Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               <<<<<<<<<SARD1                                                                             <<<<<<<<<CBP60g                                                                            ------>MYB83                                                                         --------->ANAC58                                                                         --------->ANAC58                                                                       <----------ID1                                                                   ---------->DOF2                                                                --------->ORA47(1)    --------->AtMYB61                 --------->AHL20(2)                            --------->At1g77200   --------->MYB46(3)                --------->AHL20(2)                             --------->DREB2C(2)   <---------ATHB12                <---------AHL20(2)                             <---------ETT(1)<-----------GT1          ----------->GT1                                      --------->DEAR4(1)    <---------MYB55(2)         --------->LBD16                                       --------->DEAR3(1)   ------>MYB46(1)         <---------TOE1(2)                --------->YAB1 ----------->HVH21  ------>MYB46(1)         <---------TOE2(2)         ---------->DOF2<---------YAB1----------->RAV1(1) ------>MYB83    -        <-----------RAV1(2)   ----------->GT1   <---------ICU4--------->DEAR3(2)    -------->P  -----   accaagagtcccaggtaaataaataaccaaggtggaataaagaataaaaatcatttttggtgacaccgacaaagcaccaaatttccaaccactacttcca  15771400                                       <-----------ARR10                                       <---------ARR11(3)                                       --------->ARR11(3)                             ------>ZmHOX2a(2)                                     <---------CCA1(1)                            <------ZmHOX2a(2)                                      <---------RVE1(1)                           <---------ARR11(3)                                     <---------ARR11(3)                           --------->ARR11(3)                                     --------->ARR11(3)      --------->YAB1       <---------ARR14(3)                         --------->AHL20(1)      <---------ICU4       --------->ARR14(3)                         --------->AHL20(2)     <---------ATHB12      --------->ARR14(2)                         <---------AHL20(2)   --------->ANAC46        <---------ARR14(2)         --------->AHL20(2)    <-----------GT1  --------->MYB46(3)     ----------->ARR10    <---------ATHB12       --------->AHL20(2) ------>TEIL    <----------ID1 ------>ZmHOX2a(1)      <---------AHL20(2)  --------->YAB1<---------YAB1 ---------->AtSPL8  ---------->DOF2   <---------CCA1(2)  <---------YAB1   --------->AHL20(2)   tgtacccatcataacaaaacaccaaagaagatcctacttcatatctcactcattcatttattaataccaaaattaattatacatgatattttgattacga  15771500                                                                                       <-----------RAV1(1)                                                                                       <---------MYB46(3)                                                                     ----------->GT1  <---------WOX13(1)                                                                     <---------ANAC55(2)                                                 ---------->DOF2     --------->ANAC55(2)                    <-----------GT1         ----------->GT1         --------->MYB59   <---------YAB1           ---------->DOF2                ---------->DOF2   ---------->DOF2         --------->ATHB12<     <---------YAB1--------->AHL20(1) ---------->DOF2  <----------DOF2         ---------->DOF2    <--   agacatgctgaatgaaagaaatatactatattgttttacaaaaagaaagaaaaaagactttaaaaagagttatgtaataccgaaagtgattgttgcattt  15771600                                  <---------YAB1                                  <---------TOE2(3)                                 <-----------GT1                                --------->YAB1                                <---------ICU4                                       <-----------GT1                               --------->ICU4                                      <----------TaMYB80                            --------->AHL20(2)                      ----------->GT1<---------KAN4(1)          --------->AHL20(2)<---------AHL20(2)                    <---------ORA47(1)--------->KAN4(2) ---------GLK1(2)    --------->ZAT6                      <---------ARR11(3)        --------->KAN4(1) -------TOE2(3) --------->ANAC46-------->HAHB4           --------->ARR11(3)<---------YAB1 --------->ANAC46   gagattatcaaattatacactgaatactacttaattatcgttacaaataacatttggaagacctattggccggttttatttttgaatattccactcagtt  15771700                                                                            <---------YAB1                                                                          <---------ICU4                                                                          --------->YAB1                    <-----------HVH21                                    --------->ICU4                   <----------DOF2                                       <---------YAB1                  <---------DAG2                                       <--------HAHB4               <-----------GT1                                         --------->ATHB51            <---------ICU4                                             <---------ICU4           --------->ICU4                                              --------->YAB1         <------        <---------AHL20(2)                                            <---------YAB1         --------        --------->AHL20(2) <------NtERF2                              --------->ICU4        ------>NtERF2     <---------AHL20(1)   --------->LBD16  ------>MYB46(1)          --------------->AGL15  --------->ANAC46     --------->AHL20(1)  --------->DEAR3(1)------>MYB83            ----------------->AGL3  <---------ALFIN1    --------->AHL20(2)  <---------LBD16  <---------MYB59        <----------DOF2           --------->MYB46(3)   taacaaatatataattttgacctttcgccggagaaaaaacaaaccaaacttacttagtaagaagcactttccattattattatctctgttcccccaccac  15771800                                                           <------NtERF2                                                          --------->LBD16                                                          ------>NtERF2                                                         --------->ANAC46                                                         --------->ANAC58                                                         --------->LBD16                                                         --------->ANAC58                                                        --------->ATERF1(1)                                                        <------NtERF2                                                        <---------LBD16                                                       ------>NtERF2                                                       <---------ATERF1(1)                                                      --------->PCF5                                                     --------->ATERF1(1)                                                    <---------ATERF1(1)                                                    ------>NtERF2                                                   --------->DEAR3(1)                                                  <---------LBD16                                                  --------->ATERF1(1)             ------>NtERF2                  --------->YAB1                  <------NtERF2                   --------->LBD16                  <---------ICU4                 <---------ATERF1(1)             --------->ANAC46                 --------->ICU4        ------->GAMYB--------->LBD16              --------->ANAC58  --               --------->YAB1        -------->P <---------ARR14(2)              <---------LBD16    --               <---------ICU4       ------->GAMYB------>NtERF2                ------->GAMYB        <-              <---------YAB1       <---------MYB111(2)--------->DEAR3(1)    --------->ZAT2        ---         --------->ANAC55(2)       --------->MYB46(3)------>NtERF2    <---------SPL7----------->RAV1(1)       <-----------GT1      --------->YAB1      --------->ARR14(2)  <------NtERF2--------->ANAC58 <--      *TSS    --------->ICU4<--------ATHB1     <---------At4g35610  --------->ATERF1(1)----------->RAV1(1) ---ALFIN1  --------->YAB1 <---------ATHB12   <---------ATERF1(1) <---------DEAR3(1)<---------ALFIN1 ->ANAC46--------->ANAC46  <---------ATHB51------>ZmHOX2a(1)  <------NtERF2<---------ALFIN1     -----   atttcatattcacataataataatgttcaataatacaacaacctccttcggctccggccccggcatcgtcgtcgtcccaactcccgccacaacagttccc  15771900           --------->LBD16           --------->ANAC46                                                       --------->LBD16          --------->LBD16                                                        --------->ANAC46          <---------LBD16                                    --------->DEAR3(1)  --------->LBD16    ------>MYB46(1)                                          --------->AtMYB61  --------->LBD16    ------>MYB83                                            <---------MYB55(2)  <---------LBD16  --------->DREB2C(2)                                  --------->AtMYB61 <---------ARR14(2)  ------->GAMYB                                       --------->GLK1(1)  --------->ARR14(2)  --------->DEAR3(1)                              --------->TOE1(1)     --------->At4g35610  --------->DEAR4(1)                              --------->TOE2(1)     <---------At4g35610 ------->AtMYB61       <---------ALFIN1          --------->At4g35610    <---------ZAT2 ------->DEAR3(1)    <-----------HVH21         --------->YAB1<---------ALFIN1   --------->HSFB2a(2) --------ALFIN1--------->SPL7                 <---------YAB1--------->MYB46(3)  <---------HSFB2a(2) ------>MYB46(3)    --------->AtMYB61       <---------ICU4--------->ANAC46   ------>ZmHOX2a(1) -------MYB55(2)--------->MYB46(3)         --------->ICU4 <---------ALFIN1  <---------ALFIN1 <------- ---->ANAC46--------->LBD16        <---------ALFIN1  --------->SPL7     --------->ZAT2   --------->DEAR3(1)   accaccgacttccccggtaccaccatcacttccaactccaccttcattatcatcggacctccaccaccgttcccagctcctccccggagcatcgacctta  15772000                                                                                                 <---                                                                                                -----                                                                                              <------                                                                                             ------>NtERF2                                                                                             <------NtERF2                                                                                             --------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                           --------->RAP2.3(1)                                              <----------DOF2                              --------->RRTF1(1)                                       <---------ARR14(2)                                  <------NtERF2                                      <---------SPL7                                      ------>NtERF2                                   ------>NtERF2                                          --------->LBD16                                  --------->DEAR3(1)                   ------->GAMYB     --------->ANAC46                    <-----------TGA1<------NtERF2                     --------->MYB46(3)--------->MYB46(3) ------>ZmHOX2a(1)  <-----------HVH21--------->DEAR3(1)               --------->ANAC46------>ZmHOX2a(1) --MYB59          ---------->ID1  <---------DEAR3(1) <-----------GT1 <---------At4g35610<---------MYB55(2)   ctcctctcaaactaatcttcgtcgtcatcgccttcgtcgccgttcccgctttagtttacgctctcttcttcaacggcccatgttcttcctcccgccgcaa  15772100                                                --------->DEAR3(1)                                               --------->MYB46(3)                                               <------NtERF2                                               --------->DEAR3(2)                                              ------>NtERF2                                          --------->bZIP60(1)                                          --------->O2                                          --------->ANAC58                                          --------->ANAC58                                          --------->ANAC55(1)                                          --------->ANAC46 ------>ZmHOX2a(1)                        <---------TGA1a ------ALFIN1                             <---------O2           <------ZmHOX2a(2) ---->GLK1(1)                           <---------ALFIN1    ------>NtERF2                 --------->GLK1(2) ---ALFIN1        <---------ARR11(3)   ----------->HVH21    --------->LBD16               <---------ARR14(2) ->LBD16       <---------ALFIN1       --------->AtMYB61    --------->ANAC46               --------->ARR14(2) >RAP2.3(2)  ----------->RAV1(1)     --------->ANAC46  ------>NtERF2                 <---------LBD16 >ANAC58 <---------LBD16 ------>ZmHOX2a(1)<---------bZIP60(1) --------->DEAR3(1) --------->ARR14(2) >ANAC58 --------->HSFB2a(2)         --------->bZIP60(2)--------->ANAC46        <---------MYB52(1) >RRTF1(3)--------->ANAC46         <---------ALFIN1   <---------ALFIN1     --------->AtMYB61 >DEAR3(1)--------->ANAC58      <---------ARR14(2) <---------ETT(2)        <---------ALFIN1 >ANAC46 <---------HSFB2a(2)    --------->ARR14(2) --------->ETT(2)       <---------ABI4(2)   ------- >RAP2.6(2) <---------ALFIN1------>NtERF2 --------->TGA1a  --------->DEAR3(1)  --------->At5g28300--- >RRTF1(2)--------->ANAC58 --------->DEAR3(1)<---------ALFIN1<------NtERF2--------->MYB46(3)<-------- >RAP2.3(3)--------->LBD16 ----------->HVH21 --------->DEAR3(1) <-----------HVH21<---------ARR14(2)   ctcctcttcttcccgcaccagctcttcctccgacgatacacctcacgccaccgtcgacaccccgccgatcaccgagaccaccgtaacttcggaatccgga  15772200                                                                                ------->TEIL                                                                     ----------->RAV1(1)               <-------TEIL                              --------------------->WRI1<---------LBD16              --------->CCA1(2)                 --------->LBD16     ----------->HVH21------>NtERF2             --------->ARR14(2)                <---------ANAC58     --------->DEAR4(1) --------->HSFB2a(1)                           <---------ANAC58     --------->At1g77200 <---------HSFB2a(1)                           <---------ANAC46     --------->DEAR3(1)      --------- -->LBD16    --------->ARR11(3)            --------->ZAT14          --------->DREB2C(2)   <---------MYB52(2) -------->GT1<---------ARR14(2)            <---------ZAT14         --------->DEAR3(2)--------->LBD16 -LBD16  ---------->DOF2---------->DOF2    --------->ZAT18      <---------ZAT14 <---------GLK1(1)  <-   gggaaattccacaaagatacacattctaaagagattggaaacgagtgctccgtgtgtctcatggtgttcaccgacagcgatgaactccggcaactaagcg  15772300  Previous    Next  AGI:  At2g37580.1    Description:  zinc finger (C3HC4-type RING finger) family protein. Identical to RING-H2 finger protein ATL2J (ATL2J) [Arabidopsis Thaliana] (GB:O80927); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT4G33565.1); similar to unknown [Populus trichocarpa] (GB:ABK93860.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 15771806    to: 15772631    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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