Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <---------ALFIN1    <------NtERF2   ------>NtERF2 ------MYB46(1) ------MYB83 <---------ALFIN1 ---------MYB46(3)                                                                --------->ANAC58 --------AtMYB61                          <----------DOF2 <---------AHL20(2)      --------->ANAC58 --------MYB46(3)                  <-----------GT1 ----------->GT1           <---------ZAT6 -------MYB52(1)                 <----------DOF2  --------->MYB59        --------->ZAT14 -------RAV1(1)         --------------->AtSPL8   <-----------RAV1(2)     <---------ZAT14   gttggtgccagactcccacttccatgttcgaacttctttacattctttaagtcaggttattttttggattccaactgtagtgacaatccatacattccat  15907300              <---------YAB1            --------->YAB1     ------>MYB83     ------>MYB46(1)                                                        <---------AHL20(2)   <---------MYB111(2)                                                      --------->AHL20(2) <-----   <---------MYB46(2)              --------->At4g35610           <---------ANAC58           <--------   <---------MYB111(1)    <---------YAB1         ---------->DOF2 <---------ANAC46       ----------->GT1   <---------MYB59 <-----------GT1 ----------->GT1               <---------ANAC58 <---------YAB1   ggctaccaaacttatcttgattcacattatgctaagaagctaaaacatacaaaaagaaccgaaattgtcgtgagtttttttaatacgatagggtattaat  15907400                                                       --------->MYB52(2)                                                   ----------->GT1                                                   <---------ZAT6                                                  <------MYB83                                            <---------LBD16                                            <---------ANAC46                                           <---------LBD16                                        <---------ARR14(2)                                        <-----------ARR10                                        --------->ARR14(2)                             --------->AHL20(1)   <------MYB46(1)                             --------->AHL20(2) <--------P                                 <---------TOE1(3)  --------->TOE2(3)          <---------AHL20(2)<---------MYB52(1)      >>>>>>>>>CBP60g     <---------TOE2(3) ----TOE2(3)     --------->ARR11(3)     --------->GLK1(2)              >>>>>>>>>SARD1   <---------AHL20(2) -YAB1         <---------AtMYB61       <---------CCA1(2)        ----------->GT1   --------->TOE2(3)   gtattcttaacaacgttatggtcttgagaaataaaatatgcaaatctcgggtagggttatttggattagtgaaatttgggattttcttaatttaaggcta  15907500                                <---------AHL20(2)                                <---------ICU4               <---------AHL20(2)                               --------->AHL20(2)   <-------GAMYB --------------->AtSPL8                          --------->At5g28300      --------->MYB52(2)                          <-------GAMYB            <---------MYB46(3)   --------->ICU4          <----                         ----------->GT1       --------->ALFIN1   <---------------AtSPL8        -----                     <---------YAB1        <---------At5g28300  <-----------RAV1(1)        --------->DAG2                     ----------->HVH21    --------->MYB52(1)--------->AHL20(2)            ---------->DOF2   aaaactatgaaatttagagatttatgacagttaataaatacgaataacggtgttcgttgcaattttatgtggtacttatttgtttttaaaaaaaaagttt  15907600                                <---------AHL20(2)                              <---------AHL20(2)                             --------->ARR11(3)                             <---------ARR11(3)                             --------->AHL20(2)                             <---------AHL20(2)                             <---------AHL20(1)                             --------->AHL20(1)             <---------GLK1(1)                            --------->AHL20(2)  <---------TOE2(3)                        --------->AHL20(2)    ---------->DOF2                      <---------AHL20(2) -----------AtSPL8    ----------->GT1   ----------->GT1     --------->GLK1(1) <---------MYB52(1)   -- ---------->AtSPL8   ----------->GT1  ---------->DOF2     <------ZmHOX2a(1)  <-------GAMYB        ---   agtactaaattgttcgatttcgaaagttaaatatatttttgaaagttataaaggaagaaaggatttcttagcaaatttccgttatttaagttggagagaa  15907700                                                                                   ----------->ARR10                                                                                <------NtERF2                                                                               <---------HSFB2a(2)                                                                               --------->LBD16                                                                               ------>NtERF2                                                                               --------->HSFB2a(2)                                                                              <---------ANAC46                                                                              <---------LBD16                                       <---------YAB1                        --------->ATERF1(1)                                      <-----------GT1                        <---------LBD16                                 <---------AHL20(1)                          <------NtERF2                            >>>>>>>>>MYB98                                  <---------RAP2.3(1)             --------->RVE1(1)   --------->AHL20(2)                         ------>NtERF2             *TSS       --------->TOE1(3)                                  <---------DEAR3(1) --------->GT1          --------->TOE2(3)        ------>ZmHOX2a(1)        --------->ZAT14 ------>DAG2 --------->CCA1(1)   <---------AHL20(2)<---------ALFIN1       <---------ZAT14   aaggtttaactcaaaatatcgcaaaaccctaacaaaaaattttcattcttcctccactctctcaattccaaaacactgcgccgggaagacatggacaccg  15907800                                                            <---------At5g28300                                              <----------DOF2                         <---------TOE1(3)                                             <---------ANAC58          <---------At4g35610                                             <---------ANAC58          ----------->RAV1(2)<-------TEIL                                   --------->GLK1(1)      <---------MYB55(2)          <---------TOE2(3)                               <---------ANAC46           --------->MYB46(3)   ------>ZmHOX2a(1)-----                               --------->ETT(1)           <---------ATHB12<---------At4g35610   <----                 <-----------GT1   <---------GLK1(1)    --------->WOX13(1)--------->At4g35610--------   agatggagacagaacaaatataccaggtcgatgtcggaaatctcttggctttcaatcccaatcaccgcttcccatctgctccttcttcaaggttcgtcct  15907900                                           <---------ANAC58                                           <---------ANAC58                                           <---------ANAC46                                          <------NtERF2                                         ------>NtERF2                                         <---------DEAR3(2)                                         <---------RAP2.3(1)                                        <---------ANAC46                                        --------->DEAR3(1)                                        <---------RAP2.6(2)                                        <---------RAP2.3(2)                                        <---------DEAR3(1)                                       --------->DREB2C(1)                                       --------->RAP2.3(1)                                       --------->DEAR4(2)                                       --------->ATERF1(1)                                       <------NtERF2                                       <---------DREB2C(1)                                       <---------At4g35610                                      <---------RAP2.3(1)                                      <---------DEAR4(2)                                      <---------RRTF1(1)                                      ------>NtERF2                                      <---------ERF1                                      <---------ORA47(2)                                      <---------ATERF1(1)                                      <---------RAP2.6(1)                                     <---------DEAR3(1)                                     <---------ATERF1(2)                                     <---------ANAC46<---------AHL20(2)                                     --------->ATERF1(2)                                     <---------RRTF1(2)                                     <---------RAP2.3(3)                                     <---------RAP2.3(2)                                     <---------RAP2.6(2)                                     <---------DREB2C(2)         --------->YAB1              <---------RRTF1(3)      <---------CCA1(2)   --------->ARR11(3)        <---------AHL20(1) ->ZmHOX2a(1)  <---------ANAC58     --------->ATERF1(1)            ------>ZmHOX2a(1) ------DOF2    <---------ANAC58   <---------DEAR3(1)--------->AHL20(1)       --------->ATHB12 -->ID1  --------->TOE2(3)<---------ARR11(3)     --------->AHL20(2)<---------YAB1   ttcccgtcttatcttaagcttgtgttgagttcttcgatggcggcggcttgattatatatttgtttaatcctgatttagttgatttggaatgggtttatct  15908000                                        ---------->DOF2                                     --------->ANAC55(2)            <---------AHL20(2)                                     <---------ANAC55(2)<---------ANAC58     ---------->DOF2                               <---------TOE2(3)        <---------ANAC58 <-----------GT1                              --------->YAB1     ------->TEIL       --------->AHL20(2)   tcatacttgttgtaaacttttcaattgctgaataatgttaagtaaagtatgaattttttcgtaagagtgatttattaacaaaagctctgtttaagtacaa  15908100                                                                                            ---------                                                                                    --------->ANAC55(2)                                                    --------->ARR11(3)              <---------ANAC58                                                    <---------ARR11(3)              <---------ANAC46                                                    --------->AHL20(1)        --------->DAG2---------                                                   --------->RVE1(1)        ---------->DOF2 ---------                                            ----------->GT1     --------->WRKY12    <---------ANAC58    <---------------AGL15      <---------LBD16     --------->CCA1(1)    <---------ATHB12<----------DOF2    --------------->AGL15  --------->WOX13(1)----------->GT1    --------->WRKY38(1) <---------ANAC55(1)   gagtttcttcaattagtttctctaagcatcaatctcggaagtacaagagttaaatatcttaagacgatgacccaatcgaaaaggttgcgtctttaagcaa  15908200  Previous    Next  AGI:  At2g37990.1    Description:  ribosome biogenesis regulatory protein (RRS1) family protein. Identical to Ribosome biogenesis regulatory protein homolog [Arabidopsis Thaliana] (GB:Q9SH88;GB:Q56WN3;GB:Q8LA50); similar to unnamed protein product [Vitis vinifera] (GB:CAO39739.1); contains InterPro domain Ribosomal biogenesis regulatory protein; (InterPro:IPR007023) Range:  from: 15907713    to: 15910296    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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