Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             --------->At4g35610           ----------->GT1       ------->TEIL       <---------ARR11(1)       <---------ARR14(2)       --------->ARR14(2)      <---------ARR14(1)      <---------CCA1(2)    --------->ANAC55(2)    <---------ANAC58    <---------ANAC55(1)    <---------ANAC58                                          --------->MYB52(1)    <---------ANAC46                                         <---------WRKY38(1)                   <-    <---------ANAC55(2)                       <---------HSFB2a(2)                             <------  ------>MYB83                                --------->HSFB2a(2)           --------->HSFB2a(1)    <-  ------>MYB46(1)            <---------ARR11(3)      <---------YAB1         <---------ZAT6    ------- --------GT1                 --------->ARR11(3)    --------->YAB1           --------->ALFIN1 <------- -->WOX13(1)    ---------->DOF2 <---------LBD16   <---------YAB1   ---------->DOF2         --------->YAB1 >GT1--------->LBD16    <-------TEIL    ------>ZmHOX2a(1)    <---------WRKY12             <------ZmHOX2a(2)   taccttccgtatctgctaaaaagacgttcaaggtctcgggtcctagttctcgatgataatcggccaacgtaaagacgagtgttcccatagcgatcatcat  15679400                                                  <---------GLK1(2)                                                  --------->ARR11(3) --------ANAC58                      ---------->DOF2          --------->ARR14(2)         --------->ANAC55(2) ---ICU4                         <----------ID1   <---------ARR11(3)                     --------->ANAC58 --------ANAC58                <---------------AtSPL8      --------->YAB1                --------->ANAC58 -->YAB1    --------->ANAC58  --------->DAG2 ----------->RAV1(1)                         ----------->GT1 --YAB1     --------->ANAC58 ---------->DOF2--------->MYB46(3)<---------ARR14(2)         <---------ANAC55(2)   agcgaggcattgtcaagctacaaaatcaaaaaaaagggacaaagaaaccacagatttttgagcataacctgttagaaactataaaacaagaacgtaacaa  15679500                                                  <---------AHL20(2)                                        ------>NtERF2                                       --------->RAP2.6(2)                               ---------->DOF2 ----------->GT1           ---------->DOF2            -                       ---------->DOF2 --------->ANAC58              ----------->GT1          <------              <---------ARR11(3)       --------->ANAC58        --------->ANAC58               <------  <-----------GT1   --------->YAB1     --------->ANAC46        --------->ANAC58 ---------->DOF2 <----   aaattcactaactcaagacctataaaaaagccccaaagaagacgccatttagttaattcagagacaaggaagcgataaatcggaaagacagaagctaagg  15679600                ------->TEIL         <-----------RAV1(2)                 --------->ZAT14        --------->LBD16                      --------->ZAT2       --------->DEAR3(1)                    <---------ZAT14    <---------ALFIN1              --------->YAB1  <-----------HVH21          --------->AHL20(2)      --------->ANAC58 --------->AtMYB61    --------->MYB46(3)  <---------ANAC58 -------->MYB46(3)<---------MYB52(2)      <---------ANAC58 ---TOE2(3)<---------At4g35610    ----------->GT1    --------->ANAC58      --------->YAB1           - ---TOE1(3)--------->At4g35610<---------AHL20(2)   ---------->DOF2       ------->TEIL --------->At4g35610 --ZmHOX2a(1) <-------TEIL --------->AHL20(2)<---------ZAT2           <---------YAB1  <---------At4g35610   aaaccatcaccgcagatgcatcgaaccaatataaaatcgtaattccgagcagtgaaagcactaaatttcaatatgaatcatcgaattgagcagagtttcg  15679700                               --------->ANAC55(2)                               --------->ANAC55(1)                               <---------ANAC55(2)                               --------->ANAC58                                 ---------->DOF2                               --------->ANAC58                                *TSS                  <---------ZAT18                                            --------->At4g35610                  --------->ZAT14                                            <---------At4g35610              <------ZmHOX2a(1)--------->ANAC46                            <--------P   --------->LBD16<---------ZAT14  --------->ANAC58    --------->DAG2   --------->DAG2 <---------LBD16  --------->ZAT18  --------->ANAC58  ---------->DOF2   --------->SPL7 ---------->RAV1(2)           <---------LBD16<---------LBD16         <---------SPL7   atacctggggattgaaggagagcactgcgaaacacggaagccctaatttcggaaggaaaggggaagaacagcgtaaggtagctaaagtatggttttcaag  15679800                                                                                  <------MYB46(1)                                                                                  <------MYB83                                                                             --------->ATHB51                                                                             <---------ICU4                                                                             <--------ATHB1                                                                             <---------AHL20(2)                                                                       ------->GAMYB                                                                       ----------->GT1                                                                    --------->MYB52(1) <---------ANAC46                                                           ------>MYB83--------->TOE2(3)                               <----------ID1              ------>MYB46(1)   --------->AHL20(2)                      ------>NtERF2                      --------->DEAR3(1) <---------ATHB51        -              <-----------RAV1(2)                       --------->DEAR3(2)  --------->ICU4         --   <---------YAB1    ----------->HVH21                --------->ARR14(2)  --------->YAB1          ---   ----------->TBP --------->At4g35610                <---------ARR14(2)--------->At5g28300   ------>ZmHOX2a(1)   tgtttataaatgggcttcagacgctgacagaaaaaaacaaaaatgggcttcagacagaaccgactaaatccaacggtaataatttggtgttgtgtcctaa  15679900             --------->TOE2(3)             --------------->AGL15             <---------------AGL15          <---------AHL20(1)          --------->AHL20(1)          <---------ARR11(3)          --------->ARR11(3)         --------->RVE1(1)         --------->CCA1(1)    --------->At5g28300   ----------->GT1                                                                         <---------AHL20(2)   ------->GAMYB                                                              --------->YAB1 ------>MYB83<----------DOF2                                                <---------AHL20(2) ------>MYB46(1)              --------->GLK1(2)<-----------GT1              --------->AHL20(2) -------->MYB52(1)       --------->CCA1(2)  --------->ARR14(2)  <---------MYB52(1)         --------->AHL20(2) ------->AtMYB61       --------->CCA1(2)    <---------ARR14(2)<-----------RAV1(1)<---------ICU4 ------>MYB46(3)  ---------->DOF2  <-----------RAV1(1) <-----------GT1     --------->YAB1 --------->AHL20(2)   accaacggtaaatatctttaaaaagagataagaatcgatgttgccatattcaccattttgcaatctgttgggccttatattaataaggcccatttaattt  15680000                                                                       <---------ALFIN1                                                                      <---------ZAT18      ----------             --------->YAB1                                           --------->ZAT18   <---------ANAC58     ----------->GT1  <---------MYB46(3)    <---------AtLEC2    <-----------RAV1(1)     <---------ANAC58   gtgtaaattgtaaaataagaatggtggtttacaaattgcaagttttgtatgtctcggtattcttctatgttgcacactctgatcacatttgcttaaagac  15680100                                                     <-----------GT1                                                    <---------YAB1       <---------ICU4                                                  <---------ICU4   ------>ZmHOX2a(1)                                                  --------->YAB1 ------>ZmHOX2a(2)                              --------->ARR11(3) <---------YAB1 <------ZmHOX2a(2)               ----- --------->YAB1              <---------CCA1(2)<-------TEIL     --------->ARR14(2)              ------ >DOF2--------->ICU4 <---------ZAT14   --------->AtLEC2        <---------ARR14(2)         <---------ARR11(3)   taatagtaatgagttatccagactaaactatatatctagttatgcaaattcattataacaaattggatcctctaatctttaaaaacttacaacatctaaa  15680200                                                                                 --------->WRKY12                                                                                --------->DOF5.7(2)                                                                            <---------At5g28300      --------->ARR14(2)                                                   <-----------GT1      <---------GLK1(2)                                           <------ZmHOX2a(1)      <---------ARR14(2)                                          --------->YAB1<---------MYB52(1)    ----------->ARR10                                          --------->HSFB2a(2)                 <- ---->DAG2                                                     <---------HSFB2a(2)  ----------------- ---->DOF2                                                     --------->HSFC1(1)--------->WRKY38(1)   agtgatcagatttgttatgacatctatctatttatgcatagtttatgacatctatcttctaccttctaggataaattttaccgtttaccaattcatgtta  15680300  Previous    Next  AGI:  At2g37340.1    Description:  RSZ33 (ARGININE/SERINE-RICH ZINC KNUCKLE-CONTAINING PROTEIN 33); nucleic acid binding / nucleotide binding / zinc ion binding. similar to RSZ32, nucleic acid binding [Arabidopsis thaliana] (TAIR:AT3G53500.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN60012.1); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878); contains InterPro domain RNA recognition motif, RNP-1; (InterPro:IPR000504); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677) Range:  from: 15677226    to: 15679779    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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