Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 ----------->HVH21                                                                             <---------ANAC58                                                                             <---------ANAC46                                                                             <---------TGA1a                                                                             --------->TGA1a                                                                             <---------ANAC55(1)                                                                             <---------O2                                                                             --------->O2                                                                             --------->TGA2(1)                                              <---------AHL20(2)             --------->bZIP60(1)                                              --------->AHL20(2)             <---------bZIP60(2)                                              --------->AHL20(1)             <---------ANAC58                                         <---------WRKY12                    <---------ANAC55(2)                                       --------->At5g28300                   --------->ANAC55(2)                                       <-----------HVH21                  ----------->TGA1                                      ------->GAMYB <---------ANAC58   <---------AHL20(2)          --                                      =================================================MYC_MYB    ---                                      ----------->GT1                 --------->AHL20(2)        <----                                    <<<<<<<<<<<<WRKY18                --------->AHL20(1)   <---------DEAR3(1)        --------->ANAC55(2)        <---------DOF5.7(2)         >>>>>>>>>MYB98<---------bZIP60(1)----- -------AHL20(2)                   --------->MYB52(1)         --------->MYB52(1)          --------->SPL7 -------YAB1  <-----------GT1     <---------WRKY38(1)       <---------MYB59 ----------->STF1 -------- ------>AHL20(2)   <----------DOF2<---------WRKY12  <---------ANAC58  <---------AHL20(2)----------->HVH21   ataattgctcacgttttatcggtttttggttttttgtcaacggtcaaattttttgggtgatgcctaacaaaatttaatgacgtgactcttgggacggtga  15624400                                                                                             --------                                                                                             <-------                                                                                      --------->AHL20(2)                                                                                   ----------->GT1  --------->ZAT6                                                                  ----------->GT1 ------->WOX13(1)                                                             <------ZmHOX2a(1) <---- --->ZmHOX2a(2)         <---------AHL20(2)                                   --------->LBD16<-------- -----ARR11(3)       ----------->GT1    <---------At5g28300                <---------LBD16--------->AHL20(2) ---->ARR11(3)   --------->GLK1(2)     <-----------GT1              <-----------GT1--------->TOE2(3) ->At5g28300 <-----------GT1       --------->AHL20(2)  <-----------GT1 <----------DOF2<---------AHL20(2)   tctatcagtagcatttaacaatctagttatttggaaatgaattacagtatgagatttatactatttgtataaacttttcaggaaatgttaaattatatct  15624500     <---------RVE1(1)     <---------CCA1(1)    <---------ARR11(3)                                         --------->AHL20(2)            --------    --------->ARR11(3)                                         <---------AHL20(2)         <---------- <------ZmHOX2a(1)                                            --------->AHL20(2)       --------->MYB52(2) ->ARR11(3)                                                <---------AHL20(2)        <---------MYB52(1) --ARR11(3)                                                --------->AHL20(1)       <----------DOF2 ------DOF2                      <---------GLK1(2)         --------->AHL20(2)  <---------GLK1(1) -CCA1(2)                      <---------TOE2(3)          --------->AHL20(2)   --------->GLK1(1)-----   ttaggagattttttgtattggttctcactgatttagattatcaagttactgagataaaaaaaaaattaatacttgttttagatttcctttagttaccact  15624600                             --------->ZAT6                          <-----------GT1  ------>MYB46(1)      <---------ICU4  ------>MYB83  ------>MYB83        --------->AHL20(1)                                    XXXXXXXXXXXXXXXXXXXX>MIR849 ->ZAT6               --------->AHL20(2)                               ---------->DOF2 -GT1  <----------DOF2<---------AHL20(2)                            --------->TOE2(3)           ----- ------>HVH21        --------->AHL20(2)------>MYB46(1)       --------->AHL20(2)  --------->TOE2(3)---   gaccaacttctttagcaaaaaaaaaaaattaccactaaaccaacttatgcattcgttacaaaaaaaaataccataaaacaaaacatcaatgttgtaagtt  15624700                                                          ---------->DOF2                                                         <---------AHL20(2)               --------->ANAC58                                                       ----------->TBP                    --------->ANAC58                                                     --------------->AGL15                --------->ANAC46                                                     <---------------AGL15              ---------->DOF2                                                    <-----------------AGL3             *TSS                                                    ----------------->AGL3            ------->GAMYB -                                                    =================================================         --------->YAB1                        --------->ZAT18                        --------->AtMYB61     <---------AHL20(2)                        <---------ZAT18               <---------At4g35610    <    --------->AHL20(2)   ----------->RAV1(1) --------->At4g35610  <----------DOF2    --------->MYB46(3) ------>GT1---------->DOF2 --------->ZAT6    <---------At4g35610 --------->TOE2(3)--------->MYB46(3)< -------->HVH21----------->GT1              <---------ARR11(3) ------->TEIL  --------->At4g35610 ----   gtgacattaaatcaaaagtgtcaaaatcaacagtagcacaaaccaagagctcactctatataaagaacctttattcttcatctcacaaccacaagcccta  15624800                                                                   --------->ALFIN1         --------->ANAC58                                        <---------bZIP60(2)         --------->ANAC58                                        --------->O2       ---------->DOF2                                           <---------TGA1a    --------->TOE2(3)                                            <---------ANAC46    ------->GAMYB                                                <---------O2   --------->MYB46(3)                           <-----------------AG     <------ZmHOX2a(1)  -------->P                          --------->HSFC1(2)         <---------ANAC58          <---------TGA1a ------->GAMYB                        <---------HSFC1(2)         <---------ANAC58          --------->TGA1a -------->MYB46(3)               --------->HSFB2a(2)        =========================================bZIP_DOF =================================================================MADS_MADS     <---------WOX13(1) ---------MYB55(2)               <---------HSFB2a(2)        ---------->DOF2  ----------->HVH21 ---------MYB111(2)        ================================================bZIP_DOF <---------GLK1(1) ----->REM1(1)             ---------->DOF2<-------TEIL      ===============bZIP_DOF --------->GLK1(1)   caacaaccacaaagcaaaacacttacttagaaagtccagaaacatccattaacacatatggctaaagacgtggaaggacctgatggatttcagacgagag  15624900                  <---------ALFIN1                ------>NtERF2                ----------->RAV1(1)               --------->DEAR3(1)             --------->LBD16             ------>NtERF2            --------->DEAR3(1)            --------->ANAC46           <---------LBD16          ------>ZmHOX2a(1)        =====================================HOX2a_HOX2a        ------>ZmHOX2a(2)       <------ZmHOX2a(2)      <---------GLK1(2)      <---------ARR14(2)      <---------ARR11(3)                                                     ------>NtERF2      --------->ARR14(2)                                                    --------->DEAR3(1)      <---------ARR14(3)                --------->At4g35610              --------->DEAR3(1)      --------->ARR14(3)                <---------At4g35610         <-----------HVH21      --------->ARR11(3)               <-----------ARR10         --------->ZAT14     --------->HSFB2a(1)              <------ZmHOX2a(1)          <---------ZAT14                -----     --------->GLK1(1)         --------->ANAC46                  <---------ZAT18             --------    ----------->ARR10  <---------MYB52(1)              <----------DOF2<---------WRKY38(1) <---------ALFIN1   attacgaagatcctccgccaacaccgtttttcgacgcagaggagcttaccaagtggtctttatacagagcagtcatcgccgagttcgtagccactctcct  15625000                                                                                <------NtERF2                                                                              --------->O2                                                                              <---------ANAC46                                                                              <---------DEAR3(1)                                                                              --------->DEAR3(1)                                                                              <---------O2                                                                             --------->ATERF1(1)                                                                             <------NtERF2                                                                             --------->RAP2.3(1)                                                                             --------->RRTF1(1)                                                                            <---------ERF1                                                                            ------>NtERF2                                                                            <---------ORA47(2)                                                                            <---------ATERF1(1)                                                                            <---------RAP2.3(1)                                                                            <---------DEAR4(2)                                                                           <---------DEAR3(1)                                                                           <---------RAP2.3(3)                                                                           <---------ANAC46                                                                           --------->DEAR3(1)                                                                          <---------ABI4(1)                                                                          ------>NtERF2                                                                          --------->ATERF1(1)                                                                          <------NtERF2                                                                         <---------ATERF1(1)                                                                         <---------RAP2.6(1)                                                                         ------>NtERF2                                                                         <---------RAP2.3(1)                                                                         <---------RRTF1(1)                                                                        <---------RRTF1(2)                                                                        <---------RRTF1(3)                                                                        <---------RAP2.3(2)                                                                        <---------DEAR3(1)                                                                       <---------LBD16                                                                       <---------At4g35610                                                                       --------->At4g35610                                                                       <---------ZAT14        ----------->HVH21                                         --------->WRKY38(1)        --------->TGA2(2)                                         --------->WRKY12       <-----------HVH21                                          ----------->HVH21      --------->ANAC55(2)                                         --------->ZAT18                   -      --------->ANAC46      ----------->GT1                     --------->At4g35610    --------->ATHB12      --------->ANAC58  --------->ATHB12                 <---------DREB2C(2)<---------RRTF1(1)    <--      --------->ANAC58<-----------HVH21      --------->ANAC46   <---------At4g35610  <---------ARR14(2)     ------->TEIL    ------->GAMYB           <---------ETT(1)  <---------ANAC46------>NtERF2      <--     --------->SPL7 <------------AtMYB77    --------->SPL7  --------->ALFIN1<---------RAP2.6(1)   <-- <---------------AtSPL3<---------YAB1  <-------TEIL ---------->DOF2   <-----------RAV1(1)         <-- ->ZmHOX2a(1)     <-----------GT1     --------->GLK1(2)  <---------DEAR3(1)<---------RAP2.3(2) <----- --------------->TaNAC69(2) <---------MYB46(3)----------->RAV1(1) <---------ZAT14    --------->ARR14(2)   cttcttgtacgtcaccgttttaactgtcattggttacaagattcagtccgacacaaaagccggtggagttgactgcggcggcgtcggaatccttggcatc  15625100                                               <---------CCA1(2)                                              <---------MYB52(1)                                             <---------DEAR3(2)                                          ------>NtERF2                                          --------->ABI4(1)                                         --------->DEAR3(1)                                         <---------ALFIN1                                        --------->MYB46(3)                                        --------->DEAR3(2)                                        --------->DEAR4(2)                                        --------->ATERF1(1)                                        --------->ORA47(2)                                       <---------ATERF1(1)                                      <---------ALFIN1                  <---------ARR11(3) --------->ZAT14     <----------DOF2------>ZmHOX2a(2)--------->ZAT18 -------->ALFIN1  --------->ARR11(3) <---------ZAT14                 --------->ARR14(2) -------O2   <------NtERF2 <---------ANAC58 --------->ATERF1(2)      <---------ARR14(2)   --------->LBD16 -------ANAC58<---------ANAC58     --------->ANAC46  <---------TOE2(2)                  <---------LBD16 -------ANAC46<---------ANAC58    --------->At4g35610<---------TOE1(2)               <-----------GT1 -------ANAC58<---------ANAC46  --------->ETT(2)    <-----------RAV1(2)       ----------->GT1 -NtERF2<---------AtMYB61  <---------ANAC58<---------LBD16 --------->YAB1 <-----------HVH21  <-------TEIL   gcgtgggcttttggtggcatgatcttcatccttgtctactgcaccgccggtatctcaggtatcatatatcgaaaccggtccggtttattacccggttcag  15625200                                                                                                    <                                                                                   <---------ANAC55(2)                                                                               <-----------HVH21    <                                                                              <---------MYB46(3)    <                                              --------->AHL20(2)           <------MYB83             <                                              <---------AHL20(2)           <------MYB46(1)          <                                             <---------AHL20(1)      ================================               ------->TEIL                  --------->AHL20(2)      <----------DOF2             ----             <---------ZAT18                 <---------AHL20(2)   <---------ARR11(3)             ----     <---------TOE2(3)          ------>ZmHOX2a(1)           =========================================    <-----------GT1             <----------DOF2             ------->GAMYB <---------AtMYB61   <------   <-----------GT1<----------DOF2      ----------->GT1   <-----------GT1  --------->MYB111(1)--------  --------->AHL20(2)         ---------->ID1  --------->AHL20(1)   --------->ARR11(3)         <-------   aaaatttaacatttgtggacctttcaaatttgtcctttgttttgtaatttatttgaaattaaccccaagaactttgtaggtggtcacataaaccctgcgg  15625300  Previous    Next  AGI:  At2g37180.1    Description:  RD28 (plasma membrane intrinsic protein 2;3); water channel. Identical to Aquaporin PIP2-3 (PIP2-3) [Arabidopsis Thaliana] (GB:P30302;GB:Q8L5V1); similar to PIP2B (plasma membrane intrinsic protein 2,2), water channel [Arabidopsis thaliana] (TAIR:AT2G37170.1); similar to Plasma membrane aquaporin 2b [Raphanus sativus] (GB:BAA92260.1); contains InterPro domain Aquaporin; (InterPro:IPR012269); contains InterPro domain Major intrinsic protein; (InterPro:IPR000425) Range:  from: 15624787    to: 15626234    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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