Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 <-----                                                                                               <-----                                                                                               <-----                                                                                               ======                                                                                               ======                                                                                               ======                                                                                               ------                                            --------->ANAC58       --------->ZAT2              ------                                            --------->ANAC58       <---------ZAT2              <-----                                            --------->ANAC46       --------->At4g35610         <-----                                         --------->ZAT14         ====================================                                      --------->LBD16            ------->GAMYB      <---------ANAC55(2)                                     <---------HSFB2a(2)        <---------LBD16     --------->ANAC58                                     --------->LBD16          <-----------GT1       --------->ANAC46  <-----------HVH21                  --------->HSFB2a(2)  <-----------ARR10         --------->ANAC58  <-----------TGA1                   --------->ANAC46     <---------ARR14(2)   <---------bZIP60(1) --------->bZIP60(2)                <---------LBD16   <---------LBD16  --------->STY1(2)---------->DOF2 ----->TEIL            --------->ANAC58  <---------ZAT18  --------->ARR14(2)   --------->bZIP60(1)  < ----TEIL              --------->ANAC58  <---------ZAT14--------->LBD16<---------STY1(2)=============   gcatcgtcacttacagtctcttcggacccaaaatcactcccggagcactcaactaaaccggatttaaccggctggctagagacatcacgaaaaagagacg  15756500        --------->LBD16      <---------LBD16 ----ANAC46 ----ANAC58 ----ANAC58 ==========bZIP_DOF                                     --------->HSFB2a(1) ==============MYC_MYB                                  <---------HSFB2a(1)                     <---- ==========bZIP_DOF                                     --------->HSFC1(2)                    <------ --->ANAC55(2)                                          <---------HSFC1(2)                ------>ZmHOX2a(2) --->TGA1a                                       --------->TOE2(3)                      --------->ARR11(3) ----O2------->GAMYB                            <---------ICU4           <---------ANAC58--------->GLK1(1) ----TGA1a ---------->DOF2                      --------->ATHB12         <---------ANAC58<---------GLK1(1) ====MYC_MYB                <---------GLK1(1)   <--------HAHB4    <---------ANAC58      <---------ARR11(3) ----------DOF2       --------->ARR14(2)       --------->ICU4     <---------ANAC58 --------->DAG2 ====bZIP_DOF         <---------ARR14(2)       <---------YAB1<----------DOF2      ---------->DOF2  <-   tgctttcaaccggagaagcgactggatttgaaatctccgatgtaatgtcatcattagaagcttctttagcttgtttcttactgggaaagtgatctccttt  15756600                 <---------ICU4                 --------->YAB1        <---------ICU4                                                                           <---     --------->REM1(1)    <---------CCA1(2)                                                      ----  --------->TOE1(3)   --------->ANAC58   <-----------GT1                                         ----  --------->TOE2(3)   --------->ANAC58  --------->WRKY38(1)   --------->At4g35610                <--- -----ICU4      <---------YAB1          --------->WRKY12      --------->GLK1(1)                  <--- ----DOF2    <---------YAB1     <----------DOF2               <---------At4g35610                ---- ----------GT1--------->YAB1<---------CCA1(2)          <----------DOF2                    --------->YAB1   attaccttcatcagtatcatcatcaagcctatctcttttcaattgaccattctcttcctttggcatctccaaacaaatagttccttctcccatcagaaat  15756700                                                                   ----------------->AGL3                                                             ------>ZmHOX2a(2)                                                            --------->CCA1(2)          --------->ANAC46                                  <------ZmHOX2a(2)        <-----------GT1                                    --------->ARR11(3)      <---------ARR11(3)                                   <---------ARR14(2) ------ARR11(3)                            --------->ZAT6  --------->ARR14(2) ----->ARR11(3)                        --------->At5g28300 <---------ARR11(3) ----->AHL20(2)                       ----------->GT1      <---------AGP1                --------->YAB1 ------AHL20(1)                    --------->MYB52(1)      --------->AGP1   --------->At4g35610     < ------AHL20(2) --------->ATHB12   ----------->RAV1(1)   ----------->ARR10  <---------At4g35610     - ----->AHL20(1)<---------YAB1   --------->ANAC46         --------->MYB59 <---------At5g28300   <-----   atattcaatatcacaacacgattgcatccaatagacacaacagtaacactaacttgagttagatctgaatccaattacagctccactagaattgtaatct  15756800                                     --------->MYB52(1)                                     <---------DOF5.7(2)                <------------AtMYB77<---------WRKY38(1)    ------>ZmHOX2a(1)        --------->ATHB12  <---------WOX13(1)    <---------LBD16         <---------YAB1     <---------YAB1                   --------------->AGL15   --------->TOE1(2)       <-------GAMYB     --------->ATHB12                   <---------DAG2 <---------HSFB2a(1)      <---------MYB46(3)--------->ICU4                      <----------DOF2   --- ---------ARR14(2)       --------->ALFIN1  <---------WOX13(1)                   <---------------AGL15 -------->ARR14(2)<-----------HVH21--------->DOF5.7(2)              ---------->DOF2         --------- ----LBD16    --------->GLK1(2)  <---------MYB46(3)               *TSS --------->YAB1       <--------   ggaatcctcggagaagaaactgtcaaggtggttattggttaacggattgattaatgagtcgaattcaatccaaagatgatgactttatgaagaaatcaat  15756900                                                                                     --------->CCA1(2)                                                                                    --------->ARR14(2)                                                                                    <---------ARR11(3)                                                                                    <---------ARR14(2)                                                                                    --------->ARR11(3)                                                                                    --------->AGP1                                                                                    <---------AGP1                                                                                    <---------ARR14(3)                                                                                    --------->ARR14(3)                                                                                   --------->RVE1(1)                                                                                ---------->DOF2                                                                             ------>ZmHOX2a(2)                                                                            <------ZmHOX2a(2)                                                                           <---------AGP1                                                                           ------->TEIL                                                                           <---------ARR14(2)                                                                        --------->ANAC55(2)                                                            --------->YAB1 --------->ARR14(2)    ----  ---------->DOF2                       ---------->DOF2------------>CBF <---------ANAC55(2)    ------ ------>YAB1                    --------->CCA1(2)    --------->YAB1    <---------LBD16------>ZmHOX2a(2) --->CBF         ------------------------>ANAC81   <---------KAN4(2)  <-----------GT1<------ZmHOX2a(2) -ATHB12  --------->YAB1   <------ZmHOX2a(1)    <---------ANAC46      --------->MYB52(1)     --------   tcataaaaggaagcataagaatcaaacgaggaagataagagtaaaagtttgggtataatcaatagtagggaattacggatctaaaagatctggagataaa  15757000                                                    <---------------------WRI1                      --------->ANAC58              <------NtERF2              --------->ALFIN1                      --------->ANAC58            <---------DEAR3(1)        --------->DAG2         <-----------------AGL1                  --------->SPL7            ---------->DOF2       --------->GLK1(1)                         <---------ORA47(1)    <---------TOE2(3)           --      --------->ARR11(3)                         --------->RAP2.6(3)   <---------TOE1(3)    --------- ----->DAG2  <---------ARR14(2)                 <------ZmHOX2a(1) <---------ZAT6--------->ALFIN1 ---- ---->DOF2   --------->ARR14(2)                ----------->HVH21 <---------TOE1(3)        --------->CCA1(2) ->CCA1(2)----------------->AGL1        ---------->DOF2          <---------TOE2(3)   ---------->DOF2<   aggtaagagatttcgaatatgggaacgaaattagatagagagaaaagagaggacggcgaagaaaattagggttagggtaaagggggggaaagagataaga  15757100                                    --------->ATERF1(1)                                    <------NtERF2                                   --------->RAP2.6(2)                                   <---------RAP2.3(1)                                   <---------ATERF1(1)                                   ------>NtERF2                                  <---------DEAR3(1)                                  <---------RAP2.6(2)                                 --------->RAP2.6(3)                          ------->PIF5                          <-------MYC2                          ------->MYC4                          --------->TOE1(2)                                                 ---------                          ------->MYC3                                                   --------->ANAC58                          <-------PIF5                                                   --------->ANAC58                          ------->MYC2  <---------MYB52(2)                             ---------->DOF2  --------->ALFIN1        <-------MYC3  --------->MYB46(3)                        =================== ------->ALFIN1          <---------ANAC58  ------->TEIL      <----------DOF2      <---------------AGL15 >CCA1(2)                <---------ANAC58------->GAMYB   --------->DAG2           <---------DAG2 ----->ALFIN1      <---------------------WRI1           ---------->DOF2           <----------DOF2 ---------ANAC46>>>>>>>>>TBF1<---------AtLEC2       <----------ID1                --------------->AGL15   tgggggggagagaaggaagaagaaggaacgtgcaaggcggcaacgaaccagaaaacgaaaaagctttgttcgcggtccagattacttttcaaagcaaaga  15757200                                                       <---------------AGL15                                                       --------------->AGL15                                                      <-----------------AGL3                                                 --------->AHL20(2)                                                 <---------AHL20(2)                    ---------->DOF2          <---------CCA1(1)                    ----------->GT1   -               ----------->GT1               <---------RVE1(1)                  <------ZmHOX2a(1)   -      --------->CCA1(2)                     --------->ARR11(3)         --------->YAB1             ---      --------->At4g35610              --------->MYB52(1)<---------AHL20(2) --------->ICU4   -------- ->DOF2      ---------->DOF2 ----------->GT1<---------ARR11(3)         ----------->GT1 ---------->DOF2 ======================================================================MADS_MADS<--------------------   atagagagagatgaagaaagaaaaaagaaaacagaaaaaaaaaacagatatttttttatatttttggaaaaaatagtaattaggagataaaaagaaggaa  15757300            --------->TOE1(2)                             <---------LBD16           --------->YAB1                               <---------WRKY18(1)   --------->ARR14(2)                                   <-----------GT1   <---------ARR14(2)                                  ----------->HVH21  --------->RVE1(1)                                <---------DAG2 -------->YAB1                                     <----------DOF2                            <------ -------->AHL20(2)                              <-----------GT1                               ------- ------>AHL20(2)                                ------->TEIL       <---------DAG2          <--------- --->GT1 <---------ARR14(2)              <---------AHL20(2)        <----------DOF2  --------->WOX13(1) -WRI1   --------->ARR14(2)              --------->AHL20(2) --------->LBD16  <---------AHL20(2)   aataatatccgaatcgtgagaaaatacaaactggcccttgtttttaaatgtaactttttgaccggattactttatctcttaaatttcaatctgcttttag  15757400  Previous    Next  AGI:  At2g37520.1    Description:  PHD finger family protein. similar to PHD finger transcription factor, putative [Arabidopsis thaliana] (TAIR:AT3G53680.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18035.1); similar to predicted protein [Populus alba x Populus tremula] (GB:AAR14274.1); contains InterPro domain Acyl-CoA N-acyltransferase (InterPro:IPR016181); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011) Range:  from: 15751847    to: 15756866    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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