Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  --------->ALFIN1                                                              <------MYB83                                                              <---------ANAC46                                                              <------MYB46(1)                                                             <---------DEAR3(1)                                                             --------->MYB111(2)                        --------->DEAR3(1)                   <---------AtMYB61                     --------->ANAC46                   --------->MYB52(1)                <-----------GT1                   --------->ANAC46                              =====            <---------GLK1(2)                    ----------------->AGL3                         -----            --------->ARR11(3)                 --------->ARR14(2)                               ===== ------YAB1 <---------ARR11(3)                 <---------ARR14(2)               <---------ARR11(3) ->TOE2(3)----------->ARR10               --------->ANAC46   --------->ALFIN1   --------->ARR11(3)   acattgtagacgaagatttttcttcgccatccgagtgtttttccacgactatccacaataagggaggtggaactagcctcaaggtattggccattctcct  15595900                              --------->ATHB51                              --------->ATHB12                             --------->ICU4                             <---------YAB1              ------>ZmHOX2a(1)    <---------GLK1(2)                     <----------DOF2                   <---------ZAT18    <---------ANAC58                    ------>ZmHOX2a(2)           --------->YAB1            <---------ANAC58                   <------ZmHOX2a(2)           <---------ATHB12           --------->ANAC55(2)                  <---------ARR11(3)         --------->WOX13(1)      <----------DOF2          <------ ==========================HOX2a_HOX2a       --------->YAB1          <---------DAG2           ------- ->ZmHOX2a(1)     --------->ARR11(3)        --------->MYB46(3)  <-----------HVH21             <------ =========================HOX2a_HOX2a    --------->REM1(1)     --------->bZIP60(1)        <----------DOF2   aagaagaacgtttttgtagcgatctttagttattattggagttacaacaatcactagtcctcttggtgtcacttttacttgattctcatcttctttctcg  15596000      ==================HOX2a_HOX2a      ------>ZmHOX2a(2)     ===================HOX2a_HOX2a     <------ZmHOX2a(2)                           <---------ANAC58    <---------ARR14(3)                          <---------ZAT2    <---------ARR14(2)                          --------->ZAT2    --------->ARR14(2)                    --------->ZAT2    --------->AGP1                    --------->LBD16    <---------ARR11(3)               <---------ANAC46    --------->ARR14(3)              <---------LBD16    <----------DOF2    --------->ARR11(3)          <---------ARR14(2)    <---------ANAC58   <---------GLK1(1)            --------->ARR14(2)    <---------ANAC58                         <-----   --------->GLK1(1)       --------->ANAC46 --------->ALFIN1                                   <-----  ----------->ARR10   <---------GLK1(2)   <---------At4g35610                                  <----- ---LBD16            <---------At4g35610  --------->At4g35610                      <------ZmHOX2a(1) -->HSFB2a(2)        --------->At4g35610  <---------ZAT2                         <---------TOE2(3)  - ---HSFB2a(2)    ------>ZmHOX2a(1)---------->CDC5<---------ANAC58     <---------TOE2(3)      <-------   gagagagatcttgtttctccttcagcttctcgcgactctgcgggagctggagcttggctttgggaattgatcaaggttctattgaggagggaatgttgtg  15596100                            <---------ARR14(2)                     <------MYB83      <---------ANAC58      --------->ARR14(2)      <---------ANAC46     <------ZmHOX2a(1)                                                 <-------      <---------ANAC58<---------ANAC46                                                      <-------- ----ANAC46          <------MYB46(1)      --------->HSFB2a(2)                               --------- ----ANAC58         --------->ALFIN1      <---------HSFB2a(2)                               --------- ----ANAC58        <--------P        --------->GLK1(2)                                  -------->P ------>TEIL       --------->ALFIN1 <---------ARR11(3)                                <---------SPL7 --ANAC46       --------->DAG2      --------->ARR11(3)                             ------>NtERF2<----   tgtatgtagcgttttcaaaaggttggggaggaatcggagattttgtagaagtataagaagtcgtttcgaaattagagaaaaatgaggccttaccagcagg  15596200                                                                                              ------>ZmHOX2a(2)  --------->ANAC58                                                                           <------ZmHOX2a(2)  --------->ANAC58                                                                          <-------- ----RAV1(2)                                       <----------DOF2                ------>ZmHOX2a(2) -ZAT2   --------->ZAT14                         --------->At4g35610            --------->ARR11(3) >ZAT2   <---------ZAT14                         --------->ZAT2             <----------DOF2 --------- >At4g35610                                      <---------At4g35610 <----------DOF2       <---------GLK1(1) --ZmHOX2a(1)                               <------ZmHOX2a(2)      <---------At4g35610     --------->GLK1(1)   agcgaagccagtgaagaaacccattacaaaacatagagagaaatggatcacagctttcttccatacttgagctttcttctttgatctctctagagatccc  15596300                                      <---------ANAC46                                      <---------ANAC58                                      <---------ANAC58                                    *TSS                                  --------->GLK1(1)                                  <---------GLK1(1)                         <---------ANAC58                         <---------ANAC58                                                           <                         <---------ANAC46                                                       -----                    --------->HSFB2a(1)     <---------AHL20(2)                             <---------DAG2            --------->ANAC46 <---------ANAC46      <---------LBD16                      --------->ARR11(3)  ------->GAMYB     <---------HSFB2a(1) <---------MYB52(1)                              <---------ARR11(3) -ARR11(3)  --------->ANAC58 <---------ANAC58 <---------------AGL15             <-----------TBP<----- >ARR11(3)  --------->ANAC58 <---------ANAC58 <---------YAB1                 <---------ZAT6<---------   ataaccctctcttcaaggaagaaggtttcttgagtgagttccgtttttatttttgtggaaaacaaaatgtgtgaagttagtgatatataagagctttatg  15596400                                                                --------->MYB52(2)                                                                <---------MYB46(3)                                                               <---------DEAR3(1)                                                               --------->ALFIN1                                                               <---------AtMYB61                                                             <-------GAMYB                                                            <---------ANAC46                                                        <---------ANAC58                                                        <---------ANAC46         -------->P                                                        <---------ANAC58        ------->GAMYB                                                     <---------WOX13(1)        <---------MYB55(2)                          <---------TOE2(3)        --------->ATHB12    <----------DOF2 <---------MYB46(3)    <---------ANAC46<---------ZAT18                <---------ICU4 <---------AtMYB61    --------->MYB55(2) ------------CBF    --------->ZAT18               --------->ICU4<------MYB83   --------->MYB46(3) ---->YAB1       <---------MYB46(3)               <---------YAB1<------MYB46(1)<---------MYB111(2) ----YAB1  <------------CBF               <---------TOE2(3) <---------ANAC58   <---------MYB52(2) -DOF2   --------->ICU4   <---------TOE1(3)<---------YAB1   <---------ANAC58   <---------MYB111(1)   agaattgtgtagttattgtttgttcgctaaggtaagattattttgatgtttgatgattgcttgcgttggtggtcttttgcaacaaccagttgttgggatt  15596500                                                                 <---------YAB1                                                                 <---------AHL20(2)                                                                <---------AHL20(2)                                                                --------->AHL20(1)                                                                --------->AHL20(2)                                                                <---------AHL20(1)                                                               --------->YAB1                                                              <---------YAB1                    -----                                                             --------->AHL20(2)                 <----                                                             <---------AHL20(2)                ------                                       --------->ATHB12    --------->AHL20(2)                  ------                                       <---------ICU4      <---------AHL20(2)                  ------                                --------->LBD16           --------->YAB1               --------->YAB1                               <---------ANAC55(2)       <---------YAB1<---------MYB52(1)      <-----                               <---------ANAC46         <---------AHL20(1)             --------->TOE2(3)                               --------->ANAC55(2)      <---------AHL20(2)        <---------ATHB12                              <---------LBD16           --------->AHL20(2)<---------ANAC58     ------                             --------->MYB52(1)         --------->AHL20(1)<---------ANAC46    -------                  <---------ARR14(2)   -------->ATHB1  --------->AHL20(2) <---------ANAC58---------->DOF2              <-----------------AG    <---------YAB1   --------->YAB1<---------ICU4  ------->TEIL<---   ggaacacattaactgaaacatatttgggaaattacggaaaatcattgctaaaaacaattatattaatataatcgttgcttactaatgaatcttaatgccg  15596600     <-------TEIL ->NtERF2 -----RAP2.6(3)                                           --------->AHL20(2) --->RAP2.3(2)                                      --------->At4g35610 --->RAP2.3(3)                                     ----------->GT1 --->ATERF1(2)          ------->TEIL               ----------->RAV1(1) ----ATERF1(2)   --------->ALFIN1          <---------ARR14(2)                                -------- --->RAP2.6(2) <---------ANAC46            --------->ARR14(2)  <-------TEIL         <---------YAB1 -->RAP2.3(1)  <---------ANAC58<---------ZAT18   --------->At4g35610               <---------TOE2(3) ---NtERF2     <---------ANAC58--------->ZAT18   <---------At4g35610              <-----------GT1   ccatagattcattttggccgtggatgtatatggagcactaaaccagattggagcagcaaaaaaaattcatcagcatttagacatttacgattttgccaca  15596700                                                                          --------->ALFIN1                                                                      ------>MYB46(1)                                                                      ------>MYB83                                                                    <---------MYB111(1)                                                                    <---------MYB46(2)                           <---------AHL20(2)                       <---------------AGL15                          --------->YAB1                      <---------------AtSPL3                         --------->AHL20(2)     <---------AHL20(2)  --------------->AGL15                      --------->AHL20(2)     --------->AHL20(1)     <---------MYB59                     --------->AHL20(2)      <---------ARR11(3)    <-----------------AGL3                     <---------AHL20(2)      <---------AHL20(1)    ----------------->AGL1                  --------->AHL20(2)         --------->ARR11(3)    ----------------->AG                  <---------AHL20(2)        <---------AHL20(2)<---------------AtSPL8       --------->DAG2 --->RAV1(1)     --------->AHL20(2)  <---------YAB1  --------->ZAT6<-----------------AGL1 ---------->DOF2   gtagtttatctactacttaataaataaataaaaatgtttttgataaatatttttatctctagagagagtacctaatgtggagattagtcttgaaaagtgt  15596800  Previous    Next  AGI:  At2g37090.1    Description:  IRX9 (IRREGULAR XYLEM 9); transferase, transferring glycosyl groups / xylosyltransferase. similar to glycosyl transferase family 43 protein [Arabidopsis thaliana] (TAIR:AT1G27600.2); similar to glycosyl transferase family 43 protein [Arabidopsis thaliana] (TAIR:AT1G27600.1); similar to secondary cell wall-related glycosyltransferase family 43 [Populus tremula x Populus tremuloides] (GB:AAX33319.1); contains InterPro domain Glycosyl transferase, family 43; (InterPro:IPR005027) Range:  from: 15594473    to: 15596336    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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