Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           --------->AHL20(2)                         <---------AHL20(2)                         <---------AHL20(1)                         --------->AHL20(1)                     --------->ICU4                    --------->At5g28300           <<<<<<<GRF7                 <---------ZAT18                ------>ZmHOX2a(1)                 --------->ZAT18          <---------AHL20(2)                 --------->ZAT14      <---------AHL20(2)          --------->ZAT18 ---------ARR11(3) ----------->GT1    --------->AHL20(2)         --------->ANAC58 -------->GLK1(2)<-------TEIL<-----------GT1  <---------ICU4     --------->ANAC58 --------GLK1(2) <---------ZAT14--------------->AGL15    ----------->GT1--------->REM1(1)---------->DOF2   agaatctttttaaactaggtgcagtaattaattaccatatttatataatcctgacaaaatagtaaaaacgcactacaactaaaacgtagccaaaagctat  15541900                                                                            <---------YAB1                                                                          <---------AHL20(2)                                                                          --------->AHL20(2)                                                                         <---------AHL20(1)                     --------->ANAC58                                    --------->AHL20(2)                     --------->ANAC46                 ------->TEIL       <---------AHL20(2)       ------->GAMYB --------->ANAC58          --------->ANAC55(2)    --------->AHL20(2)      <---------MYB52(2)                       <---------ANAC55(2)----------->GT1      --------->MYB46(3)    <-----------GT1   <-------TEIL --------->AHL20(2)    --------->AHL20(2)   ccatttcaacaaacaaaacaaacacacaattttcaatcttctctaatatacgtatgcacattaatatgtagataaattatttttaaaatatgaagataac  15542000                                                      <---------At4g35610                                        --------->ARR14(2)                                        <---------ARR14(2)                                      <---------MYB46(3)   <---------MYB52(2)                                   <---------ANAC46   <------NtERF2                                   <---------ANAC58   --------->At4g35610                                   <---------ANAC58  ------>NtERF2                               <---------ANAC58      --------->ANAC58                               <---------RAP2.6(2)  <---------ATERF1(2)                  <---------ATHB12 <---------MYB46(3)--------->ANAC58           ---------->DOF2     <---------ANAC58<---------ANAC58                       ----------->GT1     --------->YAB1--------->YAB1 --------->ALFIN1  --------->ATERF1(2)      ------->GAMYB  <---------------AGL15    <----------DOF2     <---------ANAC58           --------->MYB52(1)     ----   aatccaataagaagaaagtaatcaagagtctttgcggtcgtggttctggtcgtgccagcaaactaacatggcgatacaacggcgaagaatgtaaaacttg  15542100                                                         ------->MYC2                                                         <-------MYC4                                                         ------->MYC3                                                         ------->MYC4                                                         ------->PIF5                                                         <-------PIF4                                                         <-------PIF5                                                         <-------MYC3                                                         <-------MYC2                                                         ------->PIF4                                                        =============================================                                                        <---------TGA1a                                                        --------->ANAC46                           <----------DOF2              <---------O2                           =======================================bZIP_DOF                           <---------DAG2               <---------ANAC55(2)                        <---------ALFIN1                --------->TGA1a                       <---------ZAT14                  --------->ANAC55(2)                       <---------ZAT18                  --------->O2             --------->ATHB12                       --------->ZAT14                <---------ALFIN1      <------NtERF2                       <------NtERF2                  <------------OsbHLH66------>NtERF2                       --------->ZAT18         --------->ANAC58         --------->At4g35610                    --------->RAP2.6(3)        --------->ANAC46         --------->LBD16             --------->ANAC46                  --------->ANAC58         <---------At4g35610             --------->ANAC58                <---------AtLEC2         <---------LBD16 <----------DOF2<---------bZIP60(2) ==============================bZIP_DOF --------->ABI4(2)  <------ ------>ID1  --------->ANAC58       ---------->DOF2----------->HVH21 ------>ZmHOX2a(1)      <--------   gctctttgtttcttcacgacatggctgcacttttgcccaaaagtcttgcacggctcacacgtgccattctcctccggtgccattgatttgtttctgctct  15542200                                                                                               <-----                                                                                            <--------                                                                                          <----------DOF2                                                                                        --------->At4g35610      <---------ETT(1)       --------->ANAC58                                         <---------ZAT18 ====bZIP_DOF         --------->DAG2                                             <---------ANAC58   - ----DOF2 --------->AtMYB61  --------->ANAC58       ----------->GT1              <---------ANAC58   < -At4g35610          ---------->DOF2            <-----------GT1        *TSS    --------->ARR11(3)  <-   tagtgagtccgaccaaaatataaaaaagtgcaagaaatggaagagttttttttctagttaaaaggcttaagaaatggaagagttcttgtgagctttatat  15542300  <---------ANAC46                                                   <------NtERF2 -------CBF ---------->DOF2          ----------->GT1              --------->ATERF1(1) ---TBP   ----------->HVH21          <---------ANAC46           <---------ANAC46 -------->ZAT14            --------->CCA1(2)                 --------->ALFIN1     --------->YAB1 ---------ZAT14   <----------ID1   <---------ZAT14     <-----------HVH21         <---------YAB1 --------ANAC46 <---------------AtSPL8     <-----------GT1 <---------O2 ---------->DOF2     ---------   tgtgtagtagaggtgaaagagggacaaagatagagagtttagtatatactatatagtcgtcaagtggagggggcaaaagcattatcaaaaacccaaaagt  15542400                                                       <---------AHL20(2)                        ----                                                     <---------AHL20(2)                          <---                  --------->TOE2(3)    --------->MYB52(1)                     <---------AHL20(2) <---   <---------ANAC58                    <---------ARR14(2)                  ----------->GT1      <----   <---------ANAC58                    --------->ARR14(2)        --------->KAN4(2)             <----- ->DOF2     --------->AHL20(2) <---------YAB1      <---------AHL20(2)   <----------DOF2       <------   atgtttcttacaaattaaaacctatattggactatgaaacaaaaccgctacatatattttttgagtttattcttctttagttaattttagtttgtggatt  15542500           <---------MYB52(1)      ------------>MYB.PH3(1)    ---------->DOF2         <---------ARR14(2) ------->GT1           ----------->GT1                                                      <-------TEIL ---MYB46(1)  <------MYB83---------->TaMYB80                 ----------->GT1                ------->TEIL ---MYB83 <---------RAP2.6(3)                         --------->TOE2(3)                 <------------ -----AtMYB61 <------MYB46(1)                       <---------YAB1                  <---------AHL20(1) ----WOX13(1)--------->MYB59--------->ARR14(2)   <---------AHL20(2)                 --------->AHL20(1) ---ARR14(2)<---------MYB55(1)<-------TEIL       <---------YAB1                    --------->AHL20(2)   ggttttaaaagccgttaggtttagagggaaaatacgtttgaagttttttatattattcttaatttgtaattagacaatgttcaaaatatatatgtacgtt  15542600                      --------------------->WRI1                     <---------ANAC46                     <---------ANAC58                     <---------ANAC58                 <-------GAMYB                                   <-----------GT1                <-----------RAV1(1)                     <---------AHL20(2)                --------->ALFIN1                       <---------AHL20(2)              <---------ANAC46                         --------->AHL20(2)              <---------ANAC58                     <---------AHL20(2)        <---------YAB1<----------DOF2              --------->AHL20(2)       --------->TOE2(3)                          <---------AHL20(2)     --------->ARR11(3)                           --------->AHL20(2)     --------->YAB1     ---------     <---------ARR11(3)                           <---------AHL20(1)    <---------YAB1      --------- ---AtSPL8    <---------ANAC58                    --------->AHL20(1) <----------DOF2   --------->LBD16   gtagataaatcttattgtgtgttgcttttgaattttcgaatacaacttaaaatttaattaaatctatttatcttttgataactaaaatcccgaattgtaa  15542700                                                                               ---------->DOF2                                                                             <---------YAB1                                                                          --------->ICU4                          -------->HAHB4                                  <---------YAB1                          --------->YAB1                                --------->YAB1                 --------->TOE1(2)                                     --------->MYB46(3)                 --------->TOE2(2)                    <---------ICU4   <---------ATHB12              <<<<<<<ZML2--------->ICU4              --------->ICU4   -------->P           --------->HSFC1(1)               <---------TOE2(3)         ------>MYB46(1)           --------->HSFB2a(2)              <---------TOE1(3)         ------>MYB83 -->GT1    <---------HSFC1(1)            <---------AHL20(2)         --------->MYB46(3) >YAB1     <---------HSFB2a(2)      <---------YAB1 --------->YAB1   --------->AtMYB61   tttagactaatctctagaacctatgaaatgatggtattcttattttaaggtgttcataatgagttaatgaccaaccatgatcaaagtcacaatggcactc  15542800  Previous    Next  AGI:  At2g36985.1    Description:  ROT4 (ROTUNDIFOLIA4). similar to DVL20/RTFL1 (ROTUNDIFOLIA 1) [Arabidopsis thaliana] (TAIR:AT3G53232.1); contains InterPro domain DVL (InterPro:IPR012552) Range:  from: 15541858    to: 15542271    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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