Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 -------->ATHB1                            <---------AHL20(2)                 --------->ATHB51                            --------->AHL20(2)                 --------->ATHB12                         --------->AHL20(2)                    <---------ICU4         --------->AHL20(2)       <---------ANAC46  <---------AHL20(1)         ------>ZmHOX2a(1)               <---------------AGL15   <---------ANAC58      --------->AHL20(1) <-------TEIL      <---------ATHB51      --------------->AGL15   <---------ANAC58     <---------AHL20(2) --------->CCA1(2)  --------->ICU4 <---------AHL20(2) --->TEIL     <---------TOE2(3)           <---------ARR14(2)  <---------AHL20(2)   --------->YAB1 --------AtSPL8     --------->AHL20(2)    --------->ARR14(2)  --------->AHL20(2)  <---------YAB1   acttagcttgtgtattaagaaactaaatattttaatatgactcagatacatttcctctctctaaattattgttttctgtttattttcataaaatagtaga  15582700                           --------->ARR11(3)                           <---------AHL20(1)               <---------ANAC46                 <---------ICU4                             <---------ANAC58                 --------->YAB1                             <---------ANAC58                --------->ICU4                        <---------MYB59            <---------AHL20(2)  --------->ANAC55(2)  --------->ANAC55(2)                            -            --------->AHL20(2)  --------->YAB1     <-----------GT1             ----------->GT1  <----       <---------AHL20(1)  <---------ARR11(3)  --------->ARR11(3)       <------ZmHOX2a(1)    --------       --------->AHL20(1)  --------->AHL20(1)  <---------ARR11(3)     <---------TOE2(3)  <---------AHL20(2)   agttttaaaaatattaaaatgatcacaaatattttcgtaattgtttatagattttacctatttcttgtattttaggaaaatttgtaaattttaaaatgtt  15582800                                                              <----------DOF2                                                             <---------ANAC58                                                             <---------ANAC58                                                           <-----------GT1      <---------WOX13(1)                                <---------ICU4   <---------AHL20(2)                                  --------->AHL20(1) ---------->GT1                 --------->TOE2(3)      <---------AHL20(2) -----YAB1             <----------DOF2                 --------->AHL20(2)                ------->TEIL --->GT1     --------->TOE2(3)  --------->TOE1(3)     --------->AHL20(2)       --------->YAB1     ---   tatagttaattgaattcttaaataacttttaaaaccctaataagttttcgaaaaaaaaaaattactttccctactatacaataagaaaatgtatcaaaaa  15582900                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                              <------                                                                                              <------                                                                                              <------                                                                                             <------NtERF2                                                                                          <-------MYC2                                                                                          -------->ABF1                                                                                          <-------MYC3                                                                                          ------->MYC3                                                                                          ------->MYC4                                                                                          ------->MYC2                                                                                          ------->PIF5                                                                                  <---------ICU4   <-                                                                                 <---------YAB1  <---                                                                             <---------ARR11(3)  ----                                                              --------------->AGL15       <-------MYC4                                                             <-----------------AGL1      --------->ANAC46                                                             ----------------->AGL2      <---------O2                                                             <-----------------AG--------->ICU4  ----                                                             <-----------------AGL2      --------->O2                                                             ========================================                                                             ========================================          <---------AHL20(2)                                 ----------------->AGL3      ============         --------->AHL20(2)                                  <-----------------AGL3      --------->TGA1a         --------->YAB1                                --------->DAG2        --------->ARR11(3)<-----     <---------AHL20(2)                               =============================================bZIP_DOF     --------->AHL20(2)                            --------->YAB1           --------->YAB1<-------PIF5    --------->AHL20(1)                          --------->YAB1<---------------AGL15      --------->ANAC55(2)    --------->AHL20(2)              --------->DAG2--------->ICU4          <---------TOE2(3)--------->ALFIN1    <---------AHL20(2)            <---------AHL20(2)  ---------->DOF2    ==========================bZIP_DOF ------>YAB1        ---------->DOF2---------->DOF2<---------YAB1         ---------->DOF2 <---------TGA1a   tcaaaatttaataaaaatgaataaaagtaaacttatataaagggattgaataataataaagttccccttaatggttaaagataatgaatacacgtggcgt  15583000       ----------->GT1       <------MYB83       <------MYB46(1)      --------->MYB111(1)      --------->MYB59   --------->ARR14(2)   <---------ARR14(2) -------->HSFB2a(2) -------------->AGL15 ---------------AGL15 ---------HSFB2a(2) --------LBD16 ----------------AG ----------------AGL2 ---ANAC58 ---ANAC46                                                               ----------->GT1 ---ANAC58                                                             ---------->DOF2 ----------------AGL1                                             <---------YAB1 ------ARR14(2)                                                   ----------->GT1 ----->GLK1(2)                               --------->AHL20(2) --------->At4g35610 ----->ARR14(2)                      ---------->DOF2            <---------At4g35610 ------>MYB83 ===============MADS_MADS        --------->AHL20(2)            --------->ALFIN1     ------>MYB46(1) ================MADS_MADS      <---------AHL20(2)      <---------MYB52(2)        --------->TOE2(3) =====bZIP_DOF            ----------->GT1 ----------->GT1 --------->MYB52(1)      <---------MYB59 --- -----DOF2         ------->TEIL --------->AHL20(2)    --------->MYB52(1)--------->DAG2    -----------   ttctggatttggtagaatatgaaccagagagaaaataaataaagagattaaaaaaaaaacgaacggtgctgataaaagtgaaaacctaatctctcaatcg  15583100                                                                                                   <-                                                                                               ------                                          *TSS                                              ---------                                     --------->WOX13(1)                                    --------->MYB46(3)                                   <---------ATHB12                                        <---------ATHB12                                   ==================HOX2a_HOX2a                          --------->ANAC46         <---------CCA1(2)         <------ZmHOX2a(2)      ------>ZmHOX2a(2)------>NtERF2 --------->WOX13(1)         --------->At4g35610   --------->SPL7             ===================================HOX2a_HOX2a     <-----------HVH21       <-----------HVH21===================HOX2a_HOX2a  ------>ZmHOX2a(1)<----- ------>DEAR3(1)  <----------DOF2  ------------>CBF       ===========================HOX2a_HOX2a----- ->CBF   <---------At4g35610 <---------SPL7   ------>ZmHOX2a(1)         ------>NtERF2 ------>ZmHOX2a(1)   cagacgttgtcatctctcttcttttctcaagcgtccgatcaatctctcctcttctctcgatctctctccctctctgcctcctctcttcctccaatcaaca  15583200                       <----------DOF2         --------->WOX13(1) --------ALFIN1        <---------DAG2        <---------ATHB12                                    <--- --->MYB46(3)      ------>NtERF2           --------->WOX13(1)                 <---------ANAC58   <--- >YAB1            --------->ANAC46     ----------->GT1                        <---------ANAC58  <---- ----MYB52(2)     --------->ANAC58    --------->HSFB2a(2)                --------->ATHB12   <-------- -->GAMYB         --------->ANAC58    <---------HSFB2a(2)               <-------TEIL       <---------   aacacctctctgtttcactcccgccctttttcgaattcttctggtaaatcaatcttctctctcaacttctctgattcattgcttcatttcaattttcccc  15583300    <-----------ARR10    <---------ARR11(3)    <---------ARR11(1)    --------->ARR11(3)   <---------CCA1(2) -------DOF2                                      --------->ATHB12 ------DAG2                                    <-------GAMYB -----DAG2                                    <-----------RAV1(1)                         <---------TOE2(3) ---GT1                       <------------------------ANAC81                      ---------->DOF2  < --GT1        <------ZmHOX2a(1)       ---------->ID1                  <---------ZAT6      <---------TOE1(3)   ttttcatatcttattaggatgtgttttgtctctgattttcttcgttttctgttgatgggttttgtctattttgtgttaattgttgtaaagttagggtttt  15583400                         --------->ANAC58                         --------->ANAC58                                                      <-----                       --------->ATERF1(1)                                           <-------GAMYB                    --------->ATERF1(1)                                 ---------->DOF2       <------                   <-----------HVH21              --------->ANAC58    <------ZmHOX2a(2)  <---------ANAC55(1)                  --------->ARR14(2)              --------->ANAC58   <---------ARR11(3)  <---------ANAC55(2)                 <------NtERF2                --------->ALFIN1       --------->ARR11(3)  --------->ANAC55(2)                 --------->ATERF1(1)       <---------DEAR3(1)   --------->ALFIN1    <---------MYB46(3)              <---------LBD16         --------->LBD16           <---------ANAC46    ----------->GT1            --------->ALFIN1         --------->HSFB2a(2)      <---------MYB46(3) <---------ZAT2<-----   <----------DOF2<---------ARR14(2) <---------HSFB2a(2)     <---------AtMYB61  <---------TOE1(2) -----------GT1<---------ANAC46     <---------LBD16          --------->ALFIN1  <-----------RAV1(2)   tttttctttctgagatggcggagtcgcaggccaagagtcccggaggctgtggaagccatgagagtggtggagatcaaagtcccaggtcgttacatgttcg  15583500                                                  --------->ARR11(3)                                                  <---------ARR11(3)                   <---------MYB52(1)       ---------->DOF2      ----------->GT1                 <---------YAB1        --------->YAB1    <---------------AGL15        <------MYB83                 <---------ARR11(1)  ------>ZmHOX2a(1)  ---------->DOF2 ----ANAC58  <---------ANAC58       <---------CCA1(2)    --------------->AGL15                      < -TEIL  <------MYB46(1)    --------->YAB1<---------YAB1 <-----------------AGL2          <------ZmHOX2a(1) ----ANAC58  <---------ANAC58     --------->RAP2.6(2)   <-----------------AGL1        <---------TOE2(3)   tgagcaagataggtttcttccgattgctaacataagccgtatcatgaaaagaggtcttcctgctaatgggaaaatcgctaaagatgctaaggagattgtg  15583600  Previous    Next  AGI:  At2g37060.1    Description:  CCAAT-box binding transcription factor, putative. Identical to Nuclear transcription factor Y subunit B-8 (NFYB8) [Arabidopsis Thaliana] (GB:Q8VYK4;GB:Q9ZQC3); similar to transcription factor [Arabidopsis thaliana] (TAIR:AT3G53340.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69013.1); contains InterPro domain Transcription factor, NFYB/HAP3, conserved site; (InterPro:IPR003956); contains InterPro domain Transcription factor CBF/NF-Y/archaeal histone; (InterPro:IPR003958); contains InterPro domain Transcription factor, CBFA/NFYB, DNA topoisomerase; (InterPro:IPR003957); contains InterPro domain Histone-fold; (InterPro:IPR009 Range:  from: 15583142    to: 15584956    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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