Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                    =                                                                                             ------>ZmHOX2a(2)                                                                                             ========                                                                                            =========                                                                                            ---------                                                                                            <------ZmHOX2a(2)                                                                                           <---------ARR14(2)                                                                                           <---------ARR11(3)                                                                                           --------->ARR14(2)                                                                                           --------->ARR11(3)                                                                                           --------->AGP1                                                                                           <---------AGP1                                                                             ========================                                                             <---------TOE2(3)<---------TOE1(2)   ---                                                      <---------ANAC58       ======================HOX2a_HOX2a             <----------DOF2                          <---------ANAC58       ------>ZmHOX2a(1)    <-- --------ANAC58                                   --------->GLK1(1)   <---------GLK1(2)  --------->MYB59 --------ANAC58     <----------DOF2    ----------->ARR10--------->AtLEC2     =======================HOX2a_HOX2a --GT1 <----------DOF2       ------>ZmHOX2a(2)    <---------GLK1(1) <---------YAB1       ----------->ARR10   ttcgttttcctttctctttcttctttggtgatcccattgctaaaatttgctgatttccttgcaaaggtttctgattctcctaagttttagttagatctgt  15879800              <---------HSFB2a(2)              --------->HSFB2a(2)        --------->ARR11(3)        <---------ARR11(3)        <---------ARR14(2)        --------->ARR14(2)       --------->GLK1(1)       <---------GLK1(1) ----->ZmHOX2a(2) ==================HOX2a_HOX2a ==================HOX2a_HOX2a ==================HOX2a_HOX2a >CCA1(2)   ------>ZmHOX2a(1) ======HOX2a_HOX2a                                                 <---------------AtSPL3 ------>ARR11(3)                                                   <---------------AtSPL8  <---------ATHB12 -------ARR11(3)    --------->TOE2(3)         <----------DOF2<---------ANAC46 ----------->GT1   gatctactgatatcctctagagcctcaattcttcaagagactgtttagcttttgctaagaattgagtatgaagtactgaattgtgtaattccaatgaatt  15879900                                                                                  <------MYB83                                                                               --------->CCA1(2)                                                                               --------->ARR14(1)                                                              <---------MYB46(3)  <------MYB46(1)                                                          --------->DAG2      <---------ARR14(2)              <---------YAB1       <---------YAB1       ---------->DOF2       --------->ARR11(1)          <---------AHL20(2)   <----------DOF2       <---------ZAT6         <---------TOE2(3)      <---------RVE1(1)<----------DOF2           <--------P  --------->ALFIN1 --------->ARR11(3)   <---------ZAT6      <---------DAG2          <---------MYB46(3)           ----------->ARR10   ctctagtgatatttttatgcttaaactttatgtctttgttattgcagagtggttagtgtaaaggtggatgaagaaactaagatttggtttagtccctgaa  15880000                                    <---------YAB1                                  <---------ICU4                            ----------->GT1                          <---------ANAC58                          <---------ANAC58                         <---------At4g35610                        --------->MYB111(2)                       <--------P -------->HAHB4                <----------DOF2   <---------AHL20(2)               <---------ANAC46  <---------ATHB51                                   --------->CCA1(2)               <---------ANAC58  --------->ICU4                        <---------TOE1(3)               <---------ANAC58  <---------YAB1                        <---------TOE2(3)          --------->ATHB12<---------ANAC46                             <---------TOE1(2)   <---------ZAT14  <---------TOE1(3)                      ---------->DOF2       <---------YAB1   --------->ZAT14  <---------TOE2(3)     --------->ZAT6----------->RAV1(1)<-------TEIL       <------   tgcagtatagagtcattgctttgaggttgctggtaattattctaccactatggtgaggcaacaaagagcctctaaggttcatgaagatagacatcccttg  15880100                                                                                       <----------CDC5                                                                                      --------->At4g35610                                                                                      <---------At4g35610                                                                                     <---------DEAR3(1)                                                                                  --------->DAG2                                                                                 ---------->DOF2                                                                                --------->ARR14(2)                                                                                ---------->DOF2                                                 --------->ARR11(3)         <---------LBD16                                                 --------->ARR14(2)         --------->At4g35610                                                 <---------ARR14(2)         --------->LBD16                                                 <---------ARR11(3)         <---------At4g35610                                           --------------------->WRI1      <---------ANAC46                                         ------>NtERF2                    <---------LBD16                                         --------->LBD16               --------->GLK1(1)                                        --------->ANAC58               <---------GLK1(1)              --------->At4g35610       --------->ANAC58              <---------ARR14(2)              <---------ZAT2            --------->ANAC46              <---------ARR11(3)              <---------At4g35610      --------->MYB46(3)             --------->ARR14(2)        --------->ICU4                 ------>ZmHOX2a(2)              --------->ARR11(3)      ---------->DOF2                <---------ARR14(2)               <-----------ARR10<------NtERF2  <---------TOE2(3)     --------->YAB1<------ZmHOX2a(2)        ---------->DOF2  <---------ARR14(2)  <---------TOE1(3)<---------REM1(1) --------->ARR14(2)      --------->ANAC58 --------->LBD16 ---MYB52(1)  --------->ZAT2   <-----------RAV1(1)           --------->ANAC58--------->ANAC46  *TSS   tgtcaaggtaaagatgagctggtgaagcatgatatgttggatccgccaaggtatcttcgaagaacgaaagaagatttccgcggaaaggcgctgagttttg  15880200                                                                                   <---------ZAT2                                                                                   --------->ZAT2                                                                           --------->ANAC46                                                                          <---------LBD16                                                              --------->ALFIN1     <---------At4g35610                                                            <---------ANAC58  --------->ARR14(2)                                                            <---------ANAC46  <---------ARR14(2)                                            <---------At4g35610          <---------ANAC46     <------                                            --------->At4g35610  <---------REM1(1) --------->At4g35610                                 --------->ARR14(2)         <---------ANAC58--------->LBD16  --------                                 <---------ARR14(2)  ---------->DOF2    <-----------------------TaNAC69(2)                                <------ZmHOX2a(1)   --------->TOE1(2) --------->ARR14(2)     <-------                               ----------->GT1     --------->MYB46(3) <---------ARR14(2)    <-------TEIL   gggttttggattggaaacagtttgagaaatggaaggatactaatgcagatggaaccaaagaagcgtgttgtagttacgcggaaacagctgcaagttcgtt  15880300                                           <-------TEIL                                          --------->ARR14(1)                                         --------->ARR11(1)                                         <---------ARR14(2)                               --------->ANAC58                                         --------->ARR14(2)                               --------->ANAC58                                       ----------->ARR10           --------->YAB1    <------ZmHOX2a(2) -GAMYB              ----------->GT1   <-------TEIL            =============================HOX2a_HOX2a ->MYB52(2)       --------->ALFIN1    <--------P               <------ZmHOX2a(1)  --------->MYB59   < --MYB46(3)--------->ETT(2)  --------->ATHB12          --------->MYB46(3)       <---------MYB52(1)  -   ggagctagatttatcgaccggtgttgtcaaaagattggaggtagattcgaagtctcaacaaatgaggaatcagagtttctcagttagatcacaagcattt  15880400              <---------YAB1            <---------At4g35610          ----------->GT1     --------->MYB52(1)               ---------->DOF2   <-------TEIL                    <------ZmHOX2a(2)                          ---------->DOF2 ---------At4g35610            --------->ALFIN1                           <---------At4g35610    <--- -------->At4g35610      <---------YAB1 --------->DAG2                    --------->At4g35610   <----   tcagatgcaacggatgctgatacagtgatgagagtggatcaaaagggaaaacgagagcatcaacttctgagtatgaagcagaaagaactaagtcatgcct  15880500                                                                                                  <--              ------->TEIL                                                                    ------- --------->At4g35610                                                                          <------ --------->ZAT2           <------ZmHOX2a(2)                           <---------ANAC46        ------- <---------ZAT2         <------ZmHOX2a(1)                             <---------REM1(1)     <-------- <---------At4g35610  --------->LBD16                  --------->ANAC58        <---------ANAC58   <-- -------CDC5 <---------CCA1(2)                         --------->ANAC58        <---------ANAC58<----- -----At4g35610      <---------LBD16        --------->At4g35610    --------->ICU4  <---------ZAT6 <--   ctgagcttagctcgtgtatctctccaggatcagagaaatttagaacagttgaatgtcaagacagaaggcatgatgtagaaggcgagtgttcaagtccggt  15880600                                                                                        ------>MYB46(1)                                                                                        --------->MYB52(1)                                                                                        ------>MYB83                                                                                       --------->MYB55(1)                                                                                       ----------->HVH21                                                                                      <---------MYB46(2)                                                                                      <---------MYB111(1)                                                                                      <---------MYB59                                                                                      <---------MYB111(2)                                                                                     --------->ANAC55(2)                                                                                     <---------At4g35610                                                                               ------>ZmHOX2a(2)                                                                              <------ZmHOX2a(2)                                                                             --------->ARR14(2)          --------->ANAC58                                                   <---------ARR14(2) -------ANAC58                                                               --------->ARR11(3) -->At4g35610                                                               --------->GLK1(1)   <---- ---At4g35610                                                          ---------->DOF2<---------MYB52(2) -->LBD16 --------->ANAC58             <------ZmHOX2a(2)          ---------->DOF2------>ZmHOX2a(1) -LBD16 ---------->DOF2         <---------MYB46(3)           <-----------------AGL1  --------->ANAC46 -------ANAC58                <---------ANAC58               --------->AtLEC2<---------ARR11(3)<----- ----MYB52(1)                 <---------ANAC58           <-----------HVH21  <---------GLK1(1) <------ -------ANAC46              <---------YAB1         --------->ANAC46--------->DAG2<-----------HVH21   gagtgtgatggaaagaaaccaagagaaaccatgcttgttggatcaaaacattcccacaatgtcatccaaaaaggaaagagatccttcacctaacaggcgg  15880700  Previous    Next  AGI:  At2g37930.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G01030.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G01030.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO15744.1) Range:  from: 15880195    to: 15882050    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version