Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                --------->ANAC58                                              ----------->GT1                                             --------->DAG2                                      ----------->GT1                                      <------ZmHOX2a(1)                                     ----------->GT1                                    <---------TOE2(3)                       --------->MYB52(1)   ---------->DOF2 ------->DOF2    ---------->DOF2  --------->MYB52(1)              --------->GLK1(2)                 < --->YAB1     --------->TOE2(3)   ---------->DOF2                <---------GLK1(2)                  - ---YAB1     <-------TEIL    --------------->AGL15      <---------ANAC46                         <--- >YAB1  <---------ALFIN1   --------->At4g35610--------->ANAC58 ----------->ARR10               ------   taaagaaggaacacatccataaaacaaacagctaaataaaggataaaaaagcaaaattaagtggatagattcttagagaatatcacaactaaacatgttg  15743400                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                          <---------ALFIN1   <---------YAB1                                                                        <---------REM1(2) --------->YAB1           --------->ARR14(2)          --------->At4g35610       <---------YAB1 ---------YAB1            --------->GLK1(2)           <---------At4g35610       <---------TOE2(3) -------->ICU4            <---------ARR14(2)       ---------->DOF2            <---------AHL20(2) <--- ------YAB1          --------->YAB1      <-----------GT1                      --------->AHL20(2) ---- ----->GT1--------->MYB52(1)    <---------YAB1    <---------ATHB12           --------->AHL20(2) -----   tgattataaaaaaaacggtcttatcacaaatctgatgcttaattcacttcccatcaagctgaatggtccataacttgaaattaatattgtcaacacgcag  15743500    --------->YAB1 >ANAC58 >ANAC46                                                         <-------GAMYB >ANAC58                               ---------->DOF2          <---------MYB46(3) ------ARR14(2)                    ---------->DOF2            <---------ANAC58 ----->ARR14(2)                ---------->ID1                 <---------ANAC58 ----------->HVH21    < ---->GLK1(1)              <----------DOF2      --------->At4g35610     ---------->DOF2      --------   ttccactaataagtggaaatagacaaaaactttgtctcaaagaaaggagaagcagagagtttttgctcgttggcaaaagctgtgactgtgatgaagtgaa  15743600                                                                                                 <---                                                                                             ========                                                                                         --------->ARR11(3)                                                                                         <---------ARR11(3)                                                                                         --------->ARR14(2)                                                                                        --------->GLK1(1)                                                                                        <---------GLK1(1)                                                                                      <------NtERF2                                                ----------------->AGL3         --------->At4g35610                                          <------ZmHOX2a(2)              --------->GLK1(1)   ------>ZmHOX2a(1)                                         --------->ARR11(3)              <---------RVE1(1)   ========                                         --------->AGP1                 <---------GLK1(2)<---------ARR14(2)                                         <---------ARR14(2)             <---------ARR11(3)  ---------                                         --------->ARR14(2)             --------->ARR11(3) ==========                                        <---------At4g35610             --------->ARR14(2) ------>ZmHOX2a(2)                                        --------->At4g35610      <-------TEIL  <---------At4g35610 ----------DOF2                     <-----------HVH21 ---------->DOF2   <---------ARR14(2)<------ZmHOX2a(2) --->HVH21                         <----------DOF2  <---------ATHB12<---------At4g35610----------->ARR10   ggctttagcctcactagtcatgggccttgagctataactttcagatccagcccaataaaaggagcgatgcatcagatattcagatggcagagatcctaaa  15743700                                                        --------->TGA2(2)                                                       <-----------HVH21                                                      --------->ANAC55(2)                                                      --------->ANAC58                                                      <---------ANAC55(2)                     ------>ZmHOX2a(1)                --------->ANAC46                    --------->TOE2(3)                 --------->ANAC58                   ------>ZmHOX2a(2)                  <---------bZIP60(1)                 --------->ARR14(2)                   --------->bZIP60(1)                 <---------ARR14(2)                   <---------TGA1a                 <---------ARR11(3)                   --------->O2                 --------->ARR11(3)                   --------->bZIP60(2)                --------->GLK1(1)                     --------->TGA1a            <---------HSFB2a(2)                       <---------O2            <---------HSFC1(1)                       <-----------bZIP910(1)            --------->HSFC1(1)                       <-----------STF1            --------->HSFB2a(2)                  --------->ANAC46      --------->MYB46(3)     --------->TOE2(3)   --------->ANAC58   --------->HSFB2a(2)             < --------->TOE2(3)<------ZmHOX2a(2)              --------->ANAC58   <---------HSFB2a(2)             - ------AHL20(2) <---------GLK1(1)          <---------AHL20(2)     ------>ZmHOX2a(1)                <- ========================HOX2a_HOX2a      <---------AHL20(2)   <------ZmHOX2a(2)               ------ =========================HOX2a_HOX2a<---------MYB52(1)<-----------TGA1                     --------- >TOE2(3)   >>>>>>>ZML2  <---------AHL20(2)--------->AHL20(2) <---------ARR14(2)            --------- ===========================HOX2a_HOX2a--------->AHL20(2)     --------->ARR14(2)            ---------   taatctcaaccgttctagagatcctaaataatctcaaccgtttatttatttaagccacgtcatcgatcctcgcgaaaaacaaatacccatttacaagcag  15743800                                --------->At4g35610   --------->ARR14(2)      --------->WOX13(1)   <---------ARR14(2)     <---------ICU4  <---------CCA1(2)    --------->YAB1 ---------ANAC55(2)   <---------YAB1 -------->ANAC55(2) --------->YAB1 ------TEIL         <---------ICU4 ----->GT1         --------->ICU4          <---------CCA1(2)                                       -- >ANAC58       ------------>CBF <---------At4g35610                                                <- >ANAC46    <---------AHL20(2)--------->YAB1                                                      --- >ANAC58  ----------->TBP<---------YAB1   *TSS            <---------GLK1(2)                       ---   ttacatatctgtatataaacaattatcatcattcagcatcaacgcgtctctcaattctcacattctcaaaatcactaaaatcaaactcaattttcatcaa  15743900                                                                          --------->HSFC1(2)                       --------->LBD16                                    <---------HSFC1(2)                      <---------ANAC46                                    --------->HSFB2a(1)             --------->DEAR3(1)                                       ----------->ARR10             --------->RAP2.3(3)                                   <---------DEAR3(1)            --------->ATERF1(1)                                 <---------DEAR3(1)            <------NtERF2                                  ----------->ARR10            --------->RAP2.3(1)                            --------->HSFB2a(1)           <---------RAP2.3(1)                             <---------HSFB2a(1)             ----------           ------>NtERF2                                 ---------->DOF2  <---------HSFB2a(1)          <----------ID1                               <------NtERF2 <------NtERF2     <------NtERF2          <---------DEAR3(1)                          --------->LBD16<---------------------WRI1          <---------ANAC46                           <---------LBD16--------->LBD16   --------->LBD16       <-----------RAV1(1)       --------->DEAR3(2)<---------ZAT2--------->LBD16     <---------ANAC46 ------->ARR11(3)    --------->At4g35610           --------->ZAT2------>NtERF2    --------->DAG2 --------ARR11(3)    <---------At4g35610           ------>MYB83<---------LBD16  ---------->DOF2 ------>RVE1(1)      <---------LBD16   <------NtERF2<---------LBD16<---------ANAC46 <---------LBD16 ------>CCA1(1)---------->DOF2  --------->MYB52(1) ------>MYB46(1)<---------LBD16---------->DOF2    -   atatctctaatggcgccgaaagcagcggagaagaaaccggcagagaagaaaccagccgggaaagctccggcggagaaactcccaaaggcggagaagaaaa  15744000                                                                              <---------TOE2(3)                                                                              <---------TOE1(3)                                                                       <---------ARR11(3)                                                                      --------->REM1(1)                                                                   ------>ZmHOX2a(2)               <------ZmHOX2a(1)                                  --------->CCA1(2)            <------NtERF2                                         <------ZmHOX2a(2)           --------->LBD16                                       <---------ARR14(3)         --------->ATERF1(1)                                     --------->ARR14(2)         <---------LBD16                                         <---------ARR11(3)         <------NtERF2                                           <---------ARR14(2)                <-        ------>NtERF2                                            --------->AGP1  --------->GLK1(2) --  ---------->DOF2               >>>>>>>>>TBF1                    --------->ARR11(3)           <------ ->GT1 --------->ANAC46      >>>>>>>>>TBF1                       <-----------ARR10  --------->HSFB2a(2) -------->At4g35610       >>>>>>>>>TBF1                          --------->ARR14(3) <---------HSFB2a(2)   tcagcaaagacgccggaggaagcgagaagaagaagaagaaatcgaagaagagcgtcgagacttacaagatctacatcttcaaggttctgaaacaagttca  15744100                                                                                               <-----                                                                                           <---------STY1(2)                                                                                          --------->ANAC58                                                                                          --------->ANAC58                --------->LBD16                                                        --------->ZAT2              <---------LBD16                                <---------HSFB2a(2)    ---------->DOF2  --------->ARR11(3)    --------->CCA1(2)                    <---------HSFC1(1)   <------------------  <---------ARR11(3) --------->ANAC58                  --------->ARR11(3)   <------ZmHOX2a(1)  <----- --------HSFB2a(2)   --------->ANAC58       <-------TEIL     --------->HSFB2a(2) --------->TOE2(3) ------->HSFB2a(2) ---------->DOF2 <---------YAB1      <---------ARR11(3)<---------LBD16 --------->ZAT18 -TEIL   <---------GLK1(2)      --------->ICU4 <---------YAB1--------->HSFC1(1)  <-----------HVH21<--   tccagatgttggaatctctgggaaagctatggggattatgaacagtttcatcaatgacatcttcgagaaacttgctcaggaatcgtcaaagctcgctagg  15744200                                                         <---------AtLEC2            <---------------------WRI1                   ----------->RAV1(2)            <------NtERF2                                <---------ANAC58                         ---   --------->YAB1                                        <---------ANAC58                         --- -MYB46(1) ------>NtERF2                            =================RAV                      ------- ---WRI1 --------->DEAR3(2)            --------->At4g35610<---------LBD16                     ------- -MYB83 --------->At4g35610          --------->MYB46(3)  <---------ANAC46         --------->ARR14(2) -----TEIL--------->DEAR3(1)    <-------TEIL        <-----------RAV1(1)           <---------ARR14(2)<   tacaataagaagccgacgattacatcgagggagattcaaaccgctgtgagacttgtgttgcctggagaactcgctaaacatgcggtttctgaaggcacga  15744300  Previous    Next  AGI:  At2g37470.1    Description:  histone H2B, putative. Identical to Histone H2B.4 [Arabidopsis Thaliana] (GB:Q9ZUS0); similar to histone H2B, putative [Arabidopsis thaliana] (TAIR:AT3G53650.1); similar to histone H2B-like protein [Solanum tuberosum] (GB:ABB72812.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone H2B; (InterPro:IPR000558) Range:  from: 15743842    to: 15744446    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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