                                               --------->ATHB51                                                                               --------->ATHB12                    <---------ZAT14                                            <--------ATHB1                    --------->ZAT18                                           <---------ATHB51                    --------->ZAT14                                    <---------ICU4                <-----------RAV1(1)                                   <---------YAB1           <----------DOF2     --------->ARR14(2)                     --------->ICU4           <---------DAG2      <---------ARR14(2)      <---------CCA1(2) <---------TOE2(3)--------->ANAC46        <-----------GT1      --------->LBD16       <---------ANAC46 --------->YAB1 <---------MYB46(3)    <------------------------ANAC81      <---------CCA1(2)         <-------TEIL<---------ICU4  ------   <---------AHL20(2)      <---------LBD16--------->ARR11(3)   <---------YAB1 --------->ICU4 <-------   tggattttttttacttttttggtgctctgtccggattcaacatatatctagttttgtgtatcattttgattcattatggaataattggttacaagttaca  15913000  Previous    Next  AGI:  At2g38000.1    Description:  chaperone protein dnaJ-related. similar to unnamed protein product [Vitis vinifera] (GB:CAO15764.1); contains InterPro domain Heat shock protein DnaJ, cysteine-rich region; (InterPro:IPR001305) Range:  from: 15910203    to: 15912469    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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