Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        --------->LBD16                               --------->YAB1                             --------->ANAC58     <---------YAB1                    <---------WRKY18(1)         <---------ICU4    --------->ARR11(3)       --------->ANAC58   --------->YAB1    <---------ARR11(3)   --------->ANAC58      <---------YAB1    <---------ARR14(2)   --------->ANAC58     --------->ARR11(3)    --------->ARR14(2)   --------->ANAC46     <---------ARR11(3) >TEIL           ------>ZmHOX2a(2)   --------->ANAC46            -------->P<-------TEIL --GLK1(2)      <------ZmHOX2a(2)   <---------LBD16              ------->TEIL       <<<<<<<<<TBF1 --ARR11(3)    --------->ARR11(3) --------->MYB52(1)  ------>ZmHOX2a(2) --------->ATHB12 ->ARR14(2)    --------->ARR14(2) --------->ARR14(2)--------->ARR11(3) --------->ICU4 --ARR14(2)    <---------ARR14(2) <---------ARR14(2)<---------ARR11(3) <---------YAB1          <-----   tctcaatatctgattccgatcttgacctcgcaagcataaccggaacatgatcatgatcttgttcatcaacctcatgattcatcttcttcttcatcttctt  15807200                                                                               --------->ANAC58                                                                            --------->STY1(2)                                                                            <---------STY1(2)                                                                           --------->ANAC58                                                                           --------->ANAC58                                                                       <-----------GT1                                                                      <---------YAB1                                                                  <----------DOF2                                                               <---------ARR11(3)                                                               <---------ARR11(1)                                                               --------->ARR11(3)                  ------->GAMYB                                <---------ARR14(2)                 <-----------RAV1(2)                           --------->ARR14(2)       <---------MYB52(1)                                     <---------CCA1(2)--------->ANAC58      --------->At5g28300                                     <---------ARR14(1)   <---------At5g28300<-------TEIL   <----------ID1       -------->P<---------ICU4 -----DOF2    --------->MYB46(3)   --------->ANAC46 --------->ZAT18<---------YAB1   <---------ALFIN1   ttcttcaccgttactaacaacaggcgcattagaaacaacgcgacgaatggaaacagcactaaccatatctttattactagcaagtcccatcccatggaga  15807300                                                                            --------->HSFB2a(1)                                                                            <---------HSFC1(2)                                                                            --------->HSFC1(2)                                --------->RAP2.3(3)                     --------->ANAC58                               --------->ATERF1(1)                      --------->ANAC58                              <---------ZAT2                         <---------SPL7              <---                              <---------ATERF1(1)                   <---------ANAC46         <-------GAMYB                              --------->ZAT2                        <---------ANAC58        ---------                              <---------At4g35610                   <---------ANAC58        <--------                              --------->At4g35610                  <------NtERF2           --------->ALFIN1                           --------->LBD16                        ------>NtERF2   ------>ZmHOX2a(1)<-                          --------->LBD16                        --------->ATERF1(2)       <---------AtMYB61                       <------ZmHOX2a(2)                         <---------DEAR3(1)       <-------GAMYB                      <---------ARR11(3)                         <---------ATERF1(2)      <------NtERF2                      --------->ARR11(3)               <------ZmHOX2a(1)--------->ANAC46 <---------DEAR4(2)                --------->ARR11(3)                  <---------ICU4<---------ATERF1(1)   <---------DEAR3(1)                <---------ARR14(2)   --------->AtLEC2 --------->At4g35610   <---------HSFB2a(1)  <---       ------>NtERF2  <---------ARR14(2)            --------->YAB1--------->LBD16 <---------HSFB2a(2)      --------->DEAR3(1) <---------LBD16           --------->ICU4--------->DEAR3(1)     <---------DREB2C(2)      <---------DEAR3(1)------>ZmHOX2a(2)     --------->YAB1    --------->ATERF1(1)     --------->ALFIN1    ------>NtERF2--------->CCA1(2)--------->MYB46(3)<-----------RAV1(2)--------->SPL7  <---------ABI4(1)   --------->DEAR3(1) --------->ARR14(2)    <---------ARR11(3)  <---------LBD16   --------->HSFB2a(2)   agacgacgacgacgctcagatatagatcccggagcagccatccaaatatcgtaatcaggagacatcgccggcgtacgaaatttcctagaggcggtggtta  15807400        --------->At4g35610        <---------At4g35610      <---------DEAR3(1)      <---------RAP2.6(2)     --------->RAP2.6(3)    --------->CCA1(2) ------TOE1(3) >MYB55(2)                                           <---------At4g35610 -MYB46(3)                              <---------ARR11(3)                                  --------- -----ZmHOX2a(1)                        --------->ARR11(3)  >>>>>>>>>TBF1             ---------->DOF2 ------TOE2(3)            <---------ETT(2)           --------->At4g35610      --------->ETT(2)   aggaagagacggctgaagaaaacgagagtcgacaatcgtcgaaatcttcatcttcatcggaagaagaagcattagccatgtcgaaagttaaagcagaaga  15807500       <---------YAB1                                    ------>ZmHOX2a(1)     <---------ICU4                                    <---------ICU4     --------->YAB1                                ------>ZmHOX2a(1)                              <--    <------ZmHOX2a(2)     --------->YAB1     <---------ARR11(3)                         <------ZmHOX2a(2)   --------->ARR11(3)  --------->WOX13(1)    --------->ARR11(3)        <---------YAB1  <---------ARR14(2) >At4g35610         --------->GLK1(2)       <---------GLK1(2)         <-----------TGA1 --------->ARR14(2)   gagacgatcatgagtttcgaagaatctatcatcatcttcatcttcaaaatctcctaatccttcccagttcatcgtcattgtcttcttccgatccaatttg  15807600                                                                                      <---------YAB1                                                 <---------WOX13(1)                  <---------TOE2(3)                    ------>MYB83  --------->ARR14(2)                                --------->YAB1                    ------>MYB46(1)             <------------CBF                 <------------CBF                    -------->P--------->ANAC46 <---------MYB46(3)               --------->ATHB12                  <---------MYB111(1)          --------->ATHB12                <---------YAB1                -------->P  <---------ALFIN1  <---------YAB1   --------->YAB1  <------ZmHOX2a(2)   <- ---------GT1--------->At4g35610  <---------ARR14(2) <---------GLK1(1)         <---------ATHB12 <----   tttccatcttccatcatctaccaactagctccaccgaatttgaaaatggtgattgaaatctgaaatcagaaaatttggccgatcattgatgattcagagg  15807700                                                  <---------O2                                                  --------->O2                                                  <---------ANAC58                                                  --------->ANAC55(2)                                                  <---------ANAC46                      <---------LBD16             <---------ANAC55(2)           --------->ATHB12         <------ZmHOX2a(1)          --------->ICU4    --------->ICU4        <---------ANAC55(1)                      ----------  <---------MYB52(1)--------->GLK1(2)---------->DOF2         <----------DOF2               <-------TEIL -----NtERF2        --------->ARR14(2)            <---------ANAC58                   <---------REM1(2) -----ABI4(2)       <---------ARR14(2)   --------->ALFIN1  ---------->ID1        ------>ZmHOX2a(2)   caccgttatggaatgatgggcaaatcgggaattatggaggaaagtgttgaagacgtgttttgtctttttgtaagacacatcgatctcttcacgttcaatt  15807800                                                  ------>ZmHOX2a(2)                                                 <------ZmHOX2a(2)                                                <---------ARR14(3)                                                --------->ARR14(3)    <---------ANAC58          -----                                     <---------YAB1                   <---------ANAC58          <----    --------->YAB1    --------->YAB1 ----------->GT1            ---------->DOF2         <----------DOF2   <---------YAB1     --------->AHL20(2)        <---------ARR11(3)    <---------ANAC46 <---------ANAC58 -->CBF    <-------TEIL<---------AHL20(2)       --------->ARR11(3)   --------->ALFIN1  <---------ANAC58   tcattaccataagtccataactaataaaaatgtttgatgatgttaattaagatcttaagtcaaaaccaaaggtcgtggaagcatgttttgctttcgttat  15807900                                                                             <---------GLK1(2)                                                                             --------->ARR11(3)                                                                          <---------TOE2(3)                                                                         ---------->DOF2                                                                   <---------ANAC58                                                                   <---------ANAC55(1)             <-                                                                   <---------ANAC46                --               --------->ANAC55(2)                                 --------->ANAC55(2)           <---      --------->TOE1(3)                       --------->YAB1       <---------ANAC55(2)  --------->AHL20(2)      --------->TOE2(3)              --------->ZAT18               <---------ANAC58     <---------AHL20(2) ---->ICU4    <---------TOE2(3)   <---------ZAT6               <---------DAG2<---------ARR11(3)  <--- -----YAB1   <-----------GT1  <---------YAB1<---------ARR11(3) <----------DOF2         --------->AHL20(2)   aattcaaaccttaatttacgttttgttcgactattagtgtgaacaaaatcatatactatgttcgactttacgtgttaaagatacttacataaaattacta  15808000                     ----------->GT1                     <---------ZAT6                   <---------ANAC58                   <------MYB83                   <---------ANAC58                   <---------ANAC46                   <------MYB46(1)             <---------TOE1(3)            ---------->DOF2 -----ZmHOX2a(1)  <---------AtMYB61<---------AHL20(2)                     <---------YAB1 --------->ZAT6 ------->YAB1<---------TOE2(3) <----------DOF2            ---------->ID1 --------->AHL20(2) ------TOE2(3)    --------->MYB111(2)         --------->AHL20(2)         <---------AHL20(2) ------TOE1(3)    --------->MYB46(2)          <---------AHL20(2)  <-----------GT1    --------->AHL20(2)   aggataactatttttaaagtttggtgttaatttctttttaatcaacaattttttgtttttgtttttttttgctatttttatagcgaatttaaaactacta  15808100  Previous    Next  AGI:  At2g37670.1    Description:  WD-40 repeat family protein. similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G02430.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15640.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65559.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 15804462    to: 15807614    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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