Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               ----------->HVH21           <---------ANAC46           --------->ANAC55(2)           <---------ANAC58           <---------ANAC55(1)           <---------ANAC55(2)         <-----------GT1                               <---------HSFC1(1)       <---------GLK1(1)         ---------->ID1        --------->HSFB2a(2)       <----------DOF2          <-----------GT1        --------->HSFC1(1)                           <   <------MYB46(1)<---------ANAC46       <----------DOF2       <-----------GT1                      <   <------MYB83   <---------ANAC58      <XXXXXXXXXXXXXXXXXXXXMIR835-3P                            <-- --------->ALFIN1 <---------ANAC58   <----------DOF2   <---------HSFB2a(2)                     ------ <--------P<---------ANAC58 <---------AHL20(2)    <---------AHL20(2)                   <----------DOF2   aaggttgggatttacgtgatgcgtttacattttttttctctttcttttgtattttttcgagaaatttacattgaaacgattactatattctttgctggat  15599200              <---------At4g35610          --------->ARR14(2)          <---------ARR14(2)         --------->HSFC1(2)         <---------HSFC1(2)                                          ----------->HVH21         --------->HSFB2a(1)                                       ----------->RAV1(2)         <---------HSFB2a(1)                                    <---------PCF2        ----------->ARR10                              <---------ARR14(2)    <---------HSFB2a(2)                                --------->ARR11(3)    --------->HSFB2a(2)                                --------->ARR14(2)   <---------LBD16                                     <-----------ARR10 ---------ANAC58                          <----------DOF2     <---------MYB46(3) --------->AHL20(1) ---------ANAC58                      <----------DOF2  --------->GLK1(2)         <---------AHL20(1) -------AHL20(2)             <----------DOF2          <---------ARR14(1)        --------->ICU4 --->ARR14(2) --------->At4g35610---------->DOF2      <---------GLK1(2)    ----------->GT1      -----   ttacttggggaagtttcgctgaaatttagagctttaaaagctttctttatcgtagagaatcttgtggttccctgaccatgtaatatttttcaattgtcct  15599300                                   <---------ZAT18           ------->TEIL            <---------ZAT14           <-----------GT1     --------------->AtSPL3        ----------->GT1        --------------->AtSPL8   --------->YAB1              <---------TOE1(2)  ----------->HVH21         <---------ANAC58             ---------->DOF2                          <-- ->ZmHOX2a(1)               <---------ANAC58  --------->ANAC46 <----------DOF2        <---------MYB52(1)   atctatgacaatgtaactaaacaaacaatttcgttcgtacacttatacactaaacaaaaaaaagtctttgatatagttttatttttctgttatgccaact  15599400                                              ------>ZmHOX2a(1)                                             --------->TOE2(3)                                          <-----------GT1                                     --------->ARR11(3)                                     --------->AHL20(1)                                     <---------ARR11(3)                                    --------->CCA1(2)                                   <---------ARR11(3)     <---------AHL20(2)                                   --------->ARR11(3) <---------ANAC55(2) --------->AHL20(2) -------YAB1        --------->REM1(1)<---------AHL20(1)   --------->AHL20(2)                        -   atgtttgtgttcttaaaattctacatctctaaaaacagatatattttccttatattacataaaaatggtttacccataaattgatgagttttatcaagag  15599500                     --------->ANAC58                     <---------ANAC55(2)                     --------->ANAC58                     --------->ANAC46        <---------YAB1                               <----------                  <------ZmHOX2a(2)          <---------AHL20(2)                           -----------                 --------->ARR11(3)        <---------RVE1(1)                             ------------                 <---------ARR11(3)       <---------ARR14(2)                  --------->CCA1(2)            <---------ANAC46              --------->ARR11(3)                  <------ZmHOX2a(2)     -      --------->AHL20(1)                  <---------ARR11(3)                 <---------ARR11(3)    <-      --------->ARR11(3)                  --------->ARR14(2)                 --------->ARR11(3)  ----      <---------ARR11(3)      <---------ANAC58                               --------->AGP1      <---      <---------AHL20(1)      <---------ANAC58                      --------->TOE2(3)    ------------ -------->AtLEC2<---------GLK1(1)   ------>NtERF2     <----------DOF2       --------->GLK1(1)   -----   acttgcaaaatattgtggagatcacgaaaatgccttgaggcccagatattaatgggcttttaggcccatatgttaatgagatccaaatatttccaagtta  15599600         ----------->TGA1         --------->ICU4  <---------WOX13(1) <------------CBF                              ----------->HVH21 -----AGL15                       --------->TOE2(3) ---->AGL15   --------->At5g28300 --------->YAB1 --------->SPL7 ----->AG----------->HVH21      --------->ARR11(3) -------->ATHB12           --------->WRKY38(1) <---------SPL7                              <---------DAG2 --------AHL20(2)          --------->WRKY12  --------->ANAC55(2)                      <----------DOF2 ----->ANAC55(2)           --------->WRKY45 --------->SPL7          <---------DOF5.7(2) <-----------GT1 ------ANAC55(2)         <----------DOF2  <---------SPL7  --------->AHL20(2)     <<<<<<<<<TBF1    <<< ----->AGL3 <---------DEAR3(1)  <---------ARR11(3)    <---------ETT(2)      <----------DOF2<--------- ---->MYB59 <---------ANAC46   *TSS     <---------------AtSPL3      ---------->DOF2 <----------------   agtaattggtaatgacggtgaaggtgcctttgactatcttaacgcgtacgggacggtcgataaatttagttaaagtctctttcttcttctttactttttc  15599700                                             <---------MYB52(1)                                            --------->TOE2(3)                                       ------>ZmHOX2a(2)              <------NtERF2                                     <---------ARR11(3)              --------->LBD16               <-                                     --------->ARR11(3)             <---------ANAC58               --                                <---------ARR14(2)      --------->ANAC58                --------->At4g35610                                --------->ARR14(2)      --------->ANAC58                <---------At4g35610   <----------DOF2       <---------ANAC46  <---------ANAC58         <---------ANAC46 ---------->DOF2- <<<<<<TBF1 ---------->DOF2   ----------->ARR10         --------->ANAC46      <---------GLK1(1)    <- -DOF2    <------ZmHOX2a(2) <---------ZAT18<---------ANAC46         <---------ANAC58----------->HVH21 --------ANAC81       <---------MYB52(1)   <---------ANAC58        <---------LBD16 --------->LBD16 --   ttcttcttttagatcaaagaaatcgttttgtgcagatttgatcttgcgttaattttctaagcaaaatatggcgggagaagatagccgtgaagctcaacga  15599800                                                                                    --------->ATERF1(1)                                                                                    <------NtERF2                                                                                   ------>NtERF2                                                                                   <---------RAP2.3(1)                                                                                   <---------ATERF1(1)                                                                                   --------->ABI4(2)                                                                                  --------->DEAR3(1)                                                                                  --------->RAP2.3(2)                                                                                  <---------DEAR3(1)                                                                                 --------->RAP2.6(1)                                                                                 --------->RRTF1(1)                                                                                 --------->ORA47(2)                                                            <---------HSFB2a(2)  --------->ERF1                                                          --------->At4g35610    --------->RAP2.3(1)                                                        ------>ZmHOX2a(2)        --------->DEAR4(2)                                                       <------ZmHOX2a(2)         <------NtERF2                                                       --------->ARR14(1)        --------->ATERF1(1)                                                       --------->CCA1(2)        ------>NtERF2                                                      <-----------ARR10         <---------ATERF1(1)                                                      --------->ARR11(3)        <---------RAP2.6(1)                                                      <---------ARR11(3)        <---------ERF1                                                      --------->AGP1            <---------DEAR4(2)                                                      <---------ARR14(2)        <---------RAP2.3(1)                                                      --------->ARR14(2)        <---------RRTF1(1)                                                      --------->ARR14(3)        <---------ORA47(2)            <------ZmHOX2a(1)                         <---------AGP1           --------->ALFIN1     --------->ARR14(2)                               <---------ARR14(3)       <---------RAP2.3(2)     <---------ARR14(2)                             ----------->ARR10          <---------RAP2.6(2) <------NtERF2                                   <------NtERF2                 <---------RRTF1(3) ---------ID1                                   ------>NtERF2                  <---------RAP2.3(3) --------->HVH21                               <---------bZIP60(1)             <---------DEAR3(1)   < ----->NtERF2<---------ARR14(2)               --------->RAP2.6(3)    --------->CCA1(2)         ------ --------DEAR3(1)                            --------->MYB52(1) ---------->DOF2<---------RRTF1(2)<--- ------->DEAR3(1)      ------>ZmHOX2a(1)    ----------->TGA1--------->HSFB2a(2)<---------DREB2C(2)---   ggcgacgaatatgaggaatcgagtcctctcttgaaggtgaacgagaatgacggcaagatctgctcgaaaagagatgccaaggcggcgcctcttgtgcctc  15599900                                      <---------ANAC46                                  <---------ANAC58                             <------NtERF2                             <-------GAMYB           <------ZmHOX2a(1)<---------SPL7      <---------DEAR3(1)    <---------MYB46(3)      <---------ANAC46     <---------ANAC46      --------->ALFIN1    <---------LBD16     --------->ATERF1(1)  <------NtERF2     <------NtERF2       <---------ATERF1(1)     <---------LBD16     <---------ORA47(2)     ------>NtERF2       <---------RAP2.3(1)    <---------ATERF1(1) <---------DEAR3(1)    ------>NtERF2       <---------RAP2.6(2)                     <---------ANAC58   <---------DEAR3(1)   <---------RAP2.3(2)                     <---------ANAC58  --------->LBD16      --------->RAP2.6(3)                  <---------WOX13(1)  <---------LBD16      <---------ORA47(1)<-----------HVH21--------->ATHB12  <------ZmHOX2a(1) --------->ANAC46      --------->SPL7 <---------ANAC58   <---------YAB1  <-----------RAV1(2) ---------LBD16      <---------SPL7<---------GLK1(1)   <---------ANAC58 <------ZmHOX2a(2)          <- >NtERF2<------NtERF2----------->HVH21<---------ANAC58 <---------ANAC46--------->ARR14(2)  --------->GLK1(2) ------ALFIN1<---------ARR14(2)   <---------ANAC58     <---------ANAC58<---------ARR14(2) <---------GLK1(1) --->ZmHOX2a(1) <---------RAP2.6(2)<---------WOX13(1) <-----------------------TaNAC69(2)  --------->GLK1(1)   ctcccgcggcggaggaatacggctggacggcggatggattgcctgtgagccatggtagcgtgattggcgagccgatcaggagaaaccagtggaattctgg  15600000                        <---------YAB1      --------->HSFB2a(2)                      <---------ICU4        <---------HSFB2a(2)                      --------->YAB1       ------>ZmHOX2a(2)                     --------->ICU4       <------ZmHOX2a(2)          <---------ANAC58         --------->At4g35610                                              <          <---------ANAC58         --------->ZAT2                                                   -     <-----------------AGL1        <---------At4g35610                                              <     ----------------->AGL1------->TEIL  --------->ARR11(3)             ----------->GT1             -   <-----------GT1   <---------ATHB12 --------->At4g35610       <-------GAMYB          ----------->GT1 ---------DOF2 ---------->ID1      <---------ZAT2              <---------ANAC46    <---------YAB1   <   tctttttacctgtcttggtcgcaatgatgaattttgcagcagcgatctcgaagtttgtgagtatttcgttgaattcgtataatttctgattgtaatttgt  15600100  Previous    Next  AGI:  At2g37100.1    Description:  protamine P1 family protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G03110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18125.1) Range:  from: 15598180    to: 15599183    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g37110.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G40935.1); similar to unknown [Populus trichocarpa] (GB:ABK96163.1); contains InterPro domain Protein of unknown function Cys-rich (InterPro:IPR006461) Range:  from: 15599631    to: 15601093    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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