Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                ----------->RAV1(1)              ------->GAMYB        --------->YAB1        --------->ANAC55(2) --------->YAB1                                               <---------TGA1a        --------->ANAC46  --------->ANAC58                --------->MYB46(3)             <---------O2       <-------TEIL       --------->ANAC58   <----------DOF2                             --------->TGA1a --------->ZAT18     <-------TEIL         --------->ARR11(3)   --------->KAN4(2)         --------->O2 <---------ZAT18  --------->At4g35610     <---------ARR11(3)  <---------KAN4(1)  <-----------HVH21 -------->ALFIN1  <---------At4g35610  --------->DAG2  ------>ZmHOX2a(1)<---------ARR11(3) --->DOF2    --------->MYB46(3)       ---------->DOF2 <---------MYB59   --------->ARR11(3)   gagtgtgcatacataaccacagatgcacaagcataactaataaagttctttctagtcctaaccaatattcccaagacctctatggtcagacacttgagag  15812300                                                                                                  ---                                       <---------AHL20(1)                                         ---                                ------>ZmHOX2a(1)                                                 <--                                --------->HSFB2a(2)                                              ----                            --------->GLK1(2)                                                  ------                            <---------ARR14(2)                                                -------                            --------->ARR14(2)                                               <-------                            ------->TEIL                                                     --------                         --------->ANAC46                                                    <-------                      --------->TOE1(2)<---------AHL20(2)                                    <------NtERF2                      --------->TOE2(2)--------->AHL20(1)                            ----------->RAV1(2)                     --------->YAB1    --------->AHL20(2)               --------->TOE2(3)    --------                  --------->YAB1<---------HSFB2a(2)   <-----------GT1 <---------AHL20(2)    <--------    ----------->GT1 <---------YAB1    --------->AHL20(2)       ----------->GT1      ------->TEIL<----   aaaaacttgtaaaaatccaagtatcatacgaatcctagaaataaatttctgcaaaataacatgttttgttaattcattaatcgttgtacctggccagcgc  15812400     --------->ZAT18     <---------ZAT18     <---------ZAT14     --------->ZAT14                          ------>ZmHOX2a(1) ------>HSFB2a(2)                            --------->TOE2(3) --->NtERF2                           ===============HOX2a_HOX2a -------HSFB2a(2)                     <------ZmHOX2a(2) ----->DEAR3(1)                   --------->LBD16 >NtERF2                          <---------TOE1(2) -->DEAR3(1)                      <---------TOE2(2)          --------->TOE2(3) --At4g35610                     <---------LBD16           <-----------ARR10 ->ATERF1(1)                    <---------LBD16         --------->MYB46(3) --ABI4(2)                ===========================HOX2a_HOX2a ->At4g35610              =================HOX2a_HOX2a----------->RAV1(1) -ATERF1(1)               ------>ZmHOX2a(2)<-----------------AGL1 --------->MYB46(3)  ---------->DOF2 --NtERF2          --------->ALFIN1 <------ZmHOX2a(1)<----------ID1                ----------->RAV1(1)   cgagaagtgaactagggggaagtggtgatcgattcccaggatcagttcctaaatggcaacaaatctcaacaaatgagcgagagagccacaaagagggaac  15812500                                                            <---------ANAC58                                                            <---------ANAC46                                                            <---------ANAC58                                                        <-----------RAV1(2)                      <---                                                        ==================RAV         <---------MYB52(1)                                                       --------->At4g35610           --------->LBD16                                            --------->TOE2(3)                       --------->DEAR3(1)           --------->TOE1(3)                --------->TOE1(3) --------->ALFIN1      --------->DREB2C(2)           <---------MYB59                 ===============================RAV       --------->ANAC46           --------->TOE2(3)               ----------->RAV1(2)<-----------RAV1(1)  <---------LBD16  -      <---------MYB52(2)            <------ZmHOX2a(2)  <---------At4g35610--------->MYB46(3)     <---   ataaacaaacaaacctaaattcaaaacttgaagaagcgatcaaaaacctgaaacttgagcaggcgtgttgctctcaacaactctcaccggcattttcttc  15812600                                            ------>MYB46(1)                                       <---------PCF2                                  <---------ANAC58                                  <---------ANAC58                              ------>ZmHOX2a(2)                             <------ZmHOX2a(2)                            <---------ARR11(3)                                                <------MYB46(1)           <---------ANAC58 --------->ARR11(3)                                                <------MYB83           <---------ANAC58 <---------ARR14(2)                                               --------       <----------DOF2      --------->ARR14(2)                                             <---------MYB52(1)    ------>ZmHOX2a(1)  --------->ARR14(2)   ------>MYB83                                   <---------ARR14(2)    ================================HOX2a_HOX2a                                            --------->ARR14(2)    =================================HOX2a_HOX2a      --------->ALFIN1                 <---------LBD16 ------ANAC58          --------->GLK1(2)  --------->AtMYB61                           <-------------- -------->ARR14(2)     <---------ARR14(2) <---------MYB59        --------->YAB1   --------->YAB1 ------ANAC58   ----------->GT1<----------DOF2     *TSS         <---------ATHB12 <---------YAB1     -   cgtctcctcctttccgtctgataaaaatccgatctttggtgcgaccaaatcaaatcgtggagcctaatcaaaaaccacatctcatcatacccggttcggt  15812700                                                            ----------->GT1                                                       <---------ANAC58                            --      ------->GAMYB                                    <---------ANAC58                         -----   --------->MYB52(1)                                  <---------ANAC46                         ----- ->MYB59                 --------->MYB52(1) <---------MYB52(1)     <-----------GT1           *TSS<--- ---AGL1        --------->AHL20(2)         --------->LBD16  <---------ANAC46      <----------DOF2<--- -------->TOE2(3)      ---------->DOF2   <---------LBD16<----------DOF2          <---------DAG2------   tttcttaaccgaatcaaattatacataaaacggattaggcttctccggttttcgactgcgttttgtataaaacctctcaaaaaccttttcttctctcccc  15812800                                   <---------ARR14(2)                                   --------->ARR14(2)                               <-----------------AGL1                               ----------------->AGL1                              ------>NtERF2                             --------->DEAR3(1)                            <------NtERF2                            --------->ATERF1(1)                            --------->RAP2.3(1)                           --------->ABI4(1)                           ------>NtERF2                           <---------ATERF1(1)                          --------->RRTF1(3)                          --------->DREB2C(2)                          <---------ALFIN1                          --------->RRTF1(2)                          --------->RAP2.3(3)                          --------->RAP2.3(2)                          --------->DEAR3(1)                          <---------ATERF1(2)                          --------->ATERF1(2)                          --------->RAP2.6(2)                         <------NtERF2                         --------->RAP2.6(1)                         --------->RRTF1(1)                         --------->ERF1                         --------->DEAR4(2)                         --------->ORA47(2)                         --------->RAP2.3(1)                        <---------RAP2.3(1)                        <---------DEAR4(2)                        <---------DREB2C(1)                       --------->ATERF1(2)                       <---------DEAR3(1)                       <---------ATERF1(2)                       --------->DEAR3(1)                       --------->RAP2.3(2)                       --------->ANAC46                      --------->DEAR4(2)                      --------->ATERF1(1)        ==================HOX2a_HOX2a        ------>ZmHOX2a(2)--------->ATERF1(1)       ===================HOX2a_HOX2a       <------ZmHOX2a(2)--------->ABI4(1)      <---------ARR14(2)------>NtERF2      <-----------ARR10--------->RAP2.3(3)                                           <-----------ARR10      <---------ARR11(3)<---------ATERF1(1)                                          <---------ARR11(3)      --------->ARR11(3)--------->At4g35610                                          --------->ARR11(3)      --------->ARR14(2)<---------At4g35610                                          --------->GLK1(2) ------->SPL7         --------->RAP2.3(1)            <-----------GT1              <---------AHL20(2) ---->ANAC46          --------->ERF1   --------->LBD16 <---------ALFIN1     <----------DOF2 ---->bZIP60(2)      <---------ATERF1(1)        <----------DOF2             <---------DAG2 --------TGA1       <---------DEAR3(1)<---------HSFB2a(2)                  <---------ANAC58         < --------HVH21      --------->ANAC46  --------->HSFB2a(2)      <---------YAB1    --------->YAB1    <- --->LBD16         ------>ZmHOX2a(1) <---------LBD16<-----------GT1        <---------ANAC58        --   gtcagaccgatcttctctctcctcgccgccgcctccaaatccggaagaagcttttttccacctctattatcgaacttgctttataaaaatctaacctttg  15812900                                                                             <----------DOF2                                                                         <---------RAP2.6(2)                                                                         <---------DEAR3(1)                                                   <---------ANAC58     <---------LBD16                                            <---------TOE2(2)        <---------At4g35610     <----------DOF2                        <---------TOE1(2)        --------->ZAT2 ----------->HVH21                          --------->LBD16          <---------ZAT2 ---------MYB59                       ----------->HVH21  ------>ZmHOX2a(1)------>NtERF2 --------At4g35610          <---------At4g35610    <---------ANAC58  --------->At4g35610 ------->At4g35610          <---------ZAT2 <-----------RAV1(2)   <---------REM1(1)               ----   gacctgactttccgacttctctctctgtctagctgcttctctcacccaggtttgccttcctctcaagttgaagctgcggctttattagtttagctattga  15813000                                                                                  <---------ANAC58                                                                                <---------YAB1                                                                       <---------ANAC58                                                                       <---------ANAC58           <---------ANAC58                                         --------->WRKY38(1)           <---------ANAC58                                         --------->WRKY12           <---------ANAC46                                         --------->WRKY45       --------->KAN4(2)      ----------->GT1                                              --------->DOF5.7(2)   <-------TEIL  <---------TOE2(3)  --------->AtLEC2          --------->ATHB12  <---------ANAC46 <---------ANAC58 ----->ZAT6<---------ANAC55(2)                <---------YAB1    <---------TOE2(3) <---------ANAC46   ctctaagaatgttacttgaatccattcacatgagcttcttacgtcgttttcattggtttagctattgacgttgacttgggttttgcttgagttcattctc  15813100                                                                                            <--------                                                                                           <---------ANAC58                                                                                           <---------ANAC46                           <---------ANAC55(2)                                             <---------ANAC58                           --------->ANAC55(2)                        <---------ANAC46<-----------RAV1(1)                           <---------ANAC58                        <---------MYB52(1) <---------REM1(1)                           <---------ANAC58                      <---------ANAC46    --------->ARR11(3)               <----------DOF2  <---------WOX13(1)               <---------ANAC58    <---------ARR11(3)               <---------DAG2 --------->ATHB12--------->MYB52(1) <---------ANAC58 <---------HSFB2a(2)          --------->YAB1 <-----------GT1 --------->YAB1 ---------->DOF2           --------->HSFB2a(2)   tattgtggtctaccatactttttcatgttacttgattgcatatttataaaacggtgctaaaagtattccgttttgtatagcattctagatgttgcttttg  15813200  Previous    Next  AGI:  At2g37680.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN77671.1) Range:  from: 15810321    to: 15812651    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g37690.1    Description:  phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase, putative. similar to phosphoribosylaminoimidazole carboxylase family protein / AIR carboxylase family protein [Arabidopsis thaliana] (TAIR:AT2G05140.1); similar to aminoimidazole ribonucleotide carboxylase [Vigna unguiculata] (GB:AAL48287.1); similar to phosphoribosylaminoimidazole carboxylase [Nicotiana tabacum] (GB:AAR06291.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83526.1); contains InterPro domain ATP-grasp fold; (InterPro:IPR011761); contains InterPro domain Rudiment single hybrid motif (InterPro:IPR011054); contains InterPro domain Phosphoribosylamin Range:  from: 15812793    to: 15817630    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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