Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                    -                                                                                                    -                      <---------SPL7                                                                <                --------->MYB52(2)                                                           --------    <-----------GT1 --------->MYB59                                          --------->WOX13(1)  ---- ----->TEIL <---------MYB46(3)                        ----------->GT1       <-------TEIL    ---------   gaattttaacttgtttgttagtgaggtccgaaatagaatagaaactaaattgtgtaatgtaaatggactagaaataagtccatcaaactaaacaatgaaa  15537800                                                                                                 ----                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                          <---------AtMYB61                                                 <---------ICU4                        <---------YAB1                                                 --------->YAB1                       --------->AHL20(1)              <---------YAB1         <---------MYB52(1)                              --------->ATHB51             --------->AHL20(2)   <------------MYB.PH3(1)                            -------->ATHB1  --------->ARR11(3)             -------->P     --------->ICU4                       <--------HAHB4  --------->AHL20(1)             <---------At5g28300                                 --------->YAB1  <---------AHL20(1)        <-----------GT1     <---------ATHB12                     <---------ICU4 ---------AHL20(1)      --------->ICU4         ------>MYB46(1)                       --------->AHL20(2) -------->ARR11(3)    --------->AHL20(2)      --------->WOX13(1)                     <---------AHL20(2) -------->AHL20(1)   <---------AHL20(2)   <-----------GT1                           --------->ICU4 ---------ARR11(3)   --------->AHL20(2)--------->MYB52(2) --------->AHL20(2)        <---------ATHB12 ->YAB1      <---------AHL20(2) --------->MYB52(1) <---------YAB1   <---------MYB52(1)<---------AHL20(2) ----->AHL20(2)  <---------YAB1 <-----------GT1------>MYB83    <-----------GT1      <---------ATHB51< -->GT1    <---------YAB1<---------ICU4<---------MYB46(3) <---------AHL20(2) <-----------GT1  -------   aaaatattttgttatttttataaataatttttactaaccgtttgttaccaatcatgacaattttttaactgttcgtttttaactcaattattttggtcgg  15537900                                                                           ------------>CBF                                                                          --------->ANAC58                                                                          --------->ANAC58                                                                       <---------ZAT18                                                                       --------->ZAT14                                                                    <---------At4g35610                                                                    --------->At4g35610 <---------MYB52(1)                                                <-----------RAV1(1) ----->SPL7                                                     <----------DOF2 ----SPL7                 --------->WOX13(1)              <---------ARR14(2) ----->HVH21            <---------ATHB12                  --------->ARR14(2) ----DEAR3(2)         --------->WOX13(1)                ----------->GT1<---------At4g35610 ---------SPL7       --------->MYB46(3)                 <---------MYB46(3)--------->ANAC46 -->ETT(1)      <-----------GT1        <---------MYB52(1)--------->At5g28300   accgtatggttagcatattaacaacaatcaatctctaaaccggtatcgaaccgattagcggttatacttttgctgcacacaattcaactctgacttatgc  15538000                                                  <---------ANAC58                                                  <---------ANAC46                       --------->ARR11(3)      <---------WOX13(1)                       --------->AHL20(1)     <---------ANAC58                       <---------AHL20(1)     <---------ANAC58                       <---------ARR11(3)     <------------CBF                     ------->TEIL         <------------CBF  <------------CBF                  <---------YAB1    ----------->GT1      <----------DOF2             --------->ANAC58       --------->ANAC58   <-----------------AGL1    ----------->GT1             --------->ANAC58       --------->ANAC58<---------MYB52(1)    --------->LBD16           <------ZmHOX2a(1)      ---------->DOF2 <---------ANAC58      <---------LBD16       -------         <---------TOE2(3)     <---------ZAT6--------->ATHB12   ------------>CBF <---------ZAT6  ----   aactctgttttgaggaagctatgaatatttttagtgaaaagcaaaattgattgcgtttgctatattggcaatgccacggagaagtgttaattcgtctgat  15538100                                          ----------->RAV1(1)                      --------->ANAC46                                        <------ZmHOX2a(2)                  <---------ANAC58                                <-----------HVH21                          <---------ANAC58        -- ---->GT1                   <----------DOF2                           --------->MYB52(2)<------NtERF2 ----->AHL20(2)      --------->WOX13(1)--------->AGP1   <----------DOF2<----------DOF2 ------>NtERF2   aaaatgcagtttgggaatcaaatctatcaacttttgtcacagatcaacataagcttcactttcttctctggttctttgcttatccatggcaccggttcaa  15538200                                                                          <----------DOF2                                                                      <---------ANAC58              <                                                                      <---------ANAC58              -             --------->YAB1                                           <---------ANAC46  <-----------HVH21 ------->AtLEC2<---------YAB1                     <-------TEIL   --------->ATHB12     --------->MYB59   catgcagaaggtatatgatgactcgatgagtttgcccaaatgtctgttttggttcgtcttacttcaaagattgcgtctttggcaaaatcaggtcgcatag  15538300                                               <------NtERF2                                               --------->ALFIN1                                             <---------ANAC46          --------->ANAC55(2)                <---------bZIP60(2)          <---------At4g35610                <---------O2        <---------MYB55(1)                   <---------ANAC58        <-----------RAV1(2)               --------->ALFIN1       <---------MYB52(1)           --------->ARR11(3)      <-----------HVH21             --------->ARR14(2)     --------->ANAC46               <---------ARR11(3)     --------->ANAC58     ----------->RAV1(2)<---------ANAC58     --------->ANAC58     ==========================RAV  <---------ZAT18      --------->GLK1(1)<-----------RAV1(1)  --------->ZAT18  --------->ANAC46 <---------GLK1(2)                                         ------- -------PIF5      <---------LBD16   <---------ARR14(2)                                        ------- ------>PIF5--------->ALFIN1      ----------->ARR10                                         <------ZmHOX2a(1)   caagtgcccgtcaggtgttcgacggaatgcctgagctagatactgtggcgtggaacaccatgttgacgagctattctcgtttgggtttacatcaggaagc  15538400                                <----------CDC5                            ------>NtERF2                           --------->DEAR3(1)                      --------->GLK1(2)                     <---------GLK1(2)    --------->ICU4                   ----------->ARR10      <---------YAB1               <---------ZAT2 --------->ANAC58                                             ----------        --------->ZAT14    --------->ANAC46<---------ICU4                    <---------ANAC58     <-- -->ANAC58     --------->ZAT2 --------->ANAC58 --------->KAN4(2)    <---------ZAT18       ----------- -->ANAC58 --------->ANAC46----------->HVH21 <---------YAB1    --------->YAB1<---------ANAC58 <------   tatagctctgttcacccagttgagattctccgacgctaagcctgatgattattcgtttacagcaatcttgagcacttgtgcgagtctagggaatgttaaa  15538500                                                            -------->HAHB4                                                            <--------ATHB1                                                            <---------ICU4                                                           --------->ICU4                                                      <-------GAMYB                                                     --------->LBD16                    <---------ZAT14 ->GT1     <-------TEIL                              ----------->GT1                    --------->ZAT18 -------LBD16                                      <---------LBD16                      --------->ZAT14 >GT1     --------->GLK1(2)                    <----------DOF2                      --------->MYB111(1) ---AHL20(2)     <----------DOF2            <----------DOF2<---------ATHB51        <--------P   ttcggaagaaagattcagtctttagttattcggtctgggttttgtgcttctttgccggttaataattcgcttattgacatgtatggtaagtgctctgata  15538600                                  ----------->HVH21                                  <---------YAB1                                <---------ANAC46                         --------->CCA1(2)                                 <---------ANAC58                        --------->ARR14(2)                             <---------ANAC58                        <---------ARR11(3)                             <---------ANAC58                     <---------HSFB2a(2)                          <---------DAG2           ---------->DOF2    --------->At4g35610           <---------At4g35610        --------->ANAC58<---------ARR14(2)                  <---------ZAT18<---------ANAC58        --------->ANAC58--------->ARR11(3)                  --------->At4g35610       --------->At4g35610     <---------ZAT18 --------->HSFB2a(2)         ----------->GT1  <----------DOF2   ------->TEIL   ctcttagcgcaaacaaagtgtttcgagatatgtgctgtgatagtagaaatgaagtaacttggtgctcacttttgtttgcctacatgaatgctgaacagtt  15538700  Previous    Next  AGI:  At2g36970.1    Description:  UDP-glucoronosyl/UDP-glucosyl transferase family protein. similar to glycosyltransferase family protein [Arabidopsis thaliana] (TAIR:AT2G28080.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18188.1); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) Range:  from: 15536085    to: 15537828    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g36980.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT2G22070.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71036.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 15538240    to: 15540344    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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