Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          --------->SPL7                                                                      <---------SPL7                                                                     --------->ANAC55(2)                                                                  <------ZmHOX2a(2)                                                                 <---------ARR11(3)                                                                 --------->ARR11(3)                         <-------GAMYB                           <---------ARR14(2)                     <---------DEAR3(1)                          <---------ARR14(3)      ------>ZmHOX2a(2) <---------DEAR3(1)                       --------->ARR14(2)     <------ZmHOX2a(2)  <---------ANAC46                        <---------GLK1(1)    --------->ARR14(2) ------>NtERF2                          <---------HSFB2a(2)    <---------ARR14(2) <------NtERF2                      <----------DOF2 ------>ZmHOX2a(2)  <---------LBD16             --------->bZIP60(1)  <---------ANAC55(2) ------ZmHOX2a(2)  ==============MYC_MYB        <---------GLK1(1)--------->ARR14(3) ------->ARR14(2)  ==================================================bZIP_DOF   ----------->GT1     < --------ARR14(2)  <---------TGA1a              <---------bZIP60(1)------>ZmHOX2a(2)               -- ------->ARR10     <---------O2            <---------At4g35610--------->HSFB2a(2)                  <-   ggatccgatctcgatacacagacgcggcgttggaattgtacttggagatgatatcagtctctttcgagatcccgtactgagcgagaaaattgttgagacg  15764300                                                              ----------->HVH21                                                             ------>ZmHOX2a(2)                                   --------->TOE1(1)        <------ZmHOX2a(2)                                   --------->TOE2(1)        --------->At4g35610                                 ------>ZmHOX2a(2)          <---------At4g35610                    --                                <---------GLK1(1)          --------->GLK1(2)                       --                               <---------AGP1              <---------ARR14(2)                    <---                               --------->ARR11(3)          --------->ARR14(2)                   <----                               <---------ARR14(2)          <---------AGP1                       <----           --------->DEAR3(1)  <---------ARR11(3)          ------->TEIL                        ------      ------>NtERF2            --------->ARR14(2)       --------->ANAC55(2)                    <-----    <---------ANAC58          <---------CCA1(2)         <---------ANAC46                   <---------DEAR3(1)    <---------ANAC58       ------>ZmHOX2a(2)            <---------ANAC55(2)                --------->ANAC46 -------GAMYB            <---------AGP1              ----------->HVH21                  --------->MYB46(3) ------->MYB52(2)    <---------ANAC58                ----------->TGA1    XXXXXXXXXXXXXXXXXXXXX>MIR848 --------MYB46(3)    <---------ANAC58        ------->TEIL  <-----------ARR10       --------->AtMYB61<   ctcgttgcctccagcgtccattttcttgatctggatctcggaccatgaatccatggtgacggatctgacgaatgagatgtgaacacctaaaccacggtgc  15764400      <---------HSFB2a(1)      --------->HSFB2a(1)  --------->LBD16 ------>P                                                                                  --------->ZAT2 ------->MYB52(1)        --------->GLK1(2)                                                 <---------At4g35610 -------DOF2          <---------YAB1                        <---------HSFB2a(2)            --------->At4g35610 -----ANAC58      ------->MYC3                              --------->HSFB2a(2)            <---------ZAT2 -----ANAC58 --------->ANAC58                        --------->ARR14(2)                   --------->LBD16 --->ABI4(2) --------->ANAC58                        <---------ARR14(2)                   ------>NtERF2 ----MYB46(3)--------->AtLEC2                        <---------GLK1(2)                  <---------LBD16 ---------LBD16   <-------MYC3            ------>NtERF2    <---------LBD16    --------->ARR11(3)   ttaccggagcattccaagcacatgaagattccatatgaaatcgatgcccattgtggattcttctgggagcaatcgacacagaccttgttctccggctgag  15764500                                         <------NtERF2                                       <---------ATERF1(2)                                       <---------RAP2.3(3)                                       <---------RAP2.3(2)                                       <---------DEAR3(1)                                       --------->ATERF1(2)                                --------->AHL20(1)                                --------->AHL20(2)                <---------AGP1                                <---------AHL20(2)                --------->AGP1 <---------HSFB2a(2)                                <---------AHL20(1)  ----------->HVH21     <-----------RAV1(2)<-------                               --------->AHL20(2)  ------>ZmHOX2a(2)     ------>ZmHOX2a(2)   <-------                          ------>NtERF2<---------RAP2.6(2)        --------->ARR11(3)         <-------                        --------->ATERF1(1)       <------ZmHOX2a(2) ------>ZmHOX2a(2)    <---------At4g35610                       ------>NtERF2  --------->RAP2.6(3)         <---------ARR11(3)    <---------YAB1                       --------->At4g35610       --------->ARR14(2)--------->CCA1(2) --------->GLK1(2)        --------->ANAC55(2)    --------->YAB1    <---------ARR14(2)<------ZmHOX2a(2)--------->ARR14(2)       --------->SPL7  <---------At4g35610 <---------GLK1(1)      --------->ARR14(2)<---------ARR14(2)     <---------SPL7    <---------ATERF1(1) --------->GLK1(1)      <---------ARR14(2)<---------GLK1(2)    <---------ANAC58  <---------DEAR3(1)------>NtERF2           ----------->ARR10--------->HSFB2a(2)    --------->ATERF1(1)--------->ZAT2 <---------LBD16      ----------->HVH21  --------->ARR14(2)    <---------ANAC58  --------->DEAR3(1)--------->LBD16  ----------->RAV1(2)  <---------ARR14(2)   attggagcgtccgtaatcgtctcgccgctgccattatattgccggctctccgatctgacccctgactagatctgatccaggttccagattctgatgcgtt  15764600                                                                 <-------MYC3                                                                 <-----------HVH21                                                                 ------->MYC3                                                                <---------O2                                                                <---------bZIP60(1)                                                                <---------TGA1a                                                                --------->TGA1a                                                                --------->O2   *TSS                                                                --------->ANAC55(2)                                                                <---------ANAC58                                                                <---------ANAC55(2)                               --------->At5g28300              <---------ANAC46                              ----------->GT1                   <---------ANAC58            ---------    ---------->ID1          <-------MYC3                    <-----------HVH21--------->ANAC58 --ANAC58         <---------ANAC58                 <---------ANAC58          --------->ANAC46     <-- --ANAC46         <---------ANAC58                 <---------ANAC58          --------->ANAC58     --- --ANAC58 <---------ATHB12  ------->MYC3           <---------ANAC46    --------->At4g35610  <--------   ttttttggctcaatcgttttgcttaataaacgtggtaacttgaataattttgtgcgtgtttttgtcacgtgagagcttcactcaatatttccaaggtctc  15764700                                                                       ------->GAMYB                                                                      --------->MYB46(3)                                                          --------->HSFB2a(2)       <-------MYC3                                    --------->ARR14(2)       ------->MYC3           --------------------->WRI1  <---------HSFB2a(2) >ARR11(3)                    <----------DOF2        <------NtERF2   --------->ANAC58 -------At4g35610   --------->DAG2          <---------GLK1(1)      --------->MYB46(3) ------>At4g35610  ---------->DOF2   <---------DEAR3(2)<---------ARR14(2)          --------->ZAT6 -ARR11(3)   --------->At4g35610<---------AtMYB61    --------->LBD16 --------->ANAC58               <   tgctaaaaacgtgtttgctcaaaaagcatgggctttggtcgcttcgatatcgggccgggtctggaaggaacaaccaaaaaaactaaaactactctcgttt  15764800                      <---------HSFB2a(2)                      --------->HSFB2a(2)             --------->TOE2(3)             --------->TOE1(3)          <---------ALFIN1                 --------->ZAT2            ------>ZmHOX2a(1)       --------->ANAC46                    <---------ZAT2  --------->ANAC58      <---------At4g35610                  <---------At4g35610------>MYB83--------->At5g28300      --------->At4g35610                <-----------RAV1(2)  ------>MYB46(1)                -------- <<<<<<<<TBF1------->GAMYB         ---------->DOF2         --------->ANAC58         ------->TEIL ----   tcttcttccgctcaaccctaacttgtggaagtcagtttaaagtccaggtgagcattaagacaccaaatgtccttgctgtgaatatgaacgggagaacaac  15764900                                                           <---------TOE2(3)                                                      <---------ZAT6             <---------WOX13(1)                                               --------->GLK1(2)               --------->ATHB12                                              <---------ARR14(2)           --------->ATHB12                                              <---------GLK1(2)      <---------ANAC58                                <---------REM1(1) <---------YAB1     <---------ANAC58                         --------->ZAT14      --------->ARR14(2)     <---------ANAC46        <------- ->MYB46(3)              <---------ZAT14    ----------->ARR10   --------->MYB52(2)           -------- ------->HVH21       --------->MYB52(1) ----------->HVH21  <---------TOE1(3) <---------WOX13(1)   tgatgggggtctgaagaaggaattaactgaagtgatgaagcagggacagattctgagtgtcaaggtttgtttcttgttcattgattgttatgcattgcac  15765000                            <----------DOF2                      <---------ARR11(3)                                                     ------>MYB83                      --------->ARR11(3)                                                     ------>MYB46(1)                     --------->YAB1                             <------MYB46(1)            <---------MYB59       --------->TOE1(3) --------->GLK1(2)        --------->At4g35610--------->HSFB2a(2) ------->TEIL    <-----------GT1 <---------YAB1        --------->YAB1    --------->ATHB12        --------->At4g35610 --ZAT14          --------->YAB1      --------->ZAT6     ---------->DOF2          <-----------RAV1(2) ->ZAT14       <----------DOF2<---------AHL20(2) ----------->GT1<------MYB83    ----------->RAV1(1)   tgttttaaaccataagtctttgatgatattcttttatttttcactaataagcagataaaaaaagattggtactggaattgtccaacaggtgaacctaatg  15765100                                                                                                    <                                                                                                   <-                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                              <------                                                                                              =======                                                                                              -------                                                                                              -------                                                                                              -------                                      --------->ZAT14                                         =======                                      <---------ZAT14                                         <------                     <----------ID1 <---------At4g35610                                    <---------WRKY38(1)                  --------->MYB52(1)--------->At4g35610                                    <---------WRKY12                  ---------->DOF2<------NtERF2                                          --------->LBD16           --------->YAB1        --------->At4g35610                                  <---------LBD16          <---------YAB1        ----------->RAV1(1)                      <---------At4g35610  -------          <---------TOE2(3) --------->DAG2                     <------ZmHOX2a(1)  <---------ICU4-----         <-----------GT1   ---------->DOF2              ------->TEIL     --------->At4g35610<--------   tagagtcttattaacataactaaaggccaaaaagcggcagaacacttcatgaagcatggacttgaggaattgttcagcttcacattattccggtccacgt  15765200  Previous    Next  AGI:  At2g37550.1    Description:  ASP1 (PDE1 SUPPRESSOR 1); DNA binding. similar to AGD6, DNA binding [Arabidopsis thaliana] (TAIR:AT3G53710.1); similar to AGD6, DNA binding [Arabidopsis thaliana] (TAIR:AT3G53710.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO15618.1); contains InterPro domain Arf GTPase activating protein; (InterPro:IPR001164) Range:  from: 15762175    to: 15764679    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g37555.1    Description:  other RNA Range:  from: 15763800    to: 15765357    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version