Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   <----------DOF2                <---------DAG2                                             <---------LBD16          --------------->AtSPL3                                        <---------HSFB2a(1)         ----------->RAV1(2)               --------->GLK1(2)--------->ANAC58          --------->AHL20(1)         <---------At4g35610         --------->ALFIN1       --------->ANAC55(2)       <---------AHL20(1)         --------->At4g35610       ------>ZmHOX2a(1)        <---------ANAC55(2)       --------->AHL20(2)     --------->GLK1(2)           ----------->RAV1(2)        --------->ANAC58 --------->LBD16     <---------ARR14(2)       --------->ZAT2      <---------AHL20(2)    <---------GLK1(1)     --------->ARR14(2)       <---------ZAT2     --------->AHL20(2)    --------->GLK1(2) -->TEIL --------->ZAT2       <---------At4g35610--------->AHL20(1)    <-----------ARR10 ----CCA1(2)  ------->TEIL    --------->At4g35610<---------AHL20(1)   <---------GLK1(2)        ------   tctagcgaatcagctgtacctttccctattccagctcctgtggagaatcaatataatctagtaagtaatctagaatctccgtattcaatataatatagaa  15648600                                                                <------NtERF2                                         <---------DDF1       --------->DEAR3(1)                                         <---------RAP2.6(3)------>NtERF2                             <---------LBD16               --------->ANAC58                           <---------ARR14(2)              --------->ANAC58                           --------->ARR14(2)        <---------ZAT18                          <---------HSFC1(2)       --------->ANAC46                        <---------WRKY18(1)                          <---------HSFB2a(1)      --------->O2--------->LBD16             <---------                          --------->HSFB2a(1)      <---------DEAR3(1)                     -----------                          --------->HSFC1(2) --------->ANAC58 <---------ANAC46            --------->WRKY38(1)                          --------->ZAT2 ------>NtERF2 ------>NtERF2                      --------->WRKY12                          --------->At4g35610--------->ANAC58<---------LBD16            --------->CCA1(2)                   --------->LBD16      --------->RAP2.6(2)--------->ANAC46          ----------->ARR10                 <---------LBD16        <---------ETT(1)  --------->SPL7       ---------->DOF2                --------->MYB52(1)      ----------->HVH21<---------ATERF1(1) --------->ANAC58    <---            <---------At4g35610 <---------MYB52(1)<---------LBD16            --------->ANAC46 <------ ---->DOF2  --------->At4g35610--------->LBD16   <---------ALFIN1            --------->ANAC58--------   agagaagacacttaagctcaccggaagaagctccggtaatggccgacacgaccacggcgctacgccggagagagacactacgaaagtgagatttgaccga  15648700                                               <------NtERF2                                               <---------At4g35610                                               <---------ZAT14                                               --------->At4g35610          ------>NtERF2                                               <---------ZAT2              --------->DEAR3(1)     <------ZmHOX2a(1)                         --------->ZAT14           ------>NtERF2  <---------LBD16                           <---------At4g35610       <---------ATERF1(1) --GT1                                <---------ZAT2                 <---------DEAR3(1) >HVH21                               --------->At4g35610            --------->DEAR3(1)         <---- ------KAN4(2)                        <---------At4g35610     ----------->HVH21            >>>>>>>>>> ---MYB59                             --------->ZAT2       ------->TEIL --------->DEAR3(1)------->GAMYB >ZAP1<---------------AtSPL3------->TEIL    --------->At4g35610   ------>ZmHOX2a(2)      --------->MYB46(3)   ataaccaggaagtactgtccctaatccatgaatcgtcttcagcttcggctgcagagtaatggacgtgatcgtcgacgacgacgagagagcaatcgccatt  15648800                                                                                                    <                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                 <---                            --------->YAB1                                   <---------ANAC46    <---             <---------At4g35610                                     <-------GAMYB               ----          ---------->DOF2   <---------ICU4                           ================================      --------->LBD16    <---------ICU4                             --------->MYB52(2)           ----     <---------HSFB2a(2) --------->YAB1                             <------MYB83                 ====     --------->HSFB2a(2)--------->ICU4                              <------MYB46(1)          <------- <---------ANAC46       <---------YAB1                              ----------->GT1    <------MYB83-- <---------ANAC58     --------->YAB1                                <---------MYB46(3) ----------->GT1 <---------ANAC58   --------->AHL20(2)    *TSS                    <---------MYB52(1)   <------MYB46(1) -------RAV1(1)----------->GT1        <---------AHL20(2)         <-------GAMYB        --------->MYB59 >>>>>>>LFY  --------->At4g35610     --------->AHL20(2)          ====================================   gttgcttccagagaaagctgaaaataataataatcccaatttaaaatcgaaatcgattttctcataccgttggttaatctcgtggagttgggttattaca  15648900                                                 --------->At4g35610                                                 <-------GAMYB                                                --------->MYB52(2)                                            --------->ANAC46                                            --------->ANAC58                                            ======================bZIP_DOF         --------->bZIP60(1)                =======================================bZIP_DOF    --------->At4g35610                     --------->bZIP60(1)    <---------At4g35610                     <---------O2  <-----------RAV1(2)                       <<<<<<<<<<AtbZIP1 -----------HVH21                           --------->bZIP60(2) -----MYC4                                  ================================================bZIP_DOF ---->MYC3                                  --------->ANAC58 ----->ABF1                                 --------->O2 -----MYC3                                  --------->TGA1a -----MYC2                                  <---------bZIP60(1) ---->MYC4                                  =============MYC_MYB ---->MYC2                                  <---------TGA1a ----->TGA1a                           --------->ANAC46 ----->O2--------->TGA2(1)             --------->ANAC58 ------O2<---------bZIP60(1)           --------->ANAC58 ------ANAC55(2)                      ------->MYC3 ------TGA1a                     <-----------HVH21     <----------DOF2 ----->ANAC55(2)               --------->DAG2<-----------TGA1 ======MYC_MYB       ------>ZmHOX2a(2)<-------MYC3<---------MYB52(1) ----->ANAC46      <---------ARR11(3)--------->At4g35610                         ---------->DOF2    - ========================================bZIP_DOF<---------At4g35610         --------->GLK1(2)    <-- ----GT1 <---------REM1(1)    ---------->DOF2<-----------HVH21              <---------GLK1(2)  <----- --------->HVH21   --------->ARR11(3)<---------At4g35610                ---------->DOF2        <----- ======MYC_MYB --------->YAB1 ========================bZIP_DOF       <----------ID1  *TSS     <------   cgtgtcagatgatgtaaccatgatctcagagaaaaagtcacatgccacgtcagttaactttagggcaaaatgggaaaagaatctaaagagcatatgttcg  15649000                                                                                                -----  <-------MYC4                                                                                ------>ZmHOX2a(2)  ------->PIF5                                                                               ========  ------->MYC3                                                                               <------ZmHOX2a(2)  <-------MYC3                                                                              ---------  <-------MYC2                                                                              <--------  <-------PIF5                                                                              <--------  ------->MYC2                                                                              --------- --------->ANAC58      ---------->DOF2                                             --------->ALFIN1 --------->ANAC58  <---------At4g35610                                           <---------ANAC58 ------>TEIL       --------->At4g35610  <---------CCA1(2)                        <---------ANAC46  -- -------ZAT18   <--------P        --------->RAP2.6(2)                 <---------ANAC58      --------- ----ANAC58  <---------TOE1(3) --------->ANAC58                       <---------ANAC58      <-------- ----ANAC58  <---------TOE2(3) --------->ANAC58                       <---------ANAC46    ----------- -TEIL      <---------ANAC46   --------->ANAC46           <----------DOF2        <---------ANAC58 <--   tgcacgttcttgtttagggtaagctcaaagctcaagccgcttctatctctctacatttctctttctgcaatggcgagattagtgcgtgtggctagatcct  15649100                                                                                         --------->At4g35610                                                                                         <---------ZAT2                                                                                         --------->ZAT2                                                                                       <------NtERF2                                                                                      --------->LBD16                                                                                     <---------DEAR3(1)                                                                                     <---------ANAC46                                                                                     --------->ALFIN1                                                                                    --------->At4g35610                                                                                    <---------At4g35610                                                                                    <---------LBD16                                                                                    --------->ATERF1(1)                                                                                    <----------------                                                                                    <------NtERF2                                                              <------NtERF2         <---------ABI4(1)                                                             ------>NtERF2         <---------DEAR4(2)                                                            --------->DEAR3(1)     <---------ERF1                                                           <------NtERF2           <---------RRTF1(1)                                                           --------->ATERF1(1)     <---------RAP2.3(1)                                                         <---------DEAR3(1)        ------>NtERF2                                                         --------->DEAR3(1)        <---------RAP2.6(1)                                                        <------NtERF2              <---------ORA47(2)                                                       <-----------HVH21          <---------RRTF1(2)                                                     ------->MYC3                 <---------DREB2C(2)                                                     <-------MYC3                 <---------RRTF1(3)                                                    <---------ALFIN1              <---------RAP2.3(2)                                                    --------->TGA1a               <---------RAP2.3(3)     <----------DOF2                                <---------TGA1a               <---------DEAR3(1) ->ZmHOX2a(1)                                       --------->ANAC46              --------->DEAR3(1) =====HOX2a_HOX2a                                   --------->ANAC58              <---------ATERF1(2) >ARR14(2)                                          <---------O2                  <---------RAP2.6(2) -GLK1(2)                             --------->At4g35610<---------O2            <---------ABI4(1) -ARR11(3)             <-----------ARR10            --------->ANAC58           --------->ANAC46 >ARR11(3)            <---------MYB52(1)            --------->O2            <---------REM1(2) ---->ZmHOX2a(1)   <------------MYB.PH3(1)     --------->ANAC58         --------->ARR14(2)         <- >AGP1     <----------DOF2            <---------At4g35610--------->O2   <---------ARR14(2)   -------- -ARR14(2)<---------ANAC58  --------->ANAC46   --------->ANAC58 <---------ATERF1(1)<---------ATERF1(1) >ARR10   <---------ANAC58<-----------GT1   --------->ZAT2<---------ATERF1(1) <---------LBD16<------- -------ALFIN1     ===========================================MYC_MYB  <---------MYB52(1)<---------At4g35610   cctccctctttggctttggtaaccgtttctactctacttcagccgaagctagccacgcgtcgtcgccttcgccgtttcttcacggcggcggagctagcag  15649200                           <------MYB83                                                            ==                           <---------ANAC58                                                        --                           <------MYB46(1)                                                   <-------                           <---------ANAC58                                      <-----------GT1   ==      --------->LBD16     --------->MYB55(2)            --------->DAG2   <---------ZAT18     <------- -----WRI1                <---------MYB46(3)           ---------->DOF2   --------->ZAT18  <---------DEAR3(1) -------P                --------->ALFIN1       --------->ALFIN1  --------->ANAC46       <---------HSFB2a(2) ->ZAT2     --------->CCA1(2)                ------>ZmHOX2a(1)    --------->ANAC58       --------->HSFB2a(2) --ZAT2---------->DOF2 <---------ANAC46 --------->GLK1(1)         --------->ANAC58-------->P<------NtERF2   ggttgctccgaaagatagaaatgttcagtgggtgtttttgggatgtcctggtgttggaaaaggaacttacgctagtagactatcaacccttctcggcgtt  15649300                         --------->LBD16                  ------>ZmHOX2a(2)            --------->LBD16           --------->DEAR3(1)           --------->ATERF1(2)          --------->DEAR3(2)     <---------ANAC58          <------NtERF2 <---------ANAC58          --------->ATERF1(1)    <---------ANAC58         <---------ATERF1(1)   <---------ARR11(3)        --------->DEAR3(1)     --------->ARR11(3)        <---------ALFIN1<---------ANAC58                               <----------DOF2  <---------O2   <------ZmHOX2a(2)                                    <---------DAG2  --------->O2  --------->ARR11(3)                                ----------->HVH21 =======================HOX2a_HOX2a            ------->TEIL      <-------TEIL ---->ZmHOX2a(1)<---------ARR14(2)          --------->HSFB2a(2) --------->ALFIN1 --ANAC58------>NtERF2  <---------ANAC46  ----------->RAV1(2)--------->DAG2 ========================HOX2a_HOX2a  ------->TEIL         ---------->DOF2    <-----------GT1  <----- --ANAC58--------->MYB52(1)--------->REM1(2)<---------HSFB2a(2)--------->TOE1(2) <----------DOF2 <---   cctcacatcgccaccggcgatctcgtccgtgaagagcttgcatcttctggacctctctctcaaaaggtgcgacctttttttttctttcccattttctgtt  15649400                                                                                            ------>ZmHOX2a(2)                                                                                           --------->At4g35610                                                                                           <---------At4g35610                                                                                          --------->ARR14(2)                                                                                          <---------ARR14(2)                                                                                    <---------ICU4                                                                                    --------->ATHB12               <---------GLK1(2)                                                    --------->ATHB51               <---------ARR14(2)        ------>ZmHOX2a(2)                         <---------YAB1       <---------YAB1   <----------DOF2  <-------TEIL                              --------->ICU4 <---------YAB1--------->ARR14(2)       <------ZmHOX2a(2)                        --------->YAB1 ----MYB52(1)----------->ARR10         --------->ARR14(2)                     <----------DOF2       < ------At5g28300--------->GLK1(2)      <---------ARR14(2)          <---------At4g35610    <---------AGP1   actgtgattctgatggagattctcttctttgttcgattttggatccatatagtctgaaattgaatgtttagctaatcggactttcattattggatctgaa  15649500  Previous    Next  AGI:  At2g37240.1    Description:  antioxidant/ oxidoreductase. Identical to UPF0308 protein At2g37240, chloroplast precursor [Arabidopsis Thaliana] (GB:Q9ZUU2;GB:Q94A62); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G65840.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18054.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; (InterPro:IPR000866); contains InterPro domain Thioredoxin fold (InterPro:IPR012335) Range:  from: 15647018    to: 15648842    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g37250.1    Description:  ADK/ATPADK1 (ADENOSINE KINASE); adenylate kinase/ nucleotide kinase. Identical to Probable adenylate kinase 1, chloroplast precursor [Arabidopsis Thaliana] (GB:Q9ZUU1); similar to adenylate kinase family protein [Arabidopsis thaliana] (TAIR:AT2G39270.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41541.1); contains InterPro domain Adenylate kinase; (InterPro:IPR000850); contains InterPro domain Adenylate kinase, subfamily; (InterPro:IPR006259); contains InterPro domain Adenylate/cytidine kinase, N-terminal; (InterPro:IPR011769) Range:  from: 15648985    to: 15650865    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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