Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          =============                                                                                        ------>ZmHOX2a(2)                                                                                        =============                                                                                       ==============                                                                                       ==============                                                                                       ==============                                                                                       --------->ARR14(1)                                                                                       --------->CCA1(2)                                                                                      --------->AGP1<                                                                                      --------->ARR14(2)                                                                                      --------->ARR11(3)                             <---------At4g35610                       ==============================                         --------->ANAC46              <---------YAB1  ------>ZmHOX2a(2)=============                        <---------LBD16    <---------ARR11(1)          ==============================                       --------->MYB52(1)  --------->ARR14(2)    --------->YAB1       <---------ARR14(2)                ------->GAMYB--------->At4g35610     --------->YAB1--------->ICU4     <---------ARR11(3)           --------->DOF5.7(2)          <---------MYB59--------->ICU4--------->ARR11(3)<------ZmHOX2a(2)       --------->MYB52(1)--------->ANAC55(2) --------->ATHB12   --------->ICU4       <---------GLK1(1) --------HVH21  --------->TOE2(3) <---------------AtSPL3        <---------ZAT6       --------->GLK1(1) ---->DEAR3(1) <------------AtMYB77   --------->MYB52(1)  <---------YAB1 --------->ALFIN1        <--- --ALFIN1  --------->At5g28300   ---------->DOF2 <---------MYB46(3)<---------YAB1   ----------->ARR10   gtcgaagagaaacggtaaccgtagtttacggagcagaaagtaccgaatcgttggatgatgatggtagtgatgatcgtggtggtaatgagatccgctagag  15904300                                    --------->AtLEC2                                 <------NtERF2                                ------>NtERF2                               --------->RAP2.3(3)                               --------->RAP2.3(2)                               --------->DREB2C(2)                               --------->RRTF1(2)                               --------->RRTF1(3)                               <---------ALFIN1                               --------->RAP2.6(2)                               --------->DEAR3(1)                              --------->ERF1            <------ZmHOX2a(1) --------->DEAR4(2)          <---------TOE2(3)   --------->RRTF1(1)    --------------->AGL15     --------->RAP2.6(1)    <---------------AGL15    ------>NtERF2   ----------------->AGL1    <---------ATERF1(1)   ----------------->AGL3   --------->ANAC46 <---------ARR14(2)        ------->MYC2 ==================HOX2a_HOX2a--------->RAP2.3(1)                      <---------bZIP60(2) ======HOX2a_HOX2a         <-------MYC2                             ----------->HVH21 ==================HOX2a_HOX2a--------->ORA47(2)                  --------->ANAC55(2) ======HOX2a_HOX2a         ------->MYC3                           ----------->GT1 ===HOX2a_HOX2a           --------->ANAC58                        --------->At4g35610       <------MYB46(1) ------ZmHOX2a(1)         --------->ANAC58                        <---------At4g35610       <------MYB83 ======HOX2a_HOX2a        --------->ANAC46                        <---------ANAC55(2)      <---------AtMYB61 ===HOX2a_HOX2a<------MYB83<-------MYC3                         <-----------RAV1(2)     <-----------RAV1(1) ===HOX2a_HOX2a<------MYB46(1)<------NtERF2           <---------MYB52(1)          --------->WRKY38(1) ---ZmHOX2a(1) ----------->GT1--------->ATERF1(1)    <-----------HVH21 --------->CCA1(2)--------->ALFIN1   gaggaaccaattgaggaaggtgaagaacacgcgccgccttgcaaacctgtttctccgtcgtctatatcaggtgatatggcgatgttgactgtgttggtat  15904400                                                                 ------->MYC3                                                                <---------ANAC58                                                                <---------ANAC58                                                              <---------TGA1a                                                              --------->O2                                                              <---------O2                                                              <---------ANAC46                                                              --------->TGA1a                                                              ======================MYC_MYB                                                              =======================================                                                             <------NtERF2                                                             --------->ATERF1(1)                                                            ------>NtERF2                                                            <---------ATERF1(1)                                                           <---------DEAR3(1)                                                           --------->DEAR3(1)                                                           ----------->HVH21                                                        --------->ANAC58   <--------P                                                        --------->ANAC58  <---------SPL7                                                      <---------ALFIN1   <---------MYB46(3)                                                     <---------REM1(2)   --------->MYB55(2)                                               <---------GLK1(1)<---------ANAC46                 ----                                              --------->ARR14(2)<---------O2                    -----                                  ----------->GT1   <-----------HVH21 <---------MYB46(3)       <-----                                  <---------MYB46(3)------>NtERF2<-------MYC3<------MYB83<------MYB83                                 <---------AtMYB61 --------->ANAC46  <---------AtMYB61  <---------MYB46(3)                        <---------SPL7        --------->GLK1(2)------>NtERF2 <------MYB46(1)  -------                       <---------MYB46(3)===============================bZIP_DOF <---------DEAR3(1)                    <------MYB46(1)      ---------->DOF2--------->ANAC46<---------AtMYB61<------MYB46(1)                    <------MYB83 --------->ALFIN1  ----------->HVH21 <---------DEAR3(1)<---------WOX13(1)            <---------ARR14(2) <---------ZAT2<---------GLK1(2)=======================================            --------->ARR14(2)<---------DEAR3(1)   <---------ETT(1)  --------->ALFIN1--------->ATHB12           <------ZmHOX2a(1)  <---------AtMYB61<---------HSFB2a(1)--------->ALFIN1  <---------YAB1   tgcagtaatcggaggaaatggaaggtcgttcggaggtggtttctaaagaatctccgacacggcgacgcgtggtggtggtaggggctgtgattggtgcaac  15904500                      <---------DDF1                      ------>NtERF2                     --------->DEAR4(1)                     --------->DEAR3(1)                     --------->At1g77200                     --------->RRTF1(3)                     --------->RAP2.6(2)                     --------->RRTF1(2)                     ----------->HVH21                     <---------ETT(1)                     --------->RAP2.3(2)                     --------->RAP2.3(3)                     --------->DREB2C(2)                    <------NtERF2                    --------->ATERF1(1)                    --------->RAP2.3(1)                    --------->ERF1                    --------->RRTF1(1)                    --------->ORA47(2)                   ------>NtERF2  <------NtERF2                   --------->At4g35610                   <------NtERF2 <---------ATERF1(1)                   <---------ATERF1(1)                   <---------At4g35610                  <---------DEAR3(1)                  --------->RAP2.3(2)                  --------->DEAR3(1)                  <---------ATERF1(2)                  --------->ATERF1(2)                  --------->RAP2.6(2)                 --------->SPL7  ------>NtERF2                 --------->ATERF1(1)                 --------->DEAR3(2)                 --------->RAP2.3(1)               <---------ATERF1(1)----------->RAV1(2)               --------->ANAC46 --------->RAP2.3(3)               <---------SPL7  --------->RAP2.3(1)              ------->PIF5     --------->ATERF1(1)              --------->DEAR3(1)--------->DEAR3(1)       <---------ANAC58        --------->ORA47(2)       <---------ANAC58        --------->ERF1                   <----------ID1 ---------->DOF2<---------ATERF1(1)                          --------->DAG2 ===========bZIP_DOF--------->DEAR3(2)                      ---------->DOF2 --->GAMYB   --------->ATERF1(1)--------->RAP2.3(2)     --------->HSFB2a(2) ---->MYB46(3)<-------PIF5    <---------ATERF1(1)       <---------HSFB2a(2)         <---------WOX13(1) ----At4g35610--------->MYB46(3)--------->ATERF1(2)     --------->HSFC1(1)        <------ZmHOX2a(1) -->MYB52(1) --------->DEAR3(2)--------->DEAR4(2) --------->WOX13(1)    ----------->GT1   <---------AHL20(2) ====MYC_MYB <---------At4g35610<---------ATERF1(2)     <---------HSFC1(1)    ---------->DOF2   ggccaaagggcttgcaccggccgccgacatctcgccgcctgagaaacaaaatcaatctctagaaaagcgccaaattgaaaaaaaggattgattttttttt  15904600                                              <------MYB46(1)                                              <------MYB83                                             <---------AtMYB61                           <---------YAB1                                           <-------GAMYB                                 <---------TOE1(3)                  <---------TOE2(3)       <---------MYB46(3)               <---------MYB46(3)                  --------->DAG2          --------->MYB111(2)        --------->MYB52(2)  <---------TOE2(3)                ---------->DOF2           --------->MYB55(2)       <--------P<---------MYB52(1)         ----------->GT1                  --------->MYB52(2)      <-------GAMYB--------->MYB59       ----------->GT1                    <-----------RAV1(1)    ----------->GT1        *TSS        <   tttgagagagagagaaaaaaaaggttgtttttttttttgtttgtttgttggtgtttttggaattagagggttagtagtggttaggcatgttatggttttt  15904700                                    <-------TEIL                                   --------->CCA1(2)                                   --------->ARR14(1)                                   --------->GLK1(2)                                  --------->ARR14(2)                                  <---------ARR14(2)                 <-----------GT1          --------->ARR14(2)      --------->ARR11(1)            <----------DOF2          <---------ARR14(2)      <---------GLK1(2)      <------NtERF2       <---------DEAR3(1)       ----------->ARR10       <-----------HVH21     --------->ALFIN1         <---------MYB52(1)       <---------DEAR3(1)                  <---------    --------->ALFIN1       <------NtERF2               <---------ANAC58                 <---------ANAC58    --------->ATERF1(1)   ------>NtERF2                <---------ANAC46                 <---------ANAC46   --------->ALFIN1      --------->DEAR3(1)            <---------ANAC58      <xxxxxxxxxxxxxxxxsmallRNA(i)  <---------ANAC46      --------->MYB46(3)  <---------TOE1(3) --------->HSFC1(2)        <---------ANAC58 ---------LBD16         --------->ATERF1(1) <---------TOE2(3) <---------HSFC1(2)     <---------MYB52(1)   tttggggggggggttctgtattagtagccaccgtgagattcggcttaaggctgagaggcgtcgaagctttttttctaatctctctctgtttcgttttatg  15904800                                                                                          <--------P                                                                                          <---------WOX13(1)                                                                                         <-------GAMYB                                                                                 <----------DOF2    <                                                                                 ====================                                                                                 ====================                                                                          --------->AHL20(2)    <----                                                                          <---------AHL20(2)    -----                     <---------------AtSPL8                    --------->ARR14(2)<---------------AGL15                 --------->AHL20(2)                            <---------ARR14(2)--------------->AGL15 -DOF2         --------->AHL20(2)       <---------MYB52(1)<---------ANAC46--------->YAB1<---------MYB46(3)   tctgtgtttgtgtaaatttttatatagtacagatttatgtctgtttgtgtttatggccttgtggggattttgctaattatatgctttttttggttgattt  15904900                              ----------------->AG                              <-----------------AGL3                              <-----------------AG                              ----------------->AGL1                              ----------------->AGL2                              ----------------->AGL3                     --------------->AtSPL8                     <---------------AtSPL8        --------->AHL20(1)                    <---------YAB1                 <---------ARR11(3)                  --------->ATHB12                 --------->ARR11(3)                  <---------AHL20(2)               <---------AHL20(1)                 <---------AHL20(2)   ----------->GT1             <---------AHL20(2)<---------------AGL15                                 <---------LBD16             --------->AHL20(2)--------------->AGL15                               --------->ARR11(3)            <---------WOX13(1)<-----------------AGL2                               <---------ARR14(2)       <----------DOF2        <-----------------AGL1                               --------->ARR14(2) -----------GT1  --------->AHL20(2)  <---------------AtSPL8                       <---------GLK1(1) ==============================================MADS_MADS                          <---------CCA1(2) ===============================================MADS_MADS                     ----------->GT1 -----AHL20(2)--------->AHL20(2)  --------->ARR14(2)                      <---------ARR14(2) ---->AHL20(2)<---------AHL20(2)  <---------ARR14(2)  <-----------GT1     --------->ARR14(2)       <-   tattacattctttgatttatttattagtacttcccaaatatggtacaatagaatattttcaagtttaagcatctcatatactgtatatctggattttaaa  15905000                                                 --------->ANAC46                          --------->DAG2                                    --------->ANAC58                                     ---------->DOF2                                    --------->ANAC58                                 --------->ANAC58                          --------->ICU4         --------->ANAC58                    --------->ANAC58            --------->YAB1<---------YAB1         --------->ANAC58             --------->DAG2        ----------->GT1 --------->YAB1       --------->YAB1  <---------ARR14(2)    --------->MYB52(1)   <---------ANAC46    <---------ZAT6   <---------ATHB12     --------->ARR14(2)   <---------ZAT14 ---------DOF2   --------->ZAT6     --------->ANAC46   ----------->HVH21     ---------->DOF2        <   actttgggtatagataataacactagtcataaatgttcacgaatcattcataagccagtgacatatttgctcaatcggagaaagtgaacggaaaaggtta  15905100          ----------->HVH21        <---------At4g35610       <---------DEAR3(1)           --------->At4g35610      <---------ORA47(1)            <---------At4g35610 --------->ARR14(2)               ---------->CDC5 <---------ARR14(2)   --------->ANAC58                                                             <- ------ZmHOX2a(1)     --------->ANAC58          <-------TEIL      ----------->GT1 <---------YAB1   --   caggataggccggtgatggaagagaggcaatctccctcagcgtccataggttcacacagagatagagagtgtatattgttttctacgattagagcaacta  15905200  Previous    Next  AGI:  At2g37980.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G01100.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G54100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15763.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72579.1); contains InterPro domain Protein of unknown function DUF246, plant (InterPro:IPR004348) Range:  from: 15901135    to: 15904688    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version